| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-51 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-46 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-32 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-48 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-24 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-21 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-40 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-3 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-56 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-60 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-65 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-33 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-34 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-50 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_00085#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00085#construct-template-57 |
| http://purl.uniprot.org/unirules/MF_00085#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00085#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00085#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00085#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00085#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00085#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:32679 up:source unirule:MF_00085 .
_:32680 up:source unirule:MF_00085 .
_:32681 up:source unirule:MF_00085 .
_:32682 up:source unirule:MF_00085 .
_:32683 up:source unirule:MF_00085 .
_:32684 up:source unirule:MF_00085 .
_:32685 up:source unirule:MF_00085 .
_:32686 up:source unirule:MF_00085 .
_:32687 up:source unirule:MF_00085 .
_:32688 up:source unirule:MF_00085 .
_:32689 up:source unirule:MF_00085 .
_:32690 up:source unirule:MF_00085 .
_:32691 up:source unirule:MF_00085 .
_:32692 up:source unirule:MF_00085 .
_:32693 up:source unirule:MF_00085 .
?this up:alternativeName ?name1 ,
?name2 ;
up:annotation ?annotation4 ,
?annotation5 ,
?annotation7 ;
up:classifiedWith GO:0003743 ,
GO:0005737 ,
GO:0006413 ,
keyword:385 ,
keyword:396 ,
keyword:648 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:fullName 'Translation initiation factor 5A' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Hypusine-containing protein' ;
rdf:type up:Structured_Name .
?name2 up:fullName 'eIF-5A' ;
rdf:type up:Structured_Name .
?gene3 skos:prefLabel 'eif5a' .
?annotation4 a up:Function_Annotation ;
rdfs:comment 'Functions by promoting the formation of the first peptide bond.' .
?annotation5 a up:Subcellular_Location_Annotation .
?annotation5li6 up:cellularComponent .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the eIF-5A family.' .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
rdf:type up:Modified_Residue_Annotation ;
rdfs:comment 'Hypusine' .
?pfsb10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
_:32694 a rdf:Statement ;
up:attribution _:32679 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:32695 a rdf:Statement ;
up:attribution _:32680 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:32696 a rdf:Statement ;
up:attribution _:32681 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name2 .
_:32697 a rdf:Statement ;
up:attribution _:32682 ;
rdf:subject ?gene3 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene3 .
_:32698 a rdf:Statement ;
up:attribution _:32683 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:32699 a rdf:Statement ;
up:attribution _:32684 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:32700 a rdf:Statement ;
up:attribution _:32685 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:32701 a rdf:Statement ;
up:attribution _:32686 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:32702 a rdf:Statement ;
up:attribution _:32687 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:396 .
_:32703 a rdf:Statement ;
up:attribution _:32688 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:648 .
_:32704 a rdf:Statement ;
up:attribution _:32689 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:385 .
_:32705 a rdf:Statement ;
up:attribution _:32690 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0003743 .
_:32706 a rdf:Statement ;
up:attribution _:32691 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006413 .
_:32707 a rdf:Statement ;
up:attribution _:32692 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:32708 a rdf:Statement ;
up:source unirule:MF_00085 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:32709 a rdf:Statement ;
up:attribution _:32693 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00085
#Rule MF_00085 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00085 .
?thisOrganism rdfs:subClassOf+ taxon:2157 .
BIND(URI(CONCAT(STR(?this), '#MF_00085a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00085a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00085a2')) AS ?name2) .
BIND(URI(CONCAT(STR(?this), '#MF_00085a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00085a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_00085a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch18 faldo:location ?templateMotifSequenceMatchRegionP2846119 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP2846121 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP28461MF_0008514 .
?templateMotifSequenceMatchRegionP2846119 faldo:begin ?templateMotifSequenceMatchBeginP2846120 .
?templateMotifSequenceMatchBeginP2846120 faldo:position ?templateMotifSequenceMatchBeginPositionP2846115 ;
faldo:reference isoform:P28461-1 .
?templateMotifSequenceProfileAlignmentOperationP2846121 edam:has_input signature:MF_00085 ;
rdf:type edam:operation_0300 .
?targetMotifMatch22 faldo:location ?targetMotifMatchRegionMatch23 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0008525 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP28461MF_0008516 .
?targetMotifMatchRegionMatch23 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0008524 .
?targetMotifMatchRegionMatchBeginMF_0008524 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0008517 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0008525 edam:has_input signature:MF_00085 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP28461MF_0008514, 1, (STRLEN(?templateMotifCigarP28461MF_0008514) - STRLEN(REPLACE(?templateMotifCigarP28461MF_0008514, CONCAT('^(?:-*[^-]){', STR(((36 - ?templateMotifSequenceMatchBeginPositionP2846115) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP28461MF_0008516, 1, (STRLEN(?targetMotifMatchCigarP28461MF_0008516) - STRLEN(REPLACE(?targetMotifMatchCigarP28461MF_0008516, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP28461MF_0008516, 1, (STRLEN(?targetMotifMatchCigarP28461MF_0008516) - STRLEN(REPLACE(?targetMotifMatchCigarP28461MF_0008516, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) .
BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0008517) - 1) AS ?thisPositionOn12) .
BIND(?thisPositionOn12 AS ?thisPositionOn13) .
BIND(?this AS ?pfs1t28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn12, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_00085a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_00085 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00085#construct |
