| http://purl.uniprot.org/unirules/MF_00805#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:287807 up:source unirule:MF_00805 .
_:287808 up:source unirule:MF_00805 .
_:287809 up:source unirule:MF_00805 .
_:287810 up:source unirule:MF_00805 .
_:287811 up:source unirule:MF_00805 .
_:287812 up:source unirule:MF_00805 .
_:287813 up:source unirule:MF_00805 .
_:287814 up:source unirule:MF_00805 .
_:287815 up:source unirule:MF_00805 .
_:287816 up:source unirule:MF_00805 .
_:287817 up:source unirule:MF_00805 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation5 ,
?annotation7 ;
up:classifiedWith GO:0005737 ,
keyword:597 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:fullName 'Citrate lyase acyl carrier protein' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Citrate lyase gamma chain' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'citD' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Covalent carrier of the coenzyme of citrate lyase.' .
?annotation4 a up:Subunit_Annotation ;
rdfs:comment 'Oligomer with a subunit composition of (alpha,beta,gamma)6.' .
?annotation5 a up:Subcellular_Location_Annotation .
?annotation5li6 up:cellularComponent .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the CitD family.' .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
rdf:type up:Modified_Residue_Annotation ;
rdfs:comment 'O-(phosphoribosyl dephospho-coenzyme A)serine' .
?pfsb10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
_:287818 a rdf:Statement ;
up:attribution _:287807 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:287819 a rdf:Statement ;
up:attribution _:287808 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:287820 a rdf:Statement ;
up:attribution _:287809 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:287821 a rdf:Statement ;
up:attribution _:287810 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:287822 a rdf:Statement ;
up:attribution _:287811 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:287823 a rdf:Statement ;
up:attribution _:287812 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:287824 a rdf:Statement ;
up:attribution _:287813 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:287825 a rdf:Statement ;
up:attribution _:287814 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:287826 a rdf:Statement ;
up:attribution _:287815 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:597 .
_:287827 a rdf:Statement ;
up:attribution _:287816 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:287828 a rdf:Statement ;
up:source unirule:MF_00805 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:287829 a rdf:Statement ;
up:attribution _:287817 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00805
#Rule MF_00805 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00805 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00805a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00805a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00805a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00805a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00805a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_00805a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch18 faldo:location ?templateMotifSequenceMatchRegionP6933019 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP6933021 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP69330MF_0080514 .
?templateMotifSequenceMatchRegionP6933019 faldo:begin ?templateMotifSequenceMatchBeginP6933020 .
?templateMotifSequenceMatchBeginP6933020 faldo:position ?templateMotifSequenceMatchBeginPositionP6933015 ;
faldo:reference isoform:P69330-1 .
?templateMotifSequenceProfileAlignmentOperationP6933021 edam:has_input signature:MF_00805 ;
rdf:type edam:operation_0300 .
?targetMotifMatch22 faldo:location ?targetMotifMatchRegionMatch23 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0080525 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP69330MF_0080516 .
?targetMotifMatchRegionMatch23 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0080524 .
?targetMotifMatchRegionMatchBeginMF_0080524 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0080517 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0080525 edam:has_input signature:MF_00805 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69330MF_0080514, 1, (STRLEN(?templateMotifCigarP69330MF_0080514) - STRLEN(REPLACE(?templateMotifCigarP69330MF_0080514, CONCAT('^(?:-*[^-]){', STR(((14 - ?templateMotifSequenceMatchBeginPositionP6933015) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69330MF_0080516, 1, (STRLEN(?targetMotifMatchCigarP69330MF_0080516) - STRLEN(REPLACE(?targetMotifMatchCigarP69330MF_0080516, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69330MF_0080516, 1, (STRLEN(?targetMotifMatchCigarP69330MF_0080516) - STRLEN(REPLACE(?targetMotifMatchCigarP69330MF_0080516, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) .
BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0080517) - 1) AS ?thisPositionOn12) .
BIND(?thisPositionOn12 AS ?thisPositionOn13) .
BIND(?this AS ?pfs1t28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn12, 1) = 'S')) .
BIND(URI(CONCAT(STR(?this), '#MF_00805a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
}
"xsd:string |
