| http://purl.uniprot.org/unirules/MF_00718#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00718#construct-template-53 |
| http://purl.uniprot.org/unirules/MF_00718#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00718#construct-template-6 |
| http://purl.uniprot.org/unirules/MF_00718#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00718#construct-template-11 |
| http://purl.uniprot.org/unirules/MF_00718#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00718#construct-template-51 |
| http://purl.uniprot.org/unirules/MF_00718#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00718#construct-template-50 |
| http://purl.uniprot.org/unirules/MF_00718#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00718#construct-template-58 |
| http://purl.uniprot.org/unirules/MF_00718#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00718#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_00718#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00718#construct-template-33 |
| http://purl.uniprot.org/unirules/MF_00718#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00718#construct-template-57 |
| http://purl.uniprot.org/unirules/MF_00718#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00718#construct-template-30 |
| http://purl.uniprot.org/unirules/MF_00718#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00718#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_00718#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00718#construct-template-52 |
| http://purl.uniprot.org/unirules/MF_00718#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00718#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00718#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00718#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00718#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00718#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:265236 up:source unirule:MF_00718 .
_:265237 up:source unirule:MF_00718 .
_:265238 up:source unirule:MF_00718 .
_:265239 up:source unirule:MF_00718 .
_:265240 up:source unirule:MF_00718 .
_:265241 up:source unirule:MF_00718 .
_:265242 up:source unirule:MF_00718 .
_:265243 up:source unirule:MF_00718 .
_:265244 up:source unirule:MF_00718 .
_:265245 up:source unirule:MF_00718 .
_:265246 up:source unirule:MF_00718 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ;
up:classifiedWith GO:0005737 ,
GO:0016862 ,
keyword:413 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '5.3.2.-' ;
up:fullName 'Tautomerase PptA' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'pptA' .
?annotation2 a up:Subunit_Annotation ;
rdfs:comment 'Homodimer.' .
?annotation3 a up:Subcellular_Location_Annotation .
?annotation3li4 up:cellularComponent .
?annotation5 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the 4-oxalocrotonate tautomerase family. PptA subfamily.' .
?pfs6 up:annotation ?annotation7 .
?annotation7 faldo:begin ?pfsb8 ;
faldo:end ?pfse9 ;
rdf:type up:Initiator_Methionine_Annotation ;
rdfs:comment 'Removed' .
?pfsb8 faldo:position ?thisPositionOn10 ;
rdf:type faldo:ExactPosition .
?pfse9 faldo:position ?thisPositionOn11 ;
rdf:type faldo:ExactPosition .
?pfs12 up:annotation ?annotation13 .
?annotation13 faldo:begin ?pfsb14 ;
faldo:end ?pfse15 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Proton acceptor; via imino nitrogen' .
?pfsb14 faldo:position ?thisPositionOn16 ;
rdf:type faldo:ExactPosition .
?pfse15 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
_:265247 a rdf:Statement ;
up:attribution _:265236 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:265248 a rdf:Statement ;
up:attribution _:265237 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:265249 a rdf:Statement ;
up:attribution _:265238 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:265250 a rdf:Statement ;
up:attribution _:265239 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:265251 a rdf:Statement ;
up:attribution _:265240 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:265252 a rdf:Statement ;
up:attribution _:265241 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:265253 a rdf:Statement ;
up:attribution _:265242 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:413 .
_:265254 a rdf:Statement ;
up:attribution _:265243 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016862 .
_:265255 a rdf:Statement ;
up:attribution _:265244 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:265256 a rdf:Statement ;
up:source unirule:MF_00718 ;
rdf:subject ?pfs6 ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:265257 a rdf:Statement ;
up:attribution _:265245 ;
rdf:subject ?pfs6 ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:265258 a rdf:Statement ;
up:source unirule:MF_00718 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:265259 a rdf:Statement ;
up:attribution _:265246 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00718
#Rule MF_00718 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2019-11-18
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00718 .
?thisOrganism rdfs:subClassOf+ taxon:91347 .
BIND(URI(CONCAT(STR(?this), '#MF_00718a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00718a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_00718a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00718a5')) AS ?annotation5) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch22 faldo:location ?templateMotifSequenceMatchRegionP3199223 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3199225 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP31992MF_0071818 .
?templateMotifSequenceMatchRegionP3199223 faldo:begin ?templateMotifSequenceMatchBeginP3199224 .
?templateMotifSequenceMatchBeginP3199224 faldo:position ?templateMotifSequenceMatchBeginPositionP3199219 ;
faldo:reference isoform:P31992-1 .
?templateMotifSequenceProfileAlignmentOperationP3199225 edam:has_input signature:MF_00718 ;
rdf:type edam:operation_0300 .
?targetMotifMatch26 faldo:location ?targetMotifMatchRegionMatch27 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0071829 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP31992MF_0071820 .
?targetMotifMatchRegionMatch27 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0071828 .
?targetMotifMatchRegionMatchBeginMF_0071828 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0071821 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0071829 edam:has_input signature:MF_00718 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31992MF_0071818, 1, (STRLEN(?templateMotifCigarP31992MF_0071818) - STRLEN(REPLACE(?templateMotifCigarP31992MF_0071818, CONCAT('^(?:-*[^-]){', STR(((1 - ?templateMotifSequenceMatchBeginPositionP3199219) + 1)), '}'), '')))), '[a-z]', '')) AS ?step130) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31992MF_0071820, 1, (STRLEN(?targetMotifMatchCigarP31992MF_0071820) - STRLEN(REPLACE(?targetMotifMatchCigarP31992MF_0071820, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step130), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31992MF_0071820, 1, (STRLEN(?targetMotifMatchCigarP31992MF_0071820) - STRLEN(REPLACE(?targetMotifMatchCigarP31992MF_0071820, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step130), '}'), '')))), '[^-]', ''))) AS ?step231) .
BIND(((?step231 + ?targetMotifMatchRegionMatchBeginPositionMF_0071821) - 1) AS ?thisPositionOn10) .
BIND(?thisPositionOn10 AS ?thisPositionOn11) .
BIND(?this AS ?pfs1t32) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb8) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse9) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn10, 1) = 'M')) .
BIND(URI(CONCAT(STR(?this), '#MF_00718a7')) AS ?annotation7) .
BIND(?this AS ?pfs6) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch37 faldo:location ?templateMotifSequenceMatchRegionP3199238 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3199240 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP31992MF_0071833 .
?templateMotifSequenceMatchRegionP3199238 faldo:begin ?templateMotifSequenceMatchBeginP3199239 .
?templateMotifSequenceMatchBeginP3199239 faldo:position ?templateMotifSequenceMatchBeginPositionP3199234 ;
faldo:reference isoform:P31992-1 .
?templateMotifSequenceProfileAlignmentOperationP3199240 edam:has_input signature:MF_00718 ;
rdf:type edam:operation_0300 .
?targetMotifMatch41 faldo:location ?targetMotifMatchRegionMatch42 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0071844 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP31992MF_0071835 .
?targetMotifMatchRegionMatch42 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0071843 .
?targetMotifMatchRegionMatchBeginMF_0071843 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0071836 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0071844 edam:has_input signature:MF_00718 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31992MF_0071833, 1, (STRLEN(?templateMotifCigarP31992MF_0071833) - STRLEN(REPLACE(?templateMotifCigarP31992MF_0071833, CONCAT('^(?:-*[^-]){', STR(((2 - ?templateMotifSequenceMatchBeginPositionP3199234) + 1)), '}'), '')))), '[a-z]', '')) AS ?step145) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31992MF_0071835, 1, (STRLEN(?targetMotifMatchCigarP31992MF_0071835) - STRLEN(REPLACE(?targetMotifMatchCigarP31992MF_0071835, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31992MF_0071835, 1, (STRLEN(?targetMotifMatchCigarP31992MF_0071835) - STRLEN(REPLACE(?targetMotifMatchCigarP31992MF_0071835, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), '')))), '[^-]', ''))) AS ?step246) .
BIND(((?step246 + ?targetMotifMatchRegionMatchBeginPositionMF_0071836) - 1) AS ?thisPositionOn16) .
BIND(?thisPositionOn16 AS ?thisPositionOn17) .
BIND(?this AS ?pfs1t47) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb14) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse15) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1) = 'P')) .
BIND(URI(CONCAT(STR(?this), '#MF_00718a13')) AS ?annotation13) .
BIND(?this AS ?pfs12) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_00718 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00718#construct |
