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SubjectPredicateObject
http://purl.uniprot.org/unirules/MF_00944#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00944#construct-template-46
http://purl.uniprot.org/unirules/MF_00944#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_00944#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_00944#construct-where-list-0
http://purl.uniprot.org/unirules/MF_00944#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00944#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00944#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:329029 up:source unirule:MF_00944 . _:329030 up:source unirule:MF_00944 . _:329031 up:source unirule:MF_00944 . _:329032 up:source unirule:MF_00944 . _:329033 up:source unirule:MF_00944 . _:329034 up:source unirule:MF_00944 . _:329035 up:source unirule:MF_00944 . _:329036 up:source unirule:MF_00944 . _:329037 up:source unirule:MF_00944 . _:329038 up:source unirule:MF_00944 . _:329039 up:source unirule:MF_00944 . ?this up:annotation ?annotation2 , ?annotation3 ; up:classifiedWith GO:0005524 , GO:0016887 , GO:0043022 , GO:0043023 , keyword:547 , keyword:67 ; up:recommendedName ?name0 . ?name0 up:fullName 'Ribosome-binding ATPase YchF' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'ychF' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily.' . ?pfs4 up:annotation ?annotation5 . ?annotation5 faldo:begin ?pfsb6 ; faldo:end ?pfse7 ; up:ligand ?ligand8 ; rdf:type up:Binding_Site_Annotation . ?pfsb6 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . ?pfse7 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?ligand8 rdfs:subClassOf chebi:30616 . _:329040 a rdf:Statement ; up:attribution _:329029 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:329041 a rdf:Statement ; up:attribution _:329030 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:329042 a rdf:Statement ; up:attribution _:329031 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:329043 a rdf:Statement ; up:attribution _:329032 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:329044 a rdf:Statement ; up:attribution _:329033 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:329045 a rdf:Statement ; up:attribution _:329034 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:329046 a rdf:Statement ; up:attribution _:329035 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:329047 a rdf:Statement ; up:attribution _:329036 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016887 . _:329048 a rdf:Statement ; up:attribution _:329037 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0043023 . _:329049 a rdf:Statement ; up:attribution _:329038 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0043022 . _:329050 a rdf:Statement ; up:source unirule:MF_00944 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:329051 a rdf:Statement ; up:attribution _:329039 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00944 #Rule MF_00944 Created by:? on:2013-02-20 Modified by:Edouard de Castro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00944 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_00944a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00944a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00944a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch15 faldo:location ?templateMotifSequenceMatchRegionP0ABU216 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ABU218 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ABU2MF_0094411 . ?templateMotifSequenceMatchRegionP0ABU216 faldo:begin ?templateMotifSequenceMatchBeginP0ABU217 . ?templateMotifSequenceMatchBeginP0ABU217 faldo:position ?templateMotifSequenceMatchBeginPositionP0ABU212 ; faldo:reference isoform:P0ABU2-1 . ?templateMotifSequenceProfileAlignmentOperationP0ABU218 edam:has_input signature:MF_00944 ; rdf:type edam:operation_0300 . ?targetMotifMatch19 faldo:location ?targetMotifMatchRegionMatch20 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0094422 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ABU2MF_0094413 . ?targetMotifMatchRegionMatch20 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0094421 . ?targetMotifMatchRegionMatchBeginMF_0094421 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0094414 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0094422 edam:has_input signature:MF_00944 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABU2MF_0094411, 1, (STRLEN(?templateMotifCigarP0ABU2MF_0094411) - STRLEN(REPLACE(?templateMotifCigarP0ABU2MF_0094411, CONCAT('^(?:-*[^-]){', STR(((12 - ?templateMotifSequenceMatchBeginPositionP0ABU212) + 1)), '}'), '')))), '[a-z]', '')) AS ?step123) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABU2MF_0094413, 1, (STRLEN(?targetMotifMatchCigarP0ABU2MF_0094413) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABU2MF_0094413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step123), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABU2MF_0094413, 1, (STRLEN(?targetMotifMatchCigarP0ABU2MF_0094413) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABU2MF_0094413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step123), '}'), '')))), '[^-]', ''))) AS ?step224) . BIND(((?step224 + ?targetMotifMatchRegionMatchBeginPositionMF_0094414) - 1) AS ?thisPositionOn9) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABU2MF_0094411, 1, (STRLEN(?templateMotifCigarP0ABU2MF_0094411) - STRLEN(REPLACE(?templateMotifCigarP0ABU2MF_0094411, CONCAT('^(?:-*[^-]){', STR(((17 - ?templateMotifSequenceMatchBeginPositionP0ABU212) + 1)), '}'), '')))), '[a-z]', '')) AS ?step125) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABU2MF_0094413, 1, (STRLEN(?targetMotifMatchCigarP0ABU2MF_0094413) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABU2MF_0094413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABU2MF_0094413, 1, (STRLEN(?targetMotifMatchCigarP0ABU2MF_0094413) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABU2MF_0094413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), '')))), '[^-]', ''))) AS ?step226) . BIND(((?step226 + ?targetMotifMatchRegionMatchBeginPositionMF_0094414) - 1) AS ?thisPositionOn10) . BIND(?this AS ?pfs1t27) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfsb6) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfse7) . FILTER (REGEX('N[ARNDCQEGHILKMFPSTWYVBZJUOX]GK[ST][TS]', SUBSTR(?thisSequenceValue, ?thisPositionOn9, (?thisPositionOn10 - ?thisPositionOn9)))) . BIND(URI(CONCAT(STR(?this), '#MF_00944a5')) AS ?annotation5) . BIND(?this AS ?pfs4) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_00944http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00944#construct
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