| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-65 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-30 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-62 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-60 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-0 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-24 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-23 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-13 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-58 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-2 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-37 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-56 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-32 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-54 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-52 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_00836#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00836#construct-template-57 |
| http://purl.uniprot.org/unirules/MF_00836#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00836#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00836#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00836#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00836#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00836#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:296720 up:source unirule:MF_00836 .
_:296721 up:source unirule:MF_00836 .
_:296722 up:source unirule:MF_00836 .
_:296723 up:source unirule:MF_00836 .
_:296724 up:source unirule:MF_00836 .
_:296725 up:source unirule:MF_00836 .
_:296726 up:source unirule:MF_00836 .
_:296727 up:source unirule:MF_00836 .
_:296728 up:source unirule:MF_00836 .
_:296729 up:source unirule:MF_00836 .
_:296730 up:source unirule:MF_00836 .
_:296731 up:source unirule:MF_00836 .
_:296732 up:source unirule:MF_00836 .
_:296733 up:source unirule:MF_00836 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation7 ;
up:classifiedWith GO:0006015 ,
GO:0019634 ,
GO:0033863 ,
keyword:547 ,
keyword:67 ,
keyword:808 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.7.4.23' ;
up:fullName 'Ribose 1,5-bisphosphate phosphokinase PhnN' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Ribose 1,5-bisphosphokinase' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'phnN' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 a up:Pathway_Annotation ;
rdfs:comment 'Metabolic intermediate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate from D-ribose 5-phosphate (route II): step 3/3.' .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the ribose 1,5-bisphosphokinase family.' .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
up:ligand ?ligand12 ;
rdf:type up:Binding_Site_Annotation .
?pfsb10 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
?ligand12 rdfs:subClassOf chebi:30616 .
_:296734 a rdf:Statement ;
up:attribution _:296720 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:296735 a rdf:Statement ;
up:attribution _:296721 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:296736 a rdf:Statement ;
up:attribution _:296722 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:296737 a rdf:Statement ;
up:attribution _:296723 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:296738 a rdf:Statement ;
up:attribution _:296724 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:296739 a rdf:Statement ;
up:attribution _:296725 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:296740 a rdf:Statement ;
up:attribution _:296726 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:296741 a rdf:Statement ;
up:attribution _:296727 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:67 .
_:296742 a rdf:Statement ;
up:attribution _:296728 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:547 .
_:296743 a rdf:Statement ;
up:attribution _:296729 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:296744 a rdf:Statement ;
up:attribution _:296730 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0033863 .
_:296745 a rdf:Statement ;
up:attribution _:296731 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006015 .
_:296746 a rdf:Statement ;
up:attribution _:296732 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019634 .
_:296747 a rdf:Statement ;
up:source unirule:MF_00836 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:296748 a rdf:Statement ;
up:attribution _:296733 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00836
#Rule MF_00836 Created by:? on:2011-07-07 Modified by:Edouard de Castro on:2023-06-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00836 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00836a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00836a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00836a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00836a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00836a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_00836a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch19 faldo:location ?templateMotifSequenceMatchRegionP1669020 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP1669022 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP16690MF_0083615 .
?templateMotifSequenceMatchRegionP1669020 faldo:begin ?templateMotifSequenceMatchBeginP1669021 .
?templateMotifSequenceMatchBeginP1669021 faldo:position ?templateMotifSequenceMatchBeginPositionP1669016 ;
faldo:reference isoform:P16690-1 .
?templateMotifSequenceProfileAlignmentOperationP1669022 edam:has_input signature:MF_00836 ;
rdf:type edam:operation_0300 .
?targetMotifMatch23 faldo:location ?targetMotifMatchRegionMatch24 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0083626 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP16690MF_0083617 .
?targetMotifMatchRegionMatch24 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0083625 .
?targetMotifMatchRegionMatchBeginMF_0083625 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0083618 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0083626 edam:has_input signature:MF_00836 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP16690MF_0083615, 1, (STRLEN(?templateMotifCigarP16690MF_0083615) - STRLEN(REPLACE(?templateMotifCigarP16690MF_0083615, CONCAT('^(?:-*[^-]){', STR(((10 - ?templateMotifSequenceMatchBeginPositionP1669016) + 1)), '}'), '')))), '[a-z]', '')) AS ?step127) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP16690MF_0083617, 1, (STRLEN(?targetMotifMatchCigarP16690MF_0083617) - STRLEN(REPLACE(?targetMotifMatchCigarP16690MF_0083617, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP16690MF_0083617, 1, (STRLEN(?targetMotifMatchCigarP16690MF_0083617) - STRLEN(REPLACE(?targetMotifMatchCigarP16690MF_0083617, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), '')))), '[^-]', ''))) AS ?step228) .
BIND(((?step228 + ?targetMotifMatchRegionMatchBeginPositionMF_0083618) - 1) AS ?thisPositionOn13) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP16690MF_0083615, 1, (STRLEN(?templateMotifCigarP16690MF_0083615) - STRLEN(REPLACE(?templateMotifCigarP16690MF_0083615, CONCAT('^(?:-*[^-]){', STR(((17 - ?templateMotifSequenceMatchBeginPositionP1669016) + 1)), '}'), '')))), '[a-z]', '')) AS ?step129) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP16690MF_0083617, 1, (STRLEN(?targetMotifMatchCigarP16690MF_0083617) - STRLEN(REPLACE(?targetMotifMatchCigarP16690MF_0083617, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step129), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP16690MF_0083617, 1, (STRLEN(?targetMotifMatchCigarP16690MF_0083617) - STRLEN(REPLACE(?targetMotifMatchCigarP16690MF_0083617, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step129), '}'), '')))), '[^-]', ''))) AS ?step230) .
BIND(((?step230 + ?targetMotifMatchRegionMatchBeginPositionMF_0083618) - 1) AS ?thisPositionOn14) .
BIND(?this AS ?pfs1t31) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse11) .
FILTER (REGEX('GPSG[ASVG]GKD', SUBSTR(?thisSequenceValue, ?thisPositionOn13, (?thisPositionOn14 - ?thisPositionOn13)))) .
BIND(URI(CONCAT(STR(?this), '#MF_00836a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_00836 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00836#construct |
