| http://purl.uniprot.org/unirules/MF_00196#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:80521 up:source unirule:MF_00196 .
_:80522 up:source unirule:MF_00196 .
_:80523 up:source unirule:MF_00196 .
_:80524 up:source unirule:MF_00196 .
_:80525 up:source unirule:MF_00196 .
_:80526 up:source unirule:MF_00196 .
_:80527 up:source unirule:MF_00196 .
_:80528 up:source unirule:MF_00196 .
_:80529 up:source unirule:MF_00196 .
_:80530 up:source unirule:MF_00196 .
?this up:annotation ?annotation2 ,
?annotation4 ;
up:classifiedWith GO:0008926 ,
keyword:520 ,
keyword:560 ;
up:recommendedName ?name0 .
?name0 up:ecName '1.1.1.17' ;
up:fullName 'Mannitol-1-phosphate 5-dehydrogenase' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'mtlD' .
?annotation2 up:activity ?activity3 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity3 up:catalyticActivity ;
up:enzymeClass .
?annotation4 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the mannitol dehydrogenase family.' .
?case5 up:classifiedWith keyword:7 .
?pfs6 up:annotation ?annotation7 .
?annotation7 faldo:begin ?pfsb8 ;
faldo:end ?pfse9 ;
rdf:type up:Modified_Residue_Annotation ;
rdfs:comment 'N6-acetyllysine' .
?pfsb8 faldo:position ?thisPositionOn10 ;
rdf:type faldo:ExactPosition .
?pfse9 faldo:position ?thisPositionOn11 ;
rdf:type faldo:ExactPosition .
?pfs12 up:annotation ?annotation13 .
?annotation13 faldo:begin ?pfsb14 ;
faldo:end ?pfse15 ;
up:ligand ?ligand16 ;
rdf:type up:Binding_Site_Annotation .
?pfsb14 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?pfse15 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?ligand16 rdfs:subClassOf chebi:57540 .
_:80531 a rdf:Statement ;
up:attribution _:80521 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:80532 a rdf:Statement ;
up:attribution _:80522 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:80533 a rdf:Statement ;
up:attribution _:80523 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:80534 a rdf:Statement ;
up:attribution _:80524 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:80535 a rdf:Statement ;
up:attribution _:80525 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:560 .
_:80536 a rdf:Statement ;
up:attribution _:80526 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:520 .
_:80537 a rdf:Statement ;
up:attribution _:80527 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008926 .
_:80538 a rdf:Statement ;
up:attribution _:80528 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:7 .
_:80539 a rdf:Statement ;
up:source unirule:MF_00196 ;
rdf:subject ?pfs6 ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:80540 a rdf:Statement ;
up:attribution _:80529 ;
rdf:subject ?pfs6 ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:80541 a rdf:Statement ;
up:source unirule:MF_00196 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:80542 a rdf:Statement ;
up:attribution _:80530 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00196
#Rule MF_00196 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-02
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00196 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00196a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00196a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_00196a4')) AS ?annotation4) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch24 faldo:location ?templateMotifSequenceMatchRegionP0942425 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0942427 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP09424MF_0019620 .
?templateMotifSequenceMatchRegionP0942425 faldo:begin ?templateMotifSequenceMatchBeginP0942426 .
?templateMotifSequenceMatchBeginP0942426 faldo:position ?templateMotifSequenceMatchBeginPositionP0942421 ;
faldo:reference isoform:P09424-1 .
?templateMotifSequenceProfileAlignmentOperationP0942427 edam:has_input signature:MF_00196 ;
rdf:type edam:operation_0300 .
?targetMotifMatch28 faldo:location ?targetMotifMatchRegionMatch29 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0019631 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP09424MF_0019622 .
?targetMotifMatchRegionMatch29 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0019630 .
?targetMotifMatchRegionMatchBeginMF_0019630 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0019623 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0019631 edam:has_input signature:MF_00196 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFT_2) .
VALUES ?supertaxon19 {taxon:561 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon19 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP09424MF_0019620, 1, (STRLEN(?templateMotifCigarP09424MF_0019620) - STRLEN(REPLACE(?templateMotifCigarP09424MF_0019620, CONCAT('^(?:-*[^-]){', STR(((269 - ?templateMotifSequenceMatchBeginPositionP0942421) + 1)), '}'), '')))), '[a-z]', '')) AS ?step132) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP09424MF_0019622, 1, (STRLEN(?targetMotifMatchCigarP09424MF_0019622) - STRLEN(REPLACE(?targetMotifMatchCigarP09424MF_0019622, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step132), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP09424MF_0019622, 1, (STRLEN(?targetMotifMatchCigarP09424MF_0019622) - STRLEN(REPLACE(?targetMotifMatchCigarP09424MF_0019622, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step132), '}'), '')))), '[^-]', ''))) AS ?step233) .
BIND(((?step233 + ?targetMotifMatchRegionMatchBeginPositionMF_0019623) - 1) AS ?thisPositionOn10) .
BIND(?thisPositionOn10 AS ?thisPositionOn11) .
BIND(?this AS ?pfs1t34) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb8) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse9) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn10, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_00196a7')) AS ?annotation7) .
BIND(?this AS ?pfs6) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch39 faldo:location ?templateMotifSequenceMatchRegionP0942440 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0942442 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP09424MF_0019635 .
?templateMotifSequenceMatchRegionP0942440 faldo:begin ?templateMotifSequenceMatchBeginP0942441 .
?templateMotifSequenceMatchBeginP0942441 faldo:position ?templateMotifSequenceMatchBeginPositionP0942436 ;
faldo:reference isoform:P09424-1 .
?templateMotifSequenceProfileAlignmentOperationP0942442 edam:has_input signature:MF_00196 ;
rdf:type edam:operation_0300 .
?targetMotifMatch43 faldo:location ?targetMotifMatchRegionMatch44 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0019646 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP09424MF_0019637 .
?targetMotifMatchRegionMatch44 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0019645 .
?targetMotifMatchRegionMatchBeginMF_0019645 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0019638 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0019646 edam:has_input signature:MF_00196 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP09424MF_0019635, 1, (STRLEN(?templateMotifCigarP09424MF_0019635) - STRLEN(REPLACE(?templateMotifCigarP09424MF_0019635, CONCAT('^(?:-*[^-]){', STR(((3 - ?templateMotifSequenceMatchBeginPositionP0942436) + 1)), '}'), '')))), '[a-z]', '')) AS ?step147) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP09424MF_0019637, 1, (STRLEN(?targetMotifMatchCigarP09424MF_0019637) - STRLEN(REPLACE(?targetMotifMatchCigarP09424MF_0019637, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP09424MF_0019637, 1, (STRLEN(?targetMotifMatchCigarP09424MF_0019637) - STRLEN(REPLACE(?targetMotifMatchCigarP09424MF_0019637, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), '')))), '[^-]', ''))) AS ?step248) .
BIND(((?step248 + ?targetMotifMatchRegionMatchBeginPositionMF_0019638) - 1) AS ?thisPositionOn17) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP09424MF_0019635, 1, (STRLEN(?templateMotifCigarP09424MF_0019635) - STRLEN(REPLACE(?templateMotifCigarP09424MF_0019635, CONCAT('^(?:-*[^-]){', STR(((14 - ?templateMotifSequenceMatchBeginPositionP0942436) + 1)), '}'), '')))), '[a-z]', '')) AS ?step149) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP09424MF_0019637, 1, (STRLEN(?targetMotifMatchCigarP09424MF_0019637) - STRLEN(REPLACE(?targetMotifMatchCigarP09424MF_0019637, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step149), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP09424MF_0019637, 1, (STRLEN(?targetMotifMatchCigarP09424MF_0019637) - STRLEN(REPLACE(?targetMotifMatchCigarP09424MF_0019637, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step149), '}'), '')))), '[^-]', ''))) AS ?step250) .
BIND(((?step250 + ?targetMotifMatchRegionMatchBeginPositionMF_0019638) - 1) AS ?thisPositionOn18) .
BIND(?this AS ?pfs2t51) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) .
FILTER (REGEX('[ARNDCQEGHILKMFPSTWYVBZJUOX]{3)FGAGNIGRG', SUBSTR(?thisSequenceValue, ?thisPositionOn17, (?thisPositionOn18 - ?thisPositionOn17)))) .
BIND(URI(CONCAT(STR(?this), '#MF_00196a13')) AS ?annotation13) .
BIND(?this AS ?pfs12) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag52) .
}
BIND(IF(BOUND(?tagFT_2), ?caseWithTag52, ?UNBOUND_VARIABLE) AS ?case5) .
}
"xsd:string |
