| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-10 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-49 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-11 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-56 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-53 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-16 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-14 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-51 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-35 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-40 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-25 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-44 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-27 |
| http://purl.uniprot.org/unirules/MF_00650#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00650#construct-template-42 |
| http://purl.uniprot.org/unirules/MF_00650#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00650#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00650#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00650#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00650#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00650#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:248644 up:source unirule:MF_00650 .
_:248645 up:source unirule:MF_00650 .
_:248646 up:source unirule:MF_00650 .
_:248647 up:source unirule:MF_00650 .
_:248648 up:source unirule:MF_00650 .
_:248649 up:source unirule:MF_00650 .
_:248650 up:source unirule:MF_00650 .
_:248651 up:source unirule:MF_00650 .
_:248652 up:source unirule:MF_00650 .
_:248653 up:source unirule:MF_00650 .
_:248654 up:source unirule:MF_00650 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ;
up:classifiedWith GO:0016779 ,
keyword:548 ,
keyword:808 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.7.7.66' ;
up:fullName 'Phosphoribosyl-dephospho-CoA transferase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Malonate decarboxylase holo-[acyl-carrier-protein] synthase' ;
up:shortName 'Holo-ACP synthase' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'mdcG' .
?annotation3 a up:Function_Annotation ;
rdfs:comment "Transfers 2'-(5-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-[acyl-carrier-protein] of the malonate decarboxylase to yield holo-[acyl-carrier-protein]." .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the MdcG family.' .
?pfs7 up:annotation ?annotation8 .
?annotation8 faldo:begin ?pfsb9 ;
faldo:end ?pfse10 ;
rdf:type up:Active_Site_Annotation .
?pfsb9 faldo:position ?thisPositionOn11 ;
rdf:type faldo:ExactPosition .
?pfse10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfs13 up:annotation ?annotation14 .
?annotation14 faldo:begin ?pfsb15 ;
faldo:end ?pfse16 ;
rdf:type up:Active_Site_Annotation .
?pfsb15 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?pfse16 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
_:248655 a rdf:Statement ;
up:attribution _:248644 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:248656 a rdf:Statement ;
up:attribution _:248645 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:248657 a rdf:Statement ;
up:attribution _:248646 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:248658 a rdf:Statement ;
up:attribution _:248647 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:248659 a rdf:Statement ;
up:attribution _:248648 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:248660 a rdf:Statement ;
up:attribution _:248649 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:248661 a rdf:Statement ;
up:attribution _:248650 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:248662 a rdf:Statement ;
up:attribution _:248651 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:548 .
_:248663 a rdf:Statement ;
up:attribution _:248652 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016779 .
_:248664 a rdf:Statement ;
up:source unirule:MF_00650 ;
rdf:subject ?pfs7 ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:248665 a rdf:Statement ;
up:attribution _:248653 ;
rdf:subject ?pfs7 ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:248666 a rdf:Statement ;
up:source unirule:MF_00650 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:248667 a rdf:Statement ;
up:attribution _:248654 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00650
#Rule MF_00650 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-02
VALUES ?supertaxon19 {taxon:1236 taxon:41294}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00650 .
?thisOrganism rdfs:subClassOf+ ?supertaxon19 .
BIND(URI(CONCAT(STR(?this), '#MF_00650a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00650a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00650a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00650a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00650a6')) AS ?annotation6) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch24 faldo:location ?templateMotifSequenceMatchRegionP7142625 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP7142627 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP71426MF_0065020 .
?templateMotifSequenceMatchRegionP7142625 faldo:begin ?templateMotifSequenceMatchBeginP7142626 .
?templateMotifSequenceMatchBeginP7142626 faldo:position ?templateMotifSequenceMatchBeginPositionP7142621 ;
faldo:reference isoform:P71426-1 .
?templateMotifSequenceProfileAlignmentOperationP7142627 edam:has_input signature:MF_00650 ;
rdf:type edam:operation_0300 .
?targetMotifMatch28 faldo:location ?targetMotifMatchRegionMatch29 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0065031 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP71426MF_0065022 .
?targetMotifMatchRegionMatch29 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0065030 .
?targetMotifMatchRegionMatchBeginMF_0065030 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0065023 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0065031 edam:has_input signature:MF_00650 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP71426MF_0065020, 1, (STRLEN(?templateMotifCigarP71426MF_0065020) - STRLEN(REPLACE(?templateMotifCigarP71426MF_0065020, CONCAT('^(?:-*[^-]){', STR(((134 - ?templateMotifSequenceMatchBeginPositionP7142621) + 1)), '}'), '')))), '[a-z]', '')) AS ?step132) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP71426MF_0065022, 1, (STRLEN(?targetMotifMatchCigarP71426MF_0065022) - STRLEN(REPLACE(?targetMotifMatchCigarP71426MF_0065022, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step132), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP71426MF_0065022, 1, (STRLEN(?targetMotifMatchCigarP71426MF_0065022) - STRLEN(REPLACE(?targetMotifMatchCigarP71426MF_0065022, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step132), '}'), '')))), '[^-]', ''))) AS ?step233) .
BIND(((?step233 + ?targetMotifMatchRegionMatchBeginPositionMF_0065023) - 1) AS ?thisPositionOn11) .
BIND(?thisPositionOn11 AS ?thisPositionOn12) .
BIND(?this AS ?pfs1t34) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfsb9) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfse10) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn11, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_00650a8')) AS ?annotation8) .
BIND(?this AS ?pfs7) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch39 faldo:location ?templateMotifSequenceMatchRegionP7142640 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP7142642 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP71426MF_0065035 .
?templateMotifSequenceMatchRegionP7142640 faldo:begin ?templateMotifSequenceMatchBeginP7142641 .
?templateMotifSequenceMatchBeginP7142641 faldo:position ?templateMotifSequenceMatchBeginPositionP7142636 ;
faldo:reference isoform:P71426-1 .
?templateMotifSequenceProfileAlignmentOperationP7142642 edam:has_input signature:MF_00650 ;
rdf:type edam:operation_0300 .
?targetMotifMatch43 faldo:location ?targetMotifMatchRegionMatch44 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0065046 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP71426MF_0065037 .
?targetMotifMatchRegionMatch44 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0065045 .
?targetMotifMatchRegionMatchBeginMF_0065045 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0065038 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0065046 edam:has_input signature:MF_00650 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP71426MF_0065035, 1, (STRLEN(?templateMotifCigarP71426MF_0065035) - STRLEN(REPLACE(?templateMotifCigarP71426MF_0065035, CONCAT('^(?:-*[^-]){', STR(((136 - ?templateMotifSequenceMatchBeginPositionP7142636) + 1)), '}'), '')))), '[a-z]', '')) AS ?step147) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP71426MF_0065037, 1, (STRLEN(?targetMotifMatchCigarP71426MF_0065037) - STRLEN(REPLACE(?targetMotifMatchCigarP71426MF_0065037, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP71426MF_0065037, 1, (STRLEN(?targetMotifMatchCigarP71426MF_0065037) - STRLEN(REPLACE(?targetMotifMatchCigarP71426MF_0065037, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), '')))), '[^-]', ''))) AS ?step248) .
BIND(((?step248 + ?targetMotifMatchRegionMatchBeginPositionMF_0065038) - 1) AS ?thisPositionOn17) .
BIND(?thisPositionOn17 AS ?thisPositionOn18) .
BIND(?this AS ?pfs1t49) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb15) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse16) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn17, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_00650a14')) AS ?annotation14) .
BIND(?this AS ?pfs13) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_00650 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00650#construct |
