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http://purl.uniprot.org/unirules/MF_00362#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00362#construct-template-1
http://purl.uniprot.org/unirules/MF_00362#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00362#construct-template-3
http://purl.uniprot.org/unirules/MF_00362#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00362#construct-template-44
http://purl.uniprot.org/unirules/MF_00362#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00362#construct-template-16
http://purl.uniprot.org/unirules/MF_00362#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00362#construct-template-54
http://purl.uniprot.org/unirules/MF_00362#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00362#construct-template-31
http://purl.uniprot.org/unirules/MF_00362#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00362#construct-template-59
http://purl.uniprot.org/unirules/MF_00362#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00362#construct-template-18
http://purl.uniprot.org/unirules/MF_00362#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00362#construct-template-57
http://purl.uniprot.org/unirules/MF_00362#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00362#construct-template-50
http://purl.uniprot.org/unirules/MF_00362#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00362#construct-template-53
http://purl.uniprot.org/unirules/MF_00362#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00362#construct-template-55
http://purl.uniprot.org/unirules/MF_00362#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_00362#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_00362#construct-where-list-0
http://purl.uniprot.org/unirules/MF_00362#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00362#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00362#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:144579 up:source unirule:MF_00362 . _:144580 up:source unirule:MF_00362 . _:144581 up:source unirule:MF_00362 . _:144582 up:source unirule:MF_00362 . _:144583 up:source unirule:MF_00362 . _:144584 up:source unirule:MF_00362 . _:144585 up:source unirule:MF_00362 . _:144586 up:source unirule:MF_00362 . _:144587 up:source unirule:MF_00362 . _:144588 up:source unirule:MF_00362 . _:144589 up:source unirule:MF_00362 . _:144590 up:source unirule:MF_00362 . ?this up:annotation ?annotation0 , ?annotation1 , ?annotation2 ; up:classifiedWith GO:0006412 , GO:0070180 , keyword:687 , keyword:689 , keyword:694 , keyword:699 . ?annotation0 a up:Function_Annotation ; rdfs:comment 'Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.' . ?annotation1 a up:Subunit_Annotation ; rdfs:comment 'Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.' . ?annotation2 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the universal ribosomal protein uL10 family.' . ?case4 up:classifiedWith keyword:7 . ?pfs6 up:annotation ?annotation7 . ?annotation7 faldo:begin ?pfsb8 ; faldo:end ?pfse9 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment 'N6-acetyllysine' . ?pfsb8 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfse9 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment 'N6-acetyllysine' . ?pfsb14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . _:144591 a rdf:Statement ; up:attribution _:144579 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:144592 a rdf:Statement ; up:attribution _:144580 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:144593 a rdf:Statement ; up:attribution _:144581 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:144594 a rdf:Statement ; up:attribution _:144582 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:687 . _:144595 a rdf:Statement ; up:attribution _:144583 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:689 . _:144596 a rdf:Statement ; up:attribution _:144584 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:694 . _:144597 a rdf:Statement ; up:attribution _:144585 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:699 . _:144598 a rdf:Statement ; up:attribution _:144586 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0070180 . _:144599 a rdf:Statement ; up:attribution _:144587 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006412 . _:144600 a rdf:Statement ; up:attribution _:144588 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:7 . _:144601 a rdf:Statement ; up:source unirule:MF_00362 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:144602 a rdf:Statement ; up:attribution _:144589 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:144603 a rdf:Statement ; up:source unirule:MF_00362 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:144604 a rdf:Statement ; up:attribution _:144590 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00362 #Rule MF_00362 Created by:? on:2005-02-28 Modified by:Andrea Auchincloss on:2023-09-21 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00362 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_00362a0')) AS ?annotation0) . BIND(URI(CONCAT(STR(?this), '#MF_00362a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_00362a2')) AS ?annotation2) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch23 faldo:location ?templateMotifSequenceMatchRegionP0A7J324 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A7J326 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A7J3MF_0036219 . ?templateMotifSequenceMatchRegionP0A7J324 faldo:begin ?templateMotifSequenceMatchBeginP0A7J325 . ?templateMotifSequenceMatchBeginP0A7J325 faldo:position ?templateMotifSequenceMatchBeginPositionP0A7J320 ; faldo:reference isoform:P0A7J3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A7J326 edam:has_input signature:MF_00362 ; rdf:type edam:operation_0300 . ?targetMotifMatch27 faldo:location ?targetMotifMatchRegionMatch28 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0036230 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A7J3MF_0036221 . ?targetMotifMatchRegionMatch28 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0036229 . ?targetMotifMatchRegionMatchBeginMF_0036229 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0036222 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0036230 edam:has_input signature:MF_00362 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFT_1) . VALUES ?supertaxon18 {taxon:620 taxon:561} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon18 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A7J3MF_0036219, 1, (STRLEN(?templateMotifCigarP0A7J3MF_0036219) - STRLEN(REPLACE(?templateMotifCigarP0A7J3MF_0036219, CONCAT('^(?:-*[^-]){', STR(((37 - ?templateMotifSequenceMatchBeginPositionP0A7J320) + 1)), '}'), '')))), '[a-z]', '')) AS ?step131) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A7J3MF_0036221, 1, (STRLEN(?targetMotifMatchCigarP0A7J3MF_0036221) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7J3MF_0036221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step131), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A7J3MF_0036221, 1, (STRLEN(?targetMotifMatchCigarP0A7J3MF_0036221) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7J3MF_0036221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step131), '}'), '')))), '[^-]', ''))) AS ?step232) . BIND(((?step232 + ?targetMotifMatchRegionMatchBeginPositionMF_0036222) - 1) AS ?thisPositionOn10) . BIND(?thisPositionOn10 AS ?thisPositionOn11) . BIND(?this AS ?pfs1t33) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb8) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse9) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn10, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00362a7')) AS ?annotation7) . BIND(?this AS ?pfs6) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch39 faldo:location ?templateMotifSequenceMatchRegionP0A7J340 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A7J342 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A7J3MF_0036235 . ?templateMotifSequenceMatchRegionP0A7J340 faldo:begin ?templateMotifSequenceMatchBeginP0A7J341 . ?templateMotifSequenceMatchBeginP0A7J341 faldo:position ?templateMotifSequenceMatchBeginPositionP0A7J336 ; faldo:reference isoform:P0A7J3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A7J342 edam:has_input signature:MF_00362 ; rdf:type edam:operation_0300 . ?targetMotifMatch43 faldo:location ?targetMotifMatchRegionMatch44 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0036246 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A7J3MF_0036237 . ?targetMotifMatchRegionMatch44 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0036245 . ?targetMotifMatchRegionMatchBeginMF_0036245 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0036238 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0036246 edam:has_input signature:MF_00362 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFT_2) . VALUES ?supertaxon34 {taxon:561 taxon:620} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon34 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A7J3MF_0036235, 1, (STRLEN(?templateMotifCigarP0A7J3MF_0036235) - STRLEN(REPLACE(?templateMotifCigarP0A7J3MF_0036235, CONCAT('^(?:-*[^-]){', STR(((105 - ?templateMotifSequenceMatchBeginPositionP0A7J336) + 1)), '}'), '')))), '[a-z]', '')) AS ?step147) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A7J3MF_0036237, 1, (STRLEN(?targetMotifMatchCigarP0A7J3MF_0036237) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7J3MF_0036237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A7J3MF_0036237, 1, (STRLEN(?targetMotifMatchCigarP0A7J3MF_0036237) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7J3MF_0036237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), '')))), '[^-]', ''))) AS ?step248) . BIND(((?step248 + ?targetMotifMatchRegionMatchBeginPositionMF_0036238) - 1) AS ?thisPositionOn16) . BIND(?thisPositionOn16 AS ?thisPositionOn17) . BIND(?this AS ?pfs2t49) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse15) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00362a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1117 . BIND(?this AS ?case3) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag50) . } BIND(IF((BOUND(?tagFT_1) || BOUND(?tagFT_2)), ?caseWithTag50, ?UNBOUND_VARIABLE) AS ?case4) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1117 . })) . BIND(?this AS ?case5) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_00362http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00362#construct
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