| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-62 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-17 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-7 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-36 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-50 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-6 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-37 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-8 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-35 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-52 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-57 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-58 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-53 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-51 |
| http://purl.uniprot.org/unirules/MF_00907#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00907#construct-template-5 |
| http://purl.uniprot.org/unirules/MF_00907#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00907#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00907#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00907#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00907#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00907#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:315348 up:source unirule:MF_00907 .
_:315349 up:source unirule:MF_00907 .
_:315350 up:source unirule:MF_00907 .
_:315351 up:source unirule:MF_00907 .
_:315352 up:source unirule:MF_00907 .
_:315353 up:source unirule:MF_00907 .
_:315354 up:source unirule:MF_00907 .
_:315355 up:source unirule:MF_00907 .
_:315356 up:source unirule:MF_00907 .
_:315357 up:source unirule:MF_00907 .
_:315358 up:source unirule:MF_00907 .
_:315359 up:source unirule:MF_00907 .
_:315360 up:source unirule:MF_00907 .
_:315361 up:source unirule:MF_00907 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation5 ,
?annotation6 ,
?annotation8 ;
up:classifiedWith GO:0005737 ,
GO:0009239 ,
GO:0016790 ,
keyword:378 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '3.1.2.-' ;
up:fullName 'Proofreading thioesterase EntH' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Enterobactin synthase component H' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'entH' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Required for optimal enterobactin synthesis. Acts as a proofreading enzyme that prevents EntB misacylation by hydrolyzing the thioester bound existing between EntB and wrongly charged molecules.' .
?annotation4 a up:Pathway_Annotation ;
rdfs:comment 'Siderophore biosynthesis; enterobactin biosynthesis.' .
?annotation5 a up:Subunit_Annotation ;
rdfs:comment 'Homotetramer. Dimer of dimers. Interacts specifically with the aryl carrier protein (ArCP) domain of EntB.' .
?annotation6 a up:Subcellular_Location_Annotation .
?annotation6li7 up:cellularComponent .
?annotation8 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the thioesterase PaaI family.' .
?pfs9 up:annotation ?annotation10 .
?annotation10 faldo:begin ?pfsb11 ;
faldo:end ?pfse12 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Nucleophile or proton acceptor' .
?pfsb11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?pfse12 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
_:315362 a rdf:Statement ;
up:attribution _:315348 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:315363 a rdf:Statement ;
up:attribution _:315349 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:315364 a rdf:Statement ;
up:attribution _:315350 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:315365 a rdf:Statement ;
up:attribution _:315351 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:315366 a rdf:Statement ;
up:attribution _:315352 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:315367 a rdf:Statement ;
up:attribution _:315353 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:315368 a rdf:Statement ;
up:attribution _:315354 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:315369 a rdf:Statement ;
up:attribution _:315355 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:315370 a rdf:Statement ;
up:attribution _:315356 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:315371 a rdf:Statement ;
up:attribution _:315357 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:378 .
_:315372 a rdf:Statement ;
up:attribution _:315358 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016790 .
_:315373 a rdf:Statement ;
up:attribution _:315359 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0009239 .
_:315374 a rdf:Statement ;
up:attribution _:315360 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:315375 a rdf:Statement ;
up:source unirule:MF_00907 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:315376 a rdf:Statement ;
up:attribution _:315361 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00907
#Rule MF_00907 Created by:? on:2011-09-29 Modified by:Edouard de Castro on:2023-06-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00907 .
?thisOrganism rdfs:subClassOf+ taxon:91347 .
BIND(URI(CONCAT(STR(?this), '#MF_00907a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00907a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00907a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00907a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00907a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_00907a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_00907a8')) AS ?annotation8) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch19 faldo:location ?templateMotifSequenceMatchRegionP0A8Y820 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A8Y822 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A8Y8MF_0090715 .
?templateMotifSequenceMatchRegionP0A8Y820 faldo:begin ?templateMotifSequenceMatchBeginP0A8Y821 .
?templateMotifSequenceMatchBeginP0A8Y821 faldo:position ?templateMotifSequenceMatchBeginPositionP0A8Y816 ;
faldo:reference isoform:P0A8Y8-1 .
?templateMotifSequenceProfileAlignmentOperationP0A8Y822 edam:has_input signature:MF_00907 ;
rdf:type edam:operation_0300 .
?targetMotifMatch23 faldo:location ?targetMotifMatchRegionMatch24 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0090726 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A8Y8MF_0090717 .
?targetMotifMatchRegionMatch24 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0090725 .
?targetMotifMatchRegionMatchBeginMF_0090725 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0090718 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0090726 edam:has_input signature:MF_00907 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A8Y8MF_0090715, 1, (STRLEN(?templateMotifCigarP0A8Y8MF_0090715) - STRLEN(REPLACE(?templateMotifCigarP0A8Y8MF_0090715, CONCAT('^(?:-*[^-]){', STR(((63 - ?templateMotifSequenceMatchBeginPositionP0A8Y816) + 1)), '}'), '')))), '[a-z]', '')) AS ?step127) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A8Y8MF_0090717, 1, (STRLEN(?targetMotifMatchCigarP0A8Y8MF_0090717) - STRLEN(REPLACE(?targetMotifMatchCigarP0A8Y8MF_0090717, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A8Y8MF_0090717, 1, (STRLEN(?targetMotifMatchCigarP0A8Y8MF_0090717) - STRLEN(REPLACE(?targetMotifMatchCigarP0A8Y8MF_0090717, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), '')))), '[^-]', ''))) AS ?step228) .
BIND(((?step228 + ?targetMotifMatchRegionMatchBeginPositionMF_0090718) - 1) AS ?thisPositionOn13) .
BIND(?thisPositionOn13 AS ?thisPositionOn14) .
BIND(?this AS ?pfs1t29) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb11) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse12) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn13, 1) = 'E')) .
BIND(URI(CONCAT(STR(?this), '#MF_00907a10')) AS ?annotation10) .
BIND(?this AS ?pfs9) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_00907 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00907#construct |
