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http://purl.uniprot.org/unirules/MF_00403#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_00403#construct-where-list-0
http://purl.uniprot.org/unirules/MF_00403#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00403#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00403#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:158414 up:source unirule:MF_00403 . _:158415 up:source unirule:MF_00403 . _:158416 up:source unirule:MF_00403 . _:158417 up:source unirule:MF_00403 . _:158418 up:source unirule:MF_00403 . _:158419 up:source unirule:MF_00403 . _:158420 up:source unirule:MF_00403 . _:158421 up:source unirule:MF_00403 . _:158422 up:source unirule:MF_00403 . _:158423 up:source unirule:MF_00403 . _:158424 up:source unirule:MF_00403 . _:158425 up:source unirule:MF_00403 . ?this up:annotation ?annotation0 ; up:classifiedWith GO:0006412 , GO:0019843 , keyword:687 , keyword:689 , keyword:694 , keyword:699 . ?annotation0 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the universal ribosomal protein uS12 family.' . ?case1 up:classifiedWith keyword:7 . ?case2 up:classifiedWith GO:0009507 . ?case4 up:classifiedWith GO:0000049 , keyword:820 . ?pfs7 up:annotation ?annotation8 . ?annotation8 faldo:begin ?pfsb9 ; faldo:end ?pfse10 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment 'N6-acetyllysine' . ?pfsb9 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?pfse10 faldo:position ?thisPositionOn12 ; rdf:type faldo:ExactPosition . _:158426 a rdf:Statement ; up:attribution _:158414 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:158427 a rdf:Statement ; up:attribution _:158415 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:687 . _:158428 a rdf:Statement ; up:attribution _:158416 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:689 . _:158429 a rdf:Statement ; up:attribution _:158417 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:694 . _:158430 a rdf:Statement ; up:attribution _:158418 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:699 . _:158431 a rdf:Statement ; up:attribution _:158419 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0019843 . _:158432 a rdf:Statement ; up:attribution _:158420 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006412 . _:158433 a rdf:Statement ; up:attribution _:158421 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:7 . _:158434 a rdf:Statement ; up:attribution _:158422 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object GO:0009507 . _:158435 a rdf:Statement ; up:attribution _:158423 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:820 . _:158436 a rdf:Statement ; up:attribution _:158424 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object GO:0000049 . _:158437 a rdf:Statement ; up:source unirule:MF_00403 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:158438 a rdf:Statement ; up:attribution _:158425 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation8 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00403 #Rule MF_00403 Created by:? on:2005-02-28 Modified by:Andrea Auchincloss on:2023-09-21 { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00403_B . ?thisOrganism rdfs:subClassOf+ taxon:2 . } UNION { ?this rdfs:seeAlso signature:MF_00403_B . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } } UNION { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00403_A . ?thisOrganism rdfs:subClassOf+ taxon:2157 . } BIND(URI(CONCAT(STR(?this), '#MF_00403a0')) AS ?annotation0) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch18 faldo:location ?templateMotifSequenceMatchRegionP0A7S319 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A7S321 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A7S3MF_00403_B14 . ?templateMotifSequenceMatchRegionP0A7S319 faldo:begin ?templateMotifSequenceMatchBeginP0A7S320 . ?templateMotifSequenceMatchBeginP0A7S320 faldo:position ?templateMotifSequenceMatchBeginPositionP0A7S315 ; faldo:reference isoform:P0A7S3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A7S321 edam:has_input signature:MF_00403_B ; rdf:type edam:operation_0300 . ?targetMotifMatch22 faldo:location ?targetMotifMatchRegionMatch23 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00403_B25 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A7S3MF_00403_B16 . ?targetMotifMatchRegionMatch23 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00403_B24 . ?targetMotifMatchRegionMatchBeginMF_00403_B24 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00403_B17 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00403_B25 edam:has_input signature:MF_00403_B ; rdf:type edam:operation_0300 . BIND(?this AS ?tagacet) . VALUES ?supertaxon13 {taxon:561 taxon:620} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon13 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A7S3MF_00403_B14, 1, (STRLEN(?templateMotifCigarP0A7S3MF_00403_B14) - STRLEN(REPLACE(?templateMotifCigarP0A7S3MF_00403_B14, CONCAT('^(?:-*[^-]){', STR(((108 - ?templateMotifSequenceMatchBeginPositionP0A7S315) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A7S3MF_00403_B16, 1, (STRLEN(?targetMotifMatchCigarP0A7S3MF_00403_B16) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7S3MF_00403_B16, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A7S3MF_00403_B16, 1, (STRLEN(?targetMotifMatchCigarP0A7S3MF_00403_B16) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7S3MF_00403_B16, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) . BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_00403_B17) - 1) AS ?thisPositionOn11) . BIND(?thisPositionOn11 AS ?thisPositionOn12) . BIND(?this AS ?pfs1t28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfsb9) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfse10) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn11, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00403a8')) AS ?annotation8) . BIND(?this AS ?pfs7) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag29) . } BIND(IF(BOUND(?tagacet), ?caseWithTag29, ?UNBOUND_VARIABLE) AS ?case1) . OPTIONAL { ?this a up:Protein . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } BIND(?this AS ?case2) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(?this AS ?case3) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(?this AS ?case4) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1117 . BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1117 . })) . BIND(?this AS ?case6) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_00403http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00403#construct
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