| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-25 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-38 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-3 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-37 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-13 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-56 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-32 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-5 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-58 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-49 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-41 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-62 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-48 |
| http://purl.uniprot.org/unirules/MF_00932#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00932#construct-template-60 |
| http://purl.uniprot.org/unirules/MF_00932#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00932#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00932#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00932#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00932#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00932#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:324119 up:source unirule:MF_00932 .
_:324120 up:source unirule:MF_00932 .
_:324121 up:source unirule:MF_00932 .
_:324122 up:source unirule:MF_00932 .
_:324123 up:source unirule:MF_00932 .
_:324124 up:source unirule:MF_00932 .
_:324125 up:source unirule:MF_00932 .
_:324126 up:source unirule:MF_00932 .
_:324127 up:source unirule:MF_00932 .
_:324128 up:source unirule:MF_00932 .
_:324129 up:source unirule:MF_00932 .
_:324130 up:source unirule:MF_00932 .
_:324131 up:source unirule:MF_00932 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation4 ,
?annotation6 ;
up:classifiedWith GO:0015035 ,
GO:0042597 ,
keyword:574 ,
keyword:676 ;
up:recommendedName ?name0 .
?name0 up:fullName 'Thiol:disulfide interchange protein DsbL' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'dsbL' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins. Part of a redox system composed of DsbI and DsbL that mediates formation of an essential disulfide bond in AssT.' .
?annotation3 a up:Subunit_Annotation ;
rdfs:comment 'Interacts with DsbI.' .
?annotation4 a up:Subcellular_Location_Annotation .
?annotation4li5 up:cellularComponent .
?annotation6 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the thioredoxin family. DsbL subfamily.' .
?case7 up:classifiedWith keyword:1015 .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
rdf:type up:Disulfide_Bond_Annotation ;
rdfs:comment 'Redox-active' .
?pfsb10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?sam14 up:classifiedWith keyword:732 .
?signal15 faldo:begin ?signalb16 ;
faldo:end ?signale17 .
?signalb16 faldo:position ?signalbp18 .
?signale17 faldo:position ?signalep19 .
?keyword20 up:range ?signal15 .
_:324132 a rdf:Statement ;
up:attribution _:324119 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:324133 a rdf:Statement ;
up:attribution _:324120 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:324134 a rdf:Statement ;
up:attribution _:324121 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:324135 a rdf:Statement ;
up:attribution _:324122 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:324136 a rdf:Statement ;
up:attribution _:324123 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:324137 a rdf:Statement ;
up:attribution _:324124 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:324138 a rdf:Statement ;
up:attribution _:324125 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:574 .
_:324139 a rdf:Statement ;
up:attribution _:324126 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:676 .
_:324140 a rdf:Statement ;
up:attribution _:324127 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0015035 .
_:324141 a rdf:Statement ;
up:attribution _:324128 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0042597 .
_:324142 a rdf:Statement ;
up:attribution _:324129 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1015 .
_:324143 a rdf:Statement ;
up:source unirule:MF_00932 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:324144 a rdf:Statement ;
up:attribution _:324130 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:324145 a rdf:Statement ;
up:attribution _:324131 ;
rdf:subject ?sam14 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:732 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00932
#Rule MF_00932 Created by:? on:2013-01-15 Modified by:Catherine Rivoire on:2021-06-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00932 .
?thisOrganism rdfs:subClassOf+ taxon:91347 .
BIND(URI(CONCAT(STR(?this), '#MF_00932a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00932a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_00932a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00932a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00932a6')) AS ?annotation6) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch25 faldo:location ?templateMotifSequenceMatchRegionP0A4L726 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A4L728 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A4L7MF_0093221 .
?templateMotifSequenceMatchRegionP0A4L726 faldo:begin ?templateMotifSequenceMatchBeginP0A4L727 .
?templateMotifSequenceMatchBeginP0A4L727 faldo:position ?templateMotifSequenceMatchBeginPositionP0A4L722 ;
faldo:reference isoform:P0A4L7-1 .
?templateMotifSequenceProfileAlignmentOperationP0A4L728 edam:has_input signature:MF_00932 ;
rdf:type edam:operation_0300 .
?targetMotifMatch29 faldo:location ?targetMotifMatchRegionMatch30 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0093232 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A4L7MF_0093223 .
?targetMotifMatchRegionMatch30 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0093231 .
?targetMotifMatchRegionMatchBeginMF_0093231 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0093224 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0093232 edam:has_input signature:MF_00932 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagdisulf) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A4L7MF_0093221, 1, (STRLEN(?templateMotifCigarP0A4L7MF_0093221) - STRLEN(REPLACE(?templateMotifCigarP0A4L7MF_0093221, CONCAT('^(?:-*[^-]){', STR(((56 - ?templateMotifSequenceMatchBeginPositionP0A4L722) + 1)), '}'), '')))), '[a-z]', '')) AS ?step133) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A4L7MF_0093223, 1, (STRLEN(?targetMotifMatchCigarP0A4L7MF_0093223) - STRLEN(REPLACE(?targetMotifMatchCigarP0A4L7MF_0093223, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step133), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A4L7MF_0093223, 1, (STRLEN(?targetMotifMatchCigarP0A4L7MF_0093223) - STRLEN(REPLACE(?targetMotifMatchCigarP0A4L7MF_0093223, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step133), '}'), '')))), '[^-]', ''))) AS ?step234) .
BIND(((?step234 + ?targetMotifMatchRegionMatchBeginPositionMF_0093224) - 1) AS ?thisPositionOn12) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A4L7MF_0093221, 1, (STRLEN(?templateMotifCigarP0A4L7MF_0093221) - STRLEN(REPLACE(?templateMotifCigarP0A4L7MF_0093221, CONCAT('^(?:-*[^-]){', STR(((59 - ?templateMotifSequenceMatchBeginPositionP0A4L722) + 1)), '}'), '')))), '[a-z]', '')) AS ?step135) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A4L7MF_0093223, 1, (STRLEN(?targetMotifMatchCigarP0A4L7MF_0093223) - STRLEN(REPLACE(?targetMotifMatchCigarP0A4L7MF_0093223, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step135), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A4L7MF_0093223, 1, (STRLEN(?targetMotifMatchCigarP0A4L7MF_0093223) - STRLEN(REPLACE(?targetMotifMatchCigarP0A4L7MF_0093223, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step135), '}'), '')))), '[^-]', ''))) AS ?step236) .
BIND(((?step236 + ?targetMotifMatchRegionMatchBeginPositionMF_0093224) - 1) AS ?thisPositionOn13) .
BIND(?this AS ?pfs1t37) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse11) .
FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn12, (?thisPositionOn13 - ?thisPositionOn12)))) .
BIND(URI(CONCAT(STR(?this), '#MF_00932a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag38) .
}
BIND(IF(BOUND(?tagdisulf), ?caseWithTag38, ?UNBOUND_VARIABLE) AS ?case7) .
OPTIONAL {
?this up:annotation ?samsignal39 ;
up:sequence ?thisSequence .
?samsignal39 up:range ?samsignalr40 ;
rdf:type up:Signal_Peptide_Annotation .
?samsignalr40 faldo:begin ?samsignalb41 ;
faldo:end ?samsignale42 .
?samsignalb41 faldo:position ?samsignalbp43 ;
faldo:reference ?thisSequence .
?samsignale42 faldo:position ?samsignalep44 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam14) .
}
BIND(URI(CONCAT(STR(?this), '#MF_00932a20')) AS ?keyword20) .
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_00932 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00932#construct |
