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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-17 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-56 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-6 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-32 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-58 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-54 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-3 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-62 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-47 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-8 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-60 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-46 |
| http://purl.uniprot.org/unirules/MF_00348#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00348#construct-template-48 |
| http://purl.uniprot.org/unirules/MF_00348#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00348#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00348#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00348#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00348#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00348#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:139474 up:source unirule:MF_00348 . _:139475 up:source unirule:MF_00348 . _:139476 up:source unirule:MF_00348 . _:139477 up:source unirule:MF_00348 . _:139478 up:source unirule:MF_00348 . _:139479 up:source unirule:MF_00348 . _:139480 up:source unirule:MF_00348 . _:139481 up:source unirule:MF_00348 . _:139482 up:source unirule:MF_00348 . _:139483 up:source unirule:MF_00348 . _:139484 up:source unirule:MF_00348 . _:139485 up:source unirule:MF_00348 . _:139486 up:source unirule:MF_00348 . _:139487 up:source unirule:MF_00348 . _:139488 up:source unirule:MF_00348 . _:139489 up:source unirule:MF_00348 . ?this up:annotation ?annotation2 , ?annotation3 ; up:classifiedWith GO:0003684 , GO:0005524 , GO:0006281 , GO:0006310 , GO:0006974 , GO:0008094 , keyword:227 , keyword:233 , keyword:238 , keyword:547 , keyword:67 ; up:recommendedName ?name0 . ?name0 up:fullName 'DNA repair and recombination protein RadA' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'radA' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the eukaryotic RecA-like protein family.' . ?pfs4 up:annotation ?annotation5 . ?annotation5 faldo:begin ?pfsb6 ; faldo:end ?pfse7 ; up:ligand ?ligand8 ; rdf:type up:Binding_Site_Annotation . ?pfsb6 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . ?pfse7 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?ligand8 rdfs:subClassOf chebi:30616 . _:139490 a rdf:Statement ; up:attribution _:139474 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:139491 a rdf:Statement ; up:attribution _:139475 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:139492 a rdf:Statement ; up:attribution _:139476 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:139493 a rdf:Statement ; up:attribution _:139477 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:139494 a rdf:Statement ; up:attribution _:139478 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:227 . _:139495 a rdf:Statement ; up:attribution _:139479 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:233 . _:139496 a rdf:Statement ; up:attribution _:139480 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:139497 a rdf:Statement ; up:attribution _:139481 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:139498 a rdf:Statement ; up:attribution _:139482 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:238 . _:139499 a rdf:Statement ; up:attribution _:139483 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:139500 a rdf:Statement ; up:attribution _:139484 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003684 . _:139501 a rdf:Statement ; up:attribution _:139485 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008094 . _:139502 a rdf:Statement ; up:attribution _:139486 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006310 . _:139503 a rdf:Statement ; up:attribution _:139487 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006281 . _:139504 a rdf:Statement ; up:attribution _:139488 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006974 . _:139505 a rdf:Statement ; up:source unirule:MF_00348 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:139506 a rdf:Statement ; up:attribution _:139489 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00348 #Rule MF_00348 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00348 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(URI(CONCAT(STR(?this), '#MF_00348a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00348a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00348a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch15 faldo:location ?templateMotifSequenceMatchRegionQ4959316 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ4959318 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ49593MF_0034811 . ?templateMotifSequenceMatchRegionQ4959316 faldo:begin ?templateMotifSequenceMatchBeginQ4959317 . ?templateMotifSequenceMatchBeginQ4959317 faldo:position ?templateMotifSequenceMatchBeginPositionQ4959312 ; faldo:reference isoform:Q49593-1 . ?templateMotifSequenceProfileAlignmentOperationQ4959318 edam:has_input signature:MF_00348 ; rdf:type edam:operation_0300 . ?targetMotifMatch19 faldo:location ?targetMotifMatchRegionMatch20 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0034822 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ49593MF_0034813 . ?targetMotifMatchRegionMatch20 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0034821 . ?targetMotifMatchRegionMatchBeginMF_0034821 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0034814 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0034822 edam:has_input signature:MF_00348 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ49593MF_0034811, 1, (STRLEN(?templateMotifCigarQ49593MF_0034811) - STRLEN(REPLACE(?templateMotifCigarQ49593MF_0034811, CONCAT('^(?:-*[^-]){', STR(((136 - ?templateMotifSequenceMatchBeginPositionQ4959312) + 1)), '}'), '')))), '[a-z]', '')) AS ?step123) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ49593MF_0034813, 1, (STRLEN(?targetMotifMatchCigarQ49593MF_0034813) - STRLEN(REPLACE(?targetMotifMatchCigarQ49593MF_0034813, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step123), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ49593MF_0034813, 1, (STRLEN(?targetMotifMatchCigarQ49593MF_0034813) - STRLEN(REPLACE(?targetMotifMatchCigarQ49593MF_0034813, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step123), '}'), '')))), '[^-]', ''))) AS ?step224) . BIND(((?step224 + ?targetMotifMatchRegionMatchBeginPositionMF_0034814) - 1) AS ?thisPositionOn9) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ49593MF_0034811, 1, (STRLEN(?templateMotifCigarQ49593MF_0034811) - STRLEN(REPLACE(?templateMotifCigarQ49593MF_0034811, CONCAT('^(?:-*[^-]){', STR(((143 - ?templateMotifSequenceMatchBeginPositionQ4959312) + 1)), '}'), '')))), '[a-z]', '')) AS ?step125) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ49593MF_0034813, 1, (STRLEN(?targetMotifMatchCigarQ49593MF_0034813) - STRLEN(REPLACE(?targetMotifMatchCigarQ49593MF_0034813, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ49593MF_0034813, 1, (STRLEN(?targetMotifMatchCigarQ49593MF_0034813) - STRLEN(REPLACE(?targetMotifMatchCigarQ49593MF_0034813, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), '')))), '[^-]', ''))) AS ?step226) . BIND(((?step226 + ?targetMotifMatchRegionMatchBeginPositionMF_0034814) - 1) AS ?thisPositionOn10) . BIND(?this AS ?pfs1t27) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfsb6) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfse7) . FILTER (REGEX('G[ARNDCQEGHILKMFPSTWYVBZJUOX][ARNDCQEGHILKMFPSTWYVBZJUOX]G[AS]GK[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn9, (?thisPositionOn10 - ?thisPositionOn9)))) . BIND(URI(CONCAT(STR(?this), '#MF_00348a5')) AS ?annotation5) . BIND(?this AS ?pfs4) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_00348 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00348#construct |