| http://purl.uniprot.org/unirules/MF_00153#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00153#construct-template-33 |
| http://purl.uniprot.org/unirules/MF_00153#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00153#construct-template-49 |
| http://purl.uniprot.org/unirules/MF_00153#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00153#construct-template-54 |
| http://purl.uniprot.org/unirules/MF_00153#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00153#construct-template-48 |
| http://purl.uniprot.org/unirules/MF_00153#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00153#construct-template-41 |
| http://purl.uniprot.org/unirules/MF_00153#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00153#construct-template-8 |
| http://purl.uniprot.org/unirules/MF_00153#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00153#construct-template-52 |
| http://purl.uniprot.org/unirules/MF_00153#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00153#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_00153#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00153#construct-template-50 |
| http://purl.uniprot.org/unirules/MF_00153#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00153#construct-template-35 |
| http://purl.uniprot.org/unirules/MF_00153#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00153#construct-template-57 |
| http://purl.uniprot.org/unirules/MF_00153#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00153#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_00153#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00153#construct-template-53 |
| http://purl.uniprot.org/unirules/MF_00153#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00153#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00153#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00153#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00153#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00153#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:60316 up:source unirule:MF_00153 .
_:60317 up:source unirule:MF_00153 .
_:60318 up:source unirule:MF_00153 .
_:60319 up:source unirule:MF_00153 .
_:60320 up:source unirule:MF_00153 .
_:60321 up:source unirule:MF_00153 .
_:60322 up:source unirule:MF_00153 .
_:60323 up:source unirule:MF_00153 .
_:60324 up:source unirule:MF_00153 .
_:60325 up:source unirule:MF_00153 .
_:60326 up:source unirule:MF_00153 .
_:60327 up:source unirule:MF_00153 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ,
?annotation6 ,
?annotation7 ;
up:classifiedWith GO:0034038 ,
keyword:386 ,
keyword:520 ,
keyword:808 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.5.1.46' ;
up:fullName 'Probable deoxyhypusine synthase' ;
up:shortName 'DHS' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'dys' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue.' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 up:cofactor chebi:57540 ;
rdf:type up:Cofactor_Annotation .
?annotation6 a up:Pathway_Annotation ;
rdfs:comment 'Protein modification; eIF5A hypusination.' .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the deoxyhypusine synthase family.' .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Nucleophile' .
?pfsb10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
_:60328 a rdf:Statement ;
up:attribution _:60316 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:60329 a rdf:Statement ;
up:attribution _:60317 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:60330 a rdf:Statement ;
up:attribution _:60318 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:60331 a rdf:Statement ;
up:attribution _:60319 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:60332 a rdf:Statement ;
up:attribution _:60320 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:60333 a rdf:Statement ;
up:attribution _:60321 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:60334 a rdf:Statement ;
up:attribution _:60322 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:60335 a rdf:Statement ;
up:attribution _:60323 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:386 .
_:60336 a rdf:Statement ;
up:attribution _:60324 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:60337 a rdf:Statement ;
up:attribution _:60325 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:520 .
_:60338 a rdf:Statement ;
up:attribution _:60326 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0034038 .
_:60339 a rdf:Statement ;
up:source unirule:MF_00153 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:60340 a rdf:Statement ;
up:attribution _:60327 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00153
#Rule MF_00153 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00153 .
?thisOrganism rdfs:subClassOf+ taxon:2157 .
BIND(URI(CONCAT(STR(?this), '#MF_00153a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00153a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_00153a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00153a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_00153a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_00153a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch18 faldo:location ?templateMotifSequenceMatchRegionQ5822419 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ5822421 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ58224MF_0015314 .
?templateMotifSequenceMatchRegionQ5822419 faldo:begin ?templateMotifSequenceMatchBeginQ5822420 .
?templateMotifSequenceMatchBeginQ5822420 faldo:position ?templateMotifSequenceMatchBeginPositionQ5822415 ;
faldo:reference isoform:Q58224-1 .
?templateMotifSequenceProfileAlignmentOperationQ5822421 edam:has_input signature:MF_00153 ;
rdf:type edam:operation_0300 .
?targetMotifMatch22 faldo:location ?targetMotifMatchRegionMatch23 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0015325 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ58224MF_0015316 .
?targetMotifMatchRegionMatch23 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0015324 .
?targetMotifMatchRegionMatchBeginMF_0015324 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0015317 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0015325 edam:has_input signature:MF_00153 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58224MF_0015314, 1, (STRLEN(?templateMotifCigarQ58224MF_0015314) - STRLEN(REPLACE(?templateMotifCigarQ58224MF_0015314, CONCAT('^(?:-*[^-]){', STR(((303 - ?templateMotifSequenceMatchBeginPositionQ5822415) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58224MF_0015316, 1, (STRLEN(?targetMotifMatchCigarQ58224MF_0015316) - STRLEN(REPLACE(?targetMotifMatchCigarQ58224MF_0015316, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58224MF_0015316, 1, (STRLEN(?targetMotifMatchCigarQ58224MF_0015316) - STRLEN(REPLACE(?targetMotifMatchCigarQ58224MF_0015316, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) .
BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0015317) - 1) AS ?thisPositionOn12) .
BIND(?thisPositionOn12 AS ?thisPositionOn13) .
BIND(?this AS ?pfs1t28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn12, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_00153a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_00153 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00153#construct |
