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SubjectPredicateObject
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-23
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-47
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-22
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-46
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-21
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-45
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-44
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-20
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-43
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-42
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-41
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-40
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-61
http://purl.uniprot.org/unirules/MF_00440#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00440#construct-template-60
http://purl.uniprot.org/unirules/MF_00440#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_00440#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_00440#construct-where-list-0
http://purl.uniprot.org/unirules/MF_00440#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00440#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00440#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:174282 up:source unirule:MF_00440 . _:174283 up:source unirule:MF_00440 . _:174284 up:source unirule:MF_00440 . _:174285 up:source unirule:MF_00440 . _:174286 up:source unirule:MF_00440 . _:174287 up:source unirule:MF_00440 . _:174288 up:source unirule:MF_00440 . _:174289 up:source unirule:MF_00440 . _:174290 up:source unirule:MF_00440 . _:174291 up:source unirule:MF_00440 . _:174292 up:source unirule:MF_00440 . _:174293 up:source unirule:MF_00440 . _:174294 up:source unirule:MF_00440 . _:174295 up:source unirule:MF_00440 . _:174296 up:source unirule:MF_00440 . _:174297 up:source unirule:MF_00440 . ?this up:annotation ?annotation2 , ?annotation3 ; up:classifiedWith GO:0045892 , keyword:238 , keyword:547 , keyword:678 , keyword:67 , keyword:804 , keyword:805 ; up:recommendedName ?name0 . ?name0 up:fullName 'Transcriptional repressor NrdR' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'nrdR' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes.' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the NrdR family.' . ?case4 up:classifiedWith GO:0008270 , keyword:479 , keyword:862 , keyword:863 . ?pfs5 up:annotation ?annotation6 . ?annotation6 faldo:begin ?pfsb7 ; faldo:end ?pfse8 ; rdf:type up:Zinc_Finger_Annotation . ?pfsb7 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . ?pfse8 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . _:174298 a rdf:Statement ; up:attribution _:174282 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:174299 a rdf:Statement ; up:attribution _:174283 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:174300 a rdf:Statement ; up:attribution _:174284 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:174301 a rdf:Statement ; up:attribution _:174285 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:174302 a rdf:Statement ; up:attribution _:174286 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:174303 a rdf:Statement ; up:attribution _:174287 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:238 . _:174304 a rdf:Statement ; up:attribution _:174288 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:174305 a rdf:Statement ; up:attribution _:174289 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:678 . _:174306 a rdf:Statement ; up:attribution _:174290 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:804 . _:174307 a rdf:Statement ; up:attribution _:174291 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:805 . _:174308 a rdf:Statement ; up:attribution _:174292 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0045892 . _:174309 a rdf:Statement ; up:attribution _:174293 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:174310 a rdf:Statement ; up:attribution _:174294 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:174311 a rdf:Statement ; up:attribution _:174295 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:863 . _:174312 a rdf:Statement ; up:attribution _:174296 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object GO:0008270 . _:174313 a rdf:Statement ; up:source unirule:MF_00440 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:174314 a rdf:Statement ; up:attribution _:174297 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00440 #Rule MF_00440 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01 VALUES ?supertaxon11 {taxon:2 taxon:2157} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00440 . ?thisOrganism rdfs:subClassOf+ ?supertaxon11 . BIND(URI(CONCAT(STR(?this), '#MF_00440a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00440a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00440a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch16 faldo:location ?templateMotifSequenceMatchRegionO6998017 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO6998019 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarO69980MF_0044012 . ?templateMotifSequenceMatchRegionO6998017 faldo:begin ?templateMotifSequenceMatchBeginO6998018 . ?templateMotifSequenceMatchBeginO6998018 faldo:position ?templateMotifSequenceMatchBeginPositionO6998013 ; faldo:reference isoform:O69980-1 . ?templateMotifSequenceProfileAlignmentOperationO6998019 edam:has_input signature:MF_00440 ; rdf:type edam:operation_0300 . ?targetMotifMatch20 faldo:location ?targetMotifMatchRegionMatch21 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0044023 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarO69980MF_0044014 . ?targetMotifMatchRegionMatch21 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0044022 . ?targetMotifMatchRegionMatchBeginMF_0044022 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0044015 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0044023 edam:has_input signature:MF_00440 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO69980MF_0044012, 1, (STRLEN(?templateMotifCigarO69980MF_0044012) - STRLEN(REPLACE(?templateMotifCigarO69980MF_0044012, CONCAT('^(?:-*[^-]){', STR(((3 - ?templateMotifSequenceMatchBeginPositionO6998013) + 1)), '}'), '')))), '[a-z]', '')) AS ?step124) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO69980MF_0044014, 1, (STRLEN(?targetMotifMatchCigarO69980MF_0044014) - STRLEN(REPLACE(?targetMotifMatchCigarO69980MF_0044014, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step124), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO69980MF_0044014, 1, (STRLEN(?targetMotifMatchCigarO69980MF_0044014) - STRLEN(REPLACE(?targetMotifMatchCigarO69980MF_0044014, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step124), '}'), '')))), '[^-]', ''))) AS ?step225) . BIND(((?step225 + ?targetMotifMatchRegionMatchBeginPositionMF_0044015) - 1) AS ?thisPositionOn9) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO69980MF_0044012, 1, (STRLEN(?templateMotifCigarO69980MF_0044012) - STRLEN(REPLACE(?templateMotifCigarO69980MF_0044012, CONCAT('^(?:-*[^-]){', STR(((34 - ?templateMotifSequenceMatchBeginPositionO6998013) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO69980MF_0044014, 1, (STRLEN(?targetMotifMatchCigarO69980MF_0044014) - STRLEN(REPLACE(?targetMotifMatchCigarO69980MF_0044014, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO69980MF_0044014, 1, (STRLEN(?targetMotifMatchCigarO69980MF_0044014) - STRLEN(REPLACE(?targetMotifMatchCigarO69980MF_0044014, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) . BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0044015) - 1) AS ?thisPositionOn10) . BIND(?this AS ?pfs1t28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfsb7) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfse8) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]{2)C[ARNDCQEGHILKMFPSTWYVBZJUOX]{22,24)C[ARNDCQEGHILKMFPSTWYVBZJUOX]{1,2)C', SUBSTR(?thisSequenceValue, ?thisPositionOn9, (?thisPositionOn10 - ?thisPositionOn9)))) . BIND(?this AS ?pfs5) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag29) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag29, ?UNBOUND_VARIABLE) AS ?case4) . } "xsd:string
http://purl.uniprot.org/unirules/MF_00440http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00440#construct
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