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http://purl.uniprot.org/unirules/MF_00503#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00503#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00503#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:200067 up:source unirule:MF_00503 . _:200068 up:source unirule:MF_00503 . _:200069 up:source unirule:MF_00503 . _:200070 up:source unirule:MF_00503 . _:200071 up:source unirule:MF_00503 . _:200072 up:source unirule:MF_00503 . _:200073 up:source unirule:MF_00503 . _:200074 up:source unirule:MF_00503 . _:200075 up:source unirule:MF_00503 . _:200076 up:source unirule:MF_00503 . _:200077 up:source unirule:MF_00503 . ?this up:annotation ?annotation0 , ?annotation1 ; up:classifiedWith GO:0006412 , GO:0019843 , keyword:687 , keyword:689 , keyword:694 , keyword:699 . ?annotation0 a up:Function_Annotation ; rdfs:comment 'Binds to the 23S rRNA.' . ?annotation1 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the bacterial ribosomal protein bL9 family.' . ?case2 up:classifiedWith keyword:7 . ?case3 up:classifiedWith GO:0009507 . ?pfs7 up:annotation ?annotation8 . ?annotation8 faldo:begin ?pfsb9 ; faldo:end ?pfse10 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment 'N6-acetyllysine' . ?pfsb9 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?pfse10 faldo:position ?thisPositionOn12 ; rdf:type faldo:ExactPosition . _:200078 a rdf:Statement ; up:attribution _:200067 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:200079 a rdf:Statement ; up:attribution _:200068 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:200080 a rdf:Statement ; up:attribution _:200069 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:687 . _:200081 a rdf:Statement ; up:attribution _:200070 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:689 . _:200082 a rdf:Statement ; up:attribution _:200071 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:694 . _:200083 a rdf:Statement ; up:attribution _:200072 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:699 . _:200084 a rdf:Statement ; up:attribution _:200073 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0019843 . _:200085 a rdf:Statement ; up:attribution _:200074 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006412 . _:200086 a rdf:Statement ; up:attribution _:200075 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object keyword:7 . _:200087 a rdf:Statement ; up:attribution _:200076 ; rdf:subject ?case3 ; rdf:predicate up:classifiedWith ; rdf:object GO:0009507 . _:200088 a rdf:Statement ; up:source unirule:MF_00503 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:200089 a rdf:Statement ; up:attribution _:200077 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation8 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00503 #Rule MF_00503 Created by:? on:2005-02-28 Modified by:Andrea Auchincloss on:2023-09-22 { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00503 . ?thisOrganism rdfs:subClassOf+ taxon:2 . } UNION { ?this rdfs:seeAlso signature:MF_00503 . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } } BIND(URI(CONCAT(STR(?this), '#MF_00503a0')) AS ?annotation0) . BIND(URI(CONCAT(STR(?this), '#MF_00503a1')) AS ?annotation1) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch18 faldo:location ?templateMotifSequenceMatchRegionP0A7R119 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A7R121 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A7R1MF_0050314 . ?templateMotifSequenceMatchRegionP0A7R119 faldo:begin ?templateMotifSequenceMatchBeginP0A7R120 . ?templateMotifSequenceMatchBeginP0A7R120 faldo:position ?templateMotifSequenceMatchBeginPositionP0A7R115 ; faldo:reference isoform:P0A7R1-1 . ?templateMotifSequenceProfileAlignmentOperationP0A7R121 edam:has_input signature:MF_00503 ; rdf:type edam:operation_0300 . ?targetMotifMatch22 faldo:location ?targetMotifMatchRegionMatch23 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0050325 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A7R1MF_0050316 . ?targetMotifMatchRegionMatch23 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0050324 . ?targetMotifMatchRegionMatchBeginMF_0050324 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0050317 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0050325 edam:has_input signature:MF_00503 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFT_1) . VALUES ?supertaxon13 {taxon:620 taxon:561} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon13 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A7R1MF_0050314, 1, (STRLEN(?templateMotifCigarP0A7R1MF_0050314) - STRLEN(REPLACE(?templateMotifCigarP0A7R1MF_0050314, CONCAT('^(?:-*[^-]){', STR(((89 - ?templateMotifSequenceMatchBeginPositionP0A7R115) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A7R1MF_0050316, 1, (STRLEN(?targetMotifMatchCigarP0A7R1MF_0050316) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7R1MF_0050316, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A7R1MF_0050316, 1, (STRLEN(?targetMotifMatchCigarP0A7R1MF_0050316) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7R1MF_0050316, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) . BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0050317) - 1) AS ?thisPositionOn11) . BIND(?thisPositionOn11 AS ?thisPositionOn12) . BIND(?this AS ?pfs1t28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfsb9) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfse10) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn11, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00503a8')) AS ?annotation8) . BIND(?this AS ?pfs7) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag29) . } BIND(IF(BOUND(?tagFT_1), ?caseWithTag29, ?UNBOUND_VARIABLE) AS ?case2) . OPTIONAL { ?this a up:Protein . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } BIND(?this AS ?case3) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1117 . BIND(?this AS ?case4) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:2 . })) . BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1117 . })) . BIND(?this AS ?case6) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_00503http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00503#construct
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