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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00237#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00237#construct-template-28 |
| http://purl.uniprot.org/unirules/MF_00237#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00237#construct-template-41 |
| http://purl.uniprot.org/unirules/MF_00237#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00237#construct-template-43 |
| http://purl.uniprot.org/unirules/MF_00237#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00237#construct-template-44 |
| http://purl.uniprot.org/unirules/MF_00237#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00237#construct-template-46 |
| http://purl.uniprot.org/unirules/MF_00237#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00237#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00237#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00237#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00237#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00237#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:100158 up:source unirule:MF_00237 .
_:100159 up:source unirule:MF_00237 .
_:100160 up:source unirule:MF_00237 .
_:100161 up:source unirule:MF_00237 .
_:100162 up:source unirule:MF_00237 .
_:100163 up:source unirule:MF_00237 .
_:100164 up:source unirule:MF_00237 .
_:100165 up:source unirule:MF_00237 .
_:100166 up:source unirule:MF_00237 .
_:100167 up:source unirule:MF_00237 .
_:100168 up:source unirule:MF_00237 .
_:100169 up:source unirule:MF_00237 .
_:100170 up:source unirule:MF_00237 .
_:100171 up:source unirule:MF_00237 .
?this up:annotation ?annotation0 ;
up:classifiedWith GO:0005886 ,
GO:0008320 ,
GO:0033281 ,
GO:0043953 ,
keyword:1003 ,
keyword:1133 ,
keyword:472 ,
keyword:653 ,
keyword:811 ,
keyword:812 ,
keyword:813 .
?annotation0 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the TatB family.' .
?case1 up:classifiedWith keyword:997 .
?pfs5 up:annotation ?annotation6 .
?annotation6 faldo:begin ?pfsb7 ;
faldo:end ?pfse8 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb7 faldo:position ?thisPositionOn9 ;
rdf:type faldo:ExactPosition .
?pfse8 faldo:position ?thisPositionOn10 ;
rdf:type faldo:ExactPosition .
_:100172 a rdf:Statement ;
up:attribution _:100158 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation0 .
_:100173 a rdf:Statement ;
up:attribution _:100159 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:100174 a rdf:Statement ;
up:attribution _:100160 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:100175 a rdf:Statement ;
up:attribution _:100161 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:653 .
_:100176 a rdf:Statement ;
up:attribution _:100162 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:813 .
_:100177 a rdf:Statement ;
up:attribution _:100163 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:811 .
_:100178 a rdf:Statement ;
up:attribution _:100164 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:100179 a rdf:Statement ;
up:attribution _:100165 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:100180 a rdf:Statement ;
up:attribution _:100166 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008320 .
_:100181 a rdf:Statement ;
up:attribution _:100167 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0043953 .
_:100182 a rdf:Statement ;
up:attribution _:100168 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005886 .
_:100183 a rdf:Statement ;
up:attribution _:100169 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0033281 .
_:100184 a rdf:Statement ;
up:attribution _:100170 ;
rdf:subject ?case1 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:100185 a rdf:Statement ;
up:source unirule:MF_00237 ;
rdf:subject ?pfs5 ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:100186 a rdf:Statement ;
up:attribution _:100171 ;
rdf:subject ?pfs5 ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00237
#Rule MF_00237 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00237 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00237a0')) AS ?annotation0) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch15 faldo:location ?templateMotifSequenceMatchRegionP6942516 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP6942518 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP69425MF_0023711 .
?templateMotifSequenceMatchRegionP6942516 faldo:begin ?templateMotifSequenceMatchBeginP6942517 .
?templateMotifSequenceMatchBeginP6942517 faldo:position ?templateMotifSequenceMatchBeginPositionP6942512 ;
faldo:reference isoform:P69425-1 .
?templateMotifSequenceProfileAlignmentOperationP6942518 edam:has_input signature:MF_00237 ;
rdf:type edam:operation_0300 .
?targetMotifMatch19 faldo:location ?targetMotifMatchRegionMatch20 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0023722 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP69425MF_0023713 .
?targetMotifMatchRegionMatch20 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0023721 .
?targetMotifMatchRegionMatchBeginMF_0023721 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0023714 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0023722 edam:has_input signature:MF_00237 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69425MF_0023711, 1, (STRLEN(?templateMotifCigarP69425MF_0023711) - STRLEN(REPLACE(?templateMotifCigarP69425MF_0023711, CONCAT('^(?:-*[^-]){', STR(((1 - ?templateMotifSequenceMatchBeginPositionP6942512) + 1)), '}'), '')))), '[a-z]', '')) AS ?step123) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69425MF_0023713, 1, (STRLEN(?targetMotifMatchCigarP69425MF_0023713) - STRLEN(REPLACE(?targetMotifMatchCigarP69425MF_0023713, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step123), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69425MF_0023713, 1, (STRLEN(?targetMotifMatchCigarP69425MF_0023713) - STRLEN(REPLACE(?targetMotifMatchCigarP69425MF_0023713, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step123), '}'), '')))), '[^-]', ''))) AS ?step224) .
BIND(((?step224 + ?targetMotifMatchRegionMatchBeginPositionMF_0023714) - 1) AS ?thisPositionOn9) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69425MF_0023711, 1, (STRLEN(?templateMotifCigarP69425MF_0023711) - STRLEN(REPLACE(?templateMotifCigarP69425MF_0023711, CONCAT('^(?:-*[^-]){', STR(((21 - ?templateMotifSequenceMatchBeginPositionP6942512) + 1)), '}'), '')))), '[a-z]', '')) AS ?step125) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69425MF_0023713, 1, (STRLEN(?targetMotifMatchCigarP69425MF_0023713) - STRLEN(REPLACE(?targetMotifMatchCigarP69425MF_0023713, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69425MF_0023713, 1, (STRLEN(?targetMotifMatchCigarP69425MF_0023713) - STRLEN(REPLACE(?targetMotifMatchCigarP69425MF_0023713, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), '')))), '[^-]', ''))) AS ?step226) .
BIND(((?step226 + ?targetMotifMatchRegionMatchBeginPositionMF_0023714) - 1) AS ?thisPositionOn10) .
BIND(?this AS ?pfs1t27) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfsb7) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfse8) .
FILTER ((BOUND(?thisPositionOn9) && BOUND(?thisPositionOn10))) .
BIND(URI(CONCAT(STR(?this), '#MF_00237a6')) AS ?annotation6) .
BIND(?this AS ?pfs5) .
}
OPTIONAL {
?this a up:Protein .
{
?this up:proteome |
| http://purl.uniprot.org/unirules/MF_00237 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00237#construct |