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http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-25
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-51
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-43
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-49
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-64
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-18
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-26
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-45
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-27
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-53
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-66
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-24
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-46
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-52
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-50
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-61
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-63
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-65
http://purl.uniprot.org/unirules/MF_00808#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00808#construct-template-60
http://purl.uniprot.org/unirules/MF_00808#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_00808#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_00808#construct-where-list-0
http://purl.uniprot.org/unirules/MF_00808#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00808#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00808#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:288577 up:source unirule:MF_00808 . _:288578 up:source unirule:MF_00808 . _:288579 up:source unirule:MF_00808 . _:288580 up:source unirule:MF_00808 . _:288581 up:source unirule:MF_00808 . _:288582 up:source unirule:MF_00808 . _:288583 up:source unirule:MF_00808 . _:288584 up:source unirule:MF_00808 . _:288585 up:source unirule:MF_00808 . _:288586 up:source unirule:MF_00808 . _:288587 up:source unirule:MF_00808 . _:288588 up:source unirule:MF_00808 . _:288589 up:source unirule:MF_00808 . _:288590 up:source unirule:MF_00808 . _:288591 up:source unirule:MF_00808 . _:288592 up:source unirule:MF_00808 . _:288593 up:source unirule:MF_00808 . ?this up:annotation ?annotation2 , ?annotation3 ; up:classifiedWith GO:0015979 , keyword:1133 , keyword:472 , keyword:602 , keyword:604 , keyword:812 ; up:recommendedName ?name0 . ?name0 up:fullName 'Photosystem II reaction center protein T' ; up:shortName 'PSII-T' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'psbT' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Found at the monomer-monomer interface of the photosystem II (PS II) dimer, plays a role in assembly and dimerization of PSII. PSII is a light-driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating a proton gradient subsequently used for ATP formation.' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the PsbT family.' . ?case4 up:classifiedWith GO:0009535 . ?case5 up:classifiedWith keyword:1003 , keyword:997 . ?case7 up:classifiedWith keyword:793 . ?case9 up:classifiedWith GO:0005886 . ?case10 up:classifiedWith GO:0042651 . ?pfs11 up:annotation ?annotation12 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb13 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . _:288594 a rdf:Statement ; up:attribution _:288577 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:288595 a rdf:Statement ; up:attribution _:288578 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:288596 a rdf:Statement ; up:attribution _:288579 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:288597 a rdf:Statement ; up:attribution _:288580 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:288598 a rdf:Statement ; up:attribution _:288581 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:602 . _:288599 a rdf:Statement ; up:attribution _:288582 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:604 . _:288600 a rdf:Statement ; up:attribution _:288583 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:288601 a rdf:Statement ; up:attribution _:288584 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:288602 a rdf:Statement ; up:attribution _:288585 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . _:288603 a rdf:Statement ; up:attribution _:288586 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0015979 . _:288604 a rdf:Statement ; up:attribution _:288587 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object GO:0009535 . _:288605 a rdf:Statement ; up:attribution _:288588 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1003 . _:288606 a rdf:Statement ; up:attribution _:288589 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:997 . _:288607 a rdf:Statement ; up:attribution _:288590 ; rdf:subject ?case7 ; rdf:predicate up:classifiedWith ; rdf:object keyword:793 . _:288608 a rdf:Statement ; up:attribution _:288591 ; rdf:subject ?case9 ; rdf:predicate up:classifiedWith ; rdf:object GO:0005886 . _:288609 a rdf:Statement ; up:attribution _:288592 ; rdf:subject ?case10 ; rdf:predicate up:classifiedWith ; rdf:object GO:0042651 . _:288610 a rdf:Statement ; up:source unirule:MF_00808 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:288611 a rdf:Statement ; up:attribution _:288593 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00808 #Rule MF_00808 Created by:? on:2005-03-09 Modified by:Andrea Auchincloss on:2023-07-24 { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00808 . ?thisOrganism rdfs:subClassOf+ taxon:1117 . } UNION { ?this rdfs:seeAlso signature:MF_00808 . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } UNION { ?this up:encodedIn up:Cyanelle . } UNION { ?this up:encodedIn up:Apicoplast . } UNION { ?this up:encodedIn up:Organellar_chromatophore . } UNION { ?this up:encodedIn up:Non-photosynthetic_plastid . } } BIND(URI(CONCAT(STR(?this), '#MF_00808a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00808a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00808a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch21 faldo:location ?templateMotifSequenceMatchRegionQ8DIQ022 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8DIQ024 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ8DIQ0MF_0080817 . ?templateMotifSequenceMatchRegionQ8DIQ022 faldo:begin ?templateMotifSequenceMatchBeginQ8DIQ023 . ?templateMotifSequenceMatchBeginQ8DIQ023 faldo:position ?templateMotifSequenceMatchBeginPositionQ8DIQ018 ; faldo:reference isoform:Q8DIQ0-1 . ?templateMotifSequenceProfileAlignmentOperationQ8DIQ024 edam:has_input signature:MF_00808 ; rdf:type edam:operation_0300 . ?targetMotifMatch25 faldo:location ?targetMotifMatchRegionMatch26 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0080828 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ8DIQ0MF_0080819 . ?targetMotifMatchRegionMatch26 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0080827 . ?targetMotifMatchRegionMatchBeginMF_0080827 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0080820 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0080828 edam:has_input signature:MF_00808 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8DIQ0MF_0080817, 1, (STRLEN(?templateMotifCigarQ8DIQ0MF_0080817) - STRLEN(REPLACE(?templateMotifCigarQ8DIQ0MF_0080817, CONCAT('^(?:-*[^-]){', STR(((3 - ?templateMotifSequenceMatchBeginPositionQ8DIQ018) + 1)), '}'), '')))), '[a-z]', '')) AS ?step129) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8DIQ0MF_0080819, 1, (STRLEN(?targetMotifMatchCigarQ8DIQ0MF_0080819) - STRLEN(REPLACE(?targetMotifMatchCigarQ8DIQ0MF_0080819, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step129), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8DIQ0MF_0080819, 1, (STRLEN(?targetMotifMatchCigarQ8DIQ0MF_0080819) - STRLEN(REPLACE(?targetMotifMatchCigarQ8DIQ0MF_0080819, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step129), '}'), '')))), '[^-]', ''))) AS ?step230) . BIND(((?step230 + ?targetMotifMatchRegionMatchBeginPositionMF_0080820) - 1) AS ?thisPositionOn15) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8DIQ0MF_0080817, 1, (STRLEN(?templateMotifCigarQ8DIQ0MF_0080817) - STRLEN(REPLACE(?templateMotifCigarQ8DIQ0MF_0080817, CONCAT('^(?:-*[^-]){', STR(((23 - ?templateMotifSequenceMatchBeginPositionQ8DIQ018) + 1)), '}'), '')))), '[a-z]', '')) AS ?step131) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8DIQ0MF_0080819, 1, (STRLEN(?targetMotifMatchCigarQ8DIQ0MF_0080819) - STRLEN(REPLACE(?targetMotifMatchCigarQ8DIQ0MF_0080819, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step131), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8DIQ0MF_0080819, 1, (STRLEN(?targetMotifMatchCigarQ8DIQ0MF_0080819) - STRLEN(REPLACE(?targetMotifMatchCigarQ8DIQ0MF_0080819, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step131), '}'), '')))), '[^-]', ''))) AS ?step232) . BIND(((?step232 + ?targetMotifMatchRegionMatchBeginPositionMF_0080820) - 1) AS ?thisPositionOn16) . BIND(?this AS ?pfs1t33) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse14) . FILTER ((BOUND(?thisPositionOn15) && BOUND(?thisPositionOn16))) . BIND(URI(CONCAT(STR(?this), '#MF_00808a12')) AS ?annotation12) . BIND(?this AS ?pfs11) . } OPTIONAL { ?this a up:Protein . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } BIND(?this AS ?case4) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:33071 . BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1117 . BIND(?this AS ?case6) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:33071 . })) . BIND(?this AS ?case7) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1117 . })) . BIND(?this AS ?case8) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:33071 . FILTER (! (EXISTS { { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } })) . BIND(?this AS ?case9) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } })) . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:33071 . })) . BIND(?this AS ?case10) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_00808http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00808#construct
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