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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00166#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00166#construct-template-11 |
| http://purl.uniprot.org/unirules/MF_00166#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00166#construct-template-2 |
| http://purl.uniprot.org/unirules/MF_00166#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00166#construct-template-12 |
| http://purl.uniprot.org/unirules/MF_00166#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00166#construct-template-51 |
| http://purl.uniprot.org/unirules/MF_00166#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00166#construct-template-4 |
| http://purl.uniprot.org/unirules/MF_00166#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00166#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00166#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00166#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00166#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00166#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:66078 up:source unirule:MF_00166 . _:66079 up:source unirule:MF_00166 . _:66080 up:source unirule:MF_00166 . _:66081 up:source unirule:MF_00166 . _:66082 up:source unirule:MF_00166 . _:66083 up:source unirule:MF_00166 . _:66084 up:source unirule:MF_00166 . _:66085 up:source unirule:MF_00166 . _:66086 up:source unirule:MF_00166 . _:66087 up:source unirule:MF_00166 . _:66088 up:source unirule:MF_00166 . _:66089 up:source unirule:MF_00166 . ?this up:annotation ?annotation2 , ?annotation3 , ?annotation4 ; up:classifiedWith GO:0003700 , GO:0006355 , keyword:10 , keyword:238 , keyword:804 , keyword:805 ; up:recommendedName ?name0 . ?name0 up:fullName 'DNA-binding protein Fis' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'fis' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters.' . ?annotation3 a up:Subunit_Annotation ; rdfs:comment 'Homodimer.' . ?annotation4 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the transcriptional regulatory Fis family.' . ?pfs5 up:annotation ?annotation6 . ?annotation6 faldo:begin ?pfsb7 ; faldo:end ?pfse8 ; rdf:type up:Nucleotide_Binding_Annotation ; rdfs:comment 'H-T-H motif' . ?pfsb7 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . ?pfse8 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . _:66090 a rdf:Statement ; up:attribution _:66078 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:66091 a rdf:Statement ; up:attribution _:66079 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:66092 a rdf:Statement ; up:attribution _:66080 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:66093 a rdf:Statement ; up:attribution _:66081 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:66094 a rdf:Statement ; up:attribution _:66082 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:66095 a rdf:Statement ; up:attribution _:66083 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:804 . _:66096 a rdf:Statement ; up:attribution _:66084 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:805 . _:66097 a rdf:Statement ; up:attribution _:66085 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:238 . _:66098 a rdf:Statement ; up:attribution _:66086 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:10 . _:66099 a rdf:Statement ; up:attribution _:66087 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003700 . _:66100 a rdf:Statement ; up:attribution _:66088 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006355 . _:66101 a rdf:Statement ; up:source unirule:MF_00166 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:66102 a rdf:Statement ; up:attribution _:66089 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00166 #Rule MF_00166 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2022-06-28 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00166 . ?thisOrganism rdfs:subClassOf+ taxon:1236 . BIND(URI(CONCAT(STR(?this), '#MF_00166a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00166a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00166a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00166a4')) AS ?annotation4) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch15 faldo:location ?templateMotifSequenceMatchRegionP0A6R316 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6R318 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6R3MF_0016611 . ?templateMotifSequenceMatchRegionP0A6R316 faldo:begin ?templateMotifSequenceMatchBeginP0A6R317 . ?templateMotifSequenceMatchBeginP0A6R317 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6R312 ; faldo:reference isoform:P0A6R3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6R318 edam:has_input signature:MF_00166 ; rdf:type edam:operation_0300 . ?targetMotifMatch19 faldo:location ?targetMotifMatchRegionMatch20 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0016622 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6R3MF_0016613 . ?targetMotifMatchRegionMatch20 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0016621 . ?targetMotifMatchRegionMatchBeginMF_0016621 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0016614 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0016622 edam:has_input signature:MF_00166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6R3MF_0016611, 1, (STRLEN(?templateMotifCigarP0A6R3MF_0016611) - STRLEN(REPLACE(?templateMotifCigarP0A6R3MF_0016611, CONCAT('^(?:-*[^-]){', STR(((74 - ?templateMotifSequenceMatchBeginPositionP0A6R312) + 1)), '}'), '')))), '[a-z]', '')) AS ?step123) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6R3MF_0016613, 1, (STRLEN(?targetMotifMatchCigarP0A6R3MF_0016613) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R3MF_0016613, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step123), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6R3MF_0016613, 1, (STRLEN(?targetMotifMatchCigarP0A6R3MF_0016613) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R3MF_0016613, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step123), '}'), '')))), '[^-]', ''))) AS ?step224) . BIND(((?step224 + ?targetMotifMatchRegionMatchBeginPositionMF_0016614) - 1) AS ?thisPositionOn9) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6R3MF_0016611, 1, (STRLEN(?templateMotifCigarP0A6R3MF_0016611) - STRLEN(REPLACE(?templateMotifCigarP0A6R3MF_0016611, CONCAT('^(?:-*[^-]){', STR(((93 - ?templateMotifSequenceMatchBeginPositionP0A6R312) + 1)), '}'), '')))), '[a-z]', '')) AS ?step125) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6R3MF_0016613, 1, (STRLEN(?targetMotifMatchCigarP0A6R3MF_0016613) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R3MF_0016613, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6R3MF_0016613, 1, (STRLEN(?targetMotifMatchCigarP0A6R3MF_0016613) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R3MF_0016613, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), '')))), '[^-]', ''))) AS ?step226) . BIND(((?step226 + ?targetMotifMatchRegionMatchBeginPositionMF_0016614) - 1) AS ?thisPositionOn10) . BIND(?this AS ?pfs1t27) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfsb7) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfse8) . FILTER ((BOUND(?thisPositionOn9) && BOUND(?thisPositionOn10))) . BIND(URI(CONCAT(STR(?this), '#MF_00166a6')) AS ?annotation6) . BIND(?this AS ?pfs5) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_00166 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00166#construct |