| http://purl.uniprot.org/unirules/MF_00597#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:232280 up:source unirule:MF_00597 .
_:232281 up:source unirule:MF_00597 .
_:232282 up:source unirule:MF_00597 .
_:232283 up:source unirule:MF_00597 .
_:232284 up:source unirule:MF_00597 .
_:232285 up:source unirule:MF_00597 .
_:232286 up:source unirule:MF_00597 .
_:232287 up:source unirule:MF_00597 .
_:232288 up:source unirule:MF_00597 .
_:232289 up:source unirule:MF_00597 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ;
up:classifiedWith GO:0047602 ,
keyword:210 ,
keyword:456 ,
keyword:704 ;
up:recommendedName ?name0 .
?name0 up:ecName '4.1.1.4' ;
up:fullName 'Acetoacetate decarboxylase' ;
up:shortName 'AAD' ,
'ADC' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'adc' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the conversion of acetoacetate to acetone and carbon dioxide.' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the ADC family.' .
?pfs6 up:annotation ?annotation7 .
?annotation7 faldo:begin ?pfsb8 ;
faldo:end ?pfse9 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Schiff-base intermediate with acetoacetate' .
?pfsb8 faldo:position ?thisPositionOn10 ;
rdf:type faldo:ExactPosition .
?pfse9 faldo:position ?thisPositionOn11 ;
rdf:type faldo:ExactPosition .
_:232290 a rdf:Statement ;
up:attribution _:232280 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:232291 a rdf:Statement ;
up:attribution _:232281 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:232292 a rdf:Statement ;
up:attribution _:232282 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:232293 a rdf:Statement ;
up:attribution _:232283 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:232294 a rdf:Statement ;
up:attribution _:232284 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:232295 a rdf:Statement ;
up:attribution _:232285 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:456 .
_:232296 a rdf:Statement ;
up:attribution _:232286 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:210 .
_:232297 a rdf:Statement ;
up:attribution _:232287 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:704 .
_:232298 a rdf:Statement ;
up:attribution _:232288 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0047602 .
_:232299 a rdf:Statement ;
up:source unirule:MF_00597 ;
rdf:subject ?pfs6 ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:232300 a rdf:Statement ;
up:attribution _:232289 ;
rdf:subject ?pfs6 ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00597
#Rule MF_00597 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-11-28
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00597 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00597a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00597a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_00597a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00597a5')) AS ?annotation5) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch16 faldo:location ?templateMotifSequenceMatchRegionP2367017 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP2367019 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP23670MF_0059712 .
?templateMotifSequenceMatchRegionP2367017 faldo:begin ?templateMotifSequenceMatchBeginP2367018 .
?templateMotifSequenceMatchBeginP2367018 faldo:position ?templateMotifSequenceMatchBeginPositionP2367013 ;
faldo:reference isoform:P23670-1 .
?templateMotifSequenceProfileAlignmentOperationP2367019 edam:has_input signature:MF_00597 ;
rdf:type edam:operation_0300 .
?targetMotifMatch20 faldo:location ?targetMotifMatchRegionMatch21 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0059723 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP23670MF_0059714 .
?targetMotifMatchRegionMatch21 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0059722 .
?targetMotifMatchRegionMatchBeginMF_0059722 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0059715 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0059723 edam:has_input signature:MF_00597 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP23670MF_0059712, 1, (STRLEN(?templateMotifCigarP23670MF_0059712) - STRLEN(REPLACE(?templateMotifCigarP23670MF_0059712, CONCAT('^(?:-*[^-]){', STR(((115 - ?templateMotifSequenceMatchBeginPositionP2367013) + 1)), '}'), '')))), '[a-z]', '')) AS ?step124) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP23670MF_0059714, 1, (STRLEN(?targetMotifMatchCigarP23670MF_0059714) - STRLEN(REPLACE(?targetMotifMatchCigarP23670MF_0059714, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step124), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP23670MF_0059714, 1, (STRLEN(?targetMotifMatchCigarP23670MF_0059714) - STRLEN(REPLACE(?targetMotifMatchCigarP23670MF_0059714, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step124), '}'), '')))), '[^-]', ''))) AS ?step225) .
BIND(((?step225 + ?targetMotifMatchRegionMatchBeginPositionMF_0059715) - 1) AS ?thisPositionOn10) .
BIND(?thisPositionOn10 AS ?thisPositionOn11) .
BIND(?this AS ?pfs1t26) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb8) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse9) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn10, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_00597a7')) AS ?annotation7) .
BIND(?this AS ?pfs6) .
}
}
"xsd:string |
