| http://purl.uniprot.org/unirules/MF_00710#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00710#construct-template-35 |
| http://purl.uniprot.org/unirules/MF_00710#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00710#construct-template-49 |
| http://purl.uniprot.org/unirules/MF_00710#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00710#construct-template-37 |
| http://purl.uniprot.org/unirules/MF_00710#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00710#construct-template-29 |
| http://purl.uniprot.org/unirules/MF_00710#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00710#construct-template-24 |
| http://purl.uniprot.org/unirules/MF_00710#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00710#construct-template-46 |
| http://purl.uniprot.org/unirules/MF_00710#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00710#construct-template-50 |
| http://purl.uniprot.org/unirules/MF_00710#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00710#construct-template-44 |
| http://purl.uniprot.org/unirules/MF_00710#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00710#construct-template-48 |
| http://purl.uniprot.org/unirules/MF_00710#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00710#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00710#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00710#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00710#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00710#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:262698 up:source unirule:MF_00710 .
_:262699 up:source unirule:MF_00710 .
_:262700 up:source unirule:MF_00710 .
_:262701 up:source unirule:MF_00710 .
_:262702 up:source unirule:MF_00710 .
_:262703 up:source unirule:MF_00710 .
_:262704 up:source unirule:MF_00710 .
_:262705 up:source unirule:MF_00710 .
_:262706 up:source unirule:MF_00710 .
_:262707 up:source unirule:MF_00710 .
_:262708 up:source unirule:MF_00710 .
_:262709 up:source unirule:MF_00710 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation7 ;
up:classifiedWith GO:0000036 ,
GO:0005737 ,
keyword:597 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:fullName 'Malonate decarboxylase acyl carrier protein' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Malonate decarboxylase subunit delta' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'mdcC' .
?annotation3 a up:Function_Annotation ;
rdfs:comment "Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism." .
?annotation4 a up:Subcellular_Location_Annotation .
?annotation4li5 up:cellularComponent .
?annotation6 a up:PTM_Annotation ;
rdfs:comment 'Covalently binds the prosthetic group of malonate decarboxylase.' .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the MdcC family.' .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
rdf:type up:Modified_Residue_Annotation ;
rdfs:comment 'O-(phosphoribosyl dephospho-coenzyme A)serine' .
?pfsb10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
_:262710 a rdf:Statement ;
up:attribution _:262698 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:262711 a rdf:Statement ;
up:attribution _:262699 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:262712 a rdf:Statement ;
up:attribution _:262700 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:262713 a rdf:Statement ;
up:attribution _:262701 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:262714 a rdf:Statement ;
up:attribution _:262702 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:262715 a rdf:Statement ;
up:attribution _:262703 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:262716 a rdf:Statement ;
up:attribution _:262704 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:262717 a rdf:Statement ;
up:attribution _:262705 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:262718 a rdf:Statement ;
up:attribution _:262706 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:597 .
_:262719 a rdf:Statement ;
up:attribution _:262707 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0000036 .
_:262720 a rdf:Statement ;
up:attribution _:262708 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:262721 a rdf:Statement ;
up:source unirule:MF_00710 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:262722 a rdf:Statement ;
up:attribution _:262709 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00710
#Rule MF_00710 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01
VALUES ?supertaxon14 {taxon:1236 taxon:41294}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00710 .
?thisOrganism rdfs:subClassOf+ ?supertaxon14 .
BIND(URI(CONCAT(STR(?this), '#MF_00710a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00710a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00710a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00710a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00710a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_00710a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch19 faldo:location ?templateMotifSequenceMatchRegionO3271220 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO3271222 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarO32712MF_0071015 .
?templateMotifSequenceMatchRegionO3271220 faldo:begin ?templateMotifSequenceMatchBeginO3271221 .
?templateMotifSequenceMatchBeginO3271221 faldo:position ?templateMotifSequenceMatchBeginPositionO3271216 ;
faldo:reference isoform:O32712-1 .
?templateMotifSequenceProfileAlignmentOperationO3271222 edam:has_input signature:MF_00710 ;
rdf:type edam:operation_0300 .
?targetMotifMatch23 faldo:location ?targetMotifMatchRegionMatch24 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0071026 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarO32712MF_0071017 .
?targetMotifMatchRegionMatch24 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0071025 .
?targetMotifMatchRegionMatchBeginMF_0071025 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0071018 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0071026 edam:has_input signature:MF_00710 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO32712MF_0071015, 1, (STRLEN(?templateMotifCigarO32712MF_0071015) - STRLEN(REPLACE(?templateMotifCigarO32712MF_0071015, CONCAT('^(?:-*[^-]){', STR(((25 - ?templateMotifSequenceMatchBeginPositionO3271216) + 1)), '}'), '')))), '[a-z]', '')) AS ?step127) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO32712MF_0071017, 1, (STRLEN(?targetMotifMatchCigarO32712MF_0071017) - STRLEN(REPLACE(?targetMotifMatchCigarO32712MF_0071017, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO32712MF_0071017, 1, (STRLEN(?targetMotifMatchCigarO32712MF_0071017) - STRLEN(REPLACE(?targetMotifMatchCigarO32712MF_0071017, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), '')))), '[^-]', ''))) AS ?step228) .
BIND(((?step228 + ?targetMotifMatchRegionMatchBeginPositionMF_0071018) - 1) AS ?thisPositionOn12) .
BIND(?thisPositionOn12 AS ?thisPositionOn13) .
BIND(?this AS ?pfs1t29) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn12, 1) = 'S')) .
BIND(URI(CONCAT(STR(?this), '#MF_00710a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_00710 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00710#construct |
