| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-41 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-65 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-42 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-66 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-37 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-36 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-51 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-50 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-64 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-49 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-39 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-54 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-60 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-56 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-57 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_00242#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00242#construct-template-53 |
| http://purl.uniprot.org/unirules/MF_00242#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00242#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00242#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00242#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00242#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00242#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:101738 up:source unirule:MF_00242 .
_:101739 up:source unirule:MF_00242 .
_:101740 up:source unirule:MF_00242 .
_:101741 up:source unirule:MF_00242 .
_:101742 up:source unirule:MF_00242 .
_:101743 up:source unirule:MF_00242 .
_:101744 up:source unirule:MF_00242 .
_:101745 up:source unirule:MF_00242 .
_:101746 up:source unirule:MF_00242 .
_:101747 up:source unirule:MF_00242 .
_:101748 up:source unirule:MF_00242 .
_:101749 up:source unirule:MF_00242 .
_:101750 up:source unirule:MF_00242 .
_:101751 up:source unirule:MF_00242 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation5 ,
?annotation6 ,
?annotation8 ;
up:classifiedWith GO:0005737 ,
GO:0006527 ,
GO:0016990 ,
keyword:378 ,
keyword:56 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '3.5.3.6' ;
up:fullName 'Arginine deiminase' ;
up:shortName 'ADI' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Arginine dihydrolase' ;
up:shortName 'AD' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'arcA' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 a up:Pathway_Annotation ;
rdfs:comment 'Amino-acid degradation; L-arginine degradation via ADI pathway; carbamoyl phosphate from L-arginine: step 1/2.' .
?annotation6 a up:Subcellular_Location_Annotation .
?annotation6li7 up:cellularComponent .
?annotation8 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the arginine deiminase family.' .
?pfs9 up:annotation ?annotation10 .
?annotation10 faldo:begin ?pfsb11 ;
faldo:end ?pfse12 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Amidino-cysteine intermediate' .
?pfsb11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?pfse12 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
_:101752 a rdf:Statement ;
up:attribution _:101738 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:101753 a rdf:Statement ;
up:attribution _:101739 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:101754 a rdf:Statement ;
up:attribution _:101740 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:101755 a rdf:Statement ;
up:attribution _:101741 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:101756 a rdf:Statement ;
up:attribution _:101742 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:101757 a rdf:Statement ;
up:attribution _:101743 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:101758 a rdf:Statement ;
up:attribution _:101744 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:101759 a rdf:Statement ;
up:attribution _:101745 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:101760 a rdf:Statement ;
up:attribution _:101746 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:378 .
_:101761 a rdf:Statement ;
up:attribution _:101747 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:56 .
_:101762 a rdf:Statement ;
up:attribution _:101748 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016990 .
_:101763 a rdf:Statement ;
up:attribution _:101749 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006527 .
_:101764 a rdf:Statement ;
up:attribution _:101750 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:101765 a rdf:Statement ;
up:source unirule:MF_00242 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:101766 a rdf:Statement ;
up:attribution _:101751 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00242
#Rule MF_00242 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2025-09-18
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00242 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00242a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00242a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00242a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00242a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_00242a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_00242a8')) AS ?annotation8) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch19 faldo:location ?templateMotifSequenceMatchRegionO5308820 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO5308822 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarO53088MF_0024215 .
?templateMotifSequenceMatchRegionO5308820 faldo:begin ?templateMotifSequenceMatchBeginO5308821 .
?templateMotifSequenceMatchBeginO5308821 faldo:position ?templateMotifSequenceMatchBeginPositionO5308816 ;
faldo:reference isoform:O53088-1 .
?templateMotifSequenceProfileAlignmentOperationO5308822 edam:has_input signature:MF_00242 ;
rdf:type edam:operation_0300 .
?targetMotifMatch23 faldo:location ?targetMotifMatchRegionMatch24 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0024226 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarO53088MF_0024217 .
?targetMotifMatchRegionMatch24 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0024225 .
?targetMotifMatchRegionMatchBeginMF_0024225 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0024218 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0024226 edam:has_input signature:MF_00242 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO53088MF_0024215, 1, (STRLEN(?templateMotifCigarO53088MF_0024215) - STRLEN(REPLACE(?templateMotifCigarO53088MF_0024215, CONCAT('^(?:-*[^-]){', STR(((399 - ?templateMotifSequenceMatchBeginPositionO5308816) + 1)), '}'), '')))), '[a-z]', '')) AS ?step127) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO53088MF_0024217, 1, (STRLEN(?targetMotifMatchCigarO53088MF_0024217) - STRLEN(REPLACE(?targetMotifMatchCigarO53088MF_0024217, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO53088MF_0024217, 1, (STRLEN(?targetMotifMatchCigarO53088MF_0024217) - STRLEN(REPLACE(?targetMotifMatchCigarO53088MF_0024217, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), '')))), '[^-]', ''))) AS ?step228) .
BIND(((?step228 + ?targetMotifMatchRegionMatchBeginPositionMF_0024218) - 1) AS ?thisPositionOn13) .
BIND(?thisPositionOn13 AS ?thisPositionOn14) .
BIND(?this AS ?pfs1t29) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb11) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse12) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn13, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_00242a10')) AS ?annotation10) .
BIND(?this AS ?pfs9) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_00242 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00242#construct |
