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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00971#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00971#construct-template-33 |
| http://purl.uniprot.org/unirules/MF_00971#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00971#construct-template-2 |
| http://purl.uniprot.org/unirules/MF_00971#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00971#construct-template-50 |
| http://purl.uniprot.org/unirules/MF_00971#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00971#construct-template-15 |
| http://purl.uniprot.org/unirules/MF_00971#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00971#construct-template-6 |
| http://purl.uniprot.org/unirules/MF_00971#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00971#construct-template-52 |
| http://purl.uniprot.org/unirules/MF_00971#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00971#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00971#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00971#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00971#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00971#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:338650 up:source unirule:MF_00971 . _:338651 up:source unirule:MF_00971 . _:338652 up:source unirule:MF_00971 . _:338653 up:source unirule:MF_00971 . _:338654 up:source unirule:MF_00971 . _:338655 up:source unirule:MF_00971 . _:338656 up:source unirule:MF_00971 . _:338657 up:source unirule:MF_00971 . _:338658 up:source unirule:MF_00971 . _:338659 up:source unirule:MF_00971 . _:338660 up:source unirule:MF_00971 . _:338661 up:source unirule:MF_00971 . ?this up:annotation ?annotation2 , ?annotation3 , ?annotation4 ; up:classifiedWith GO:0003677 , GO:0005524 , keyword:238 , keyword:378 , keyword:547 , keyword:67 ; up:recommendedName ?name0 . ?name0 up:fullName 'DNA-binding protein MutS2' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'mutS2' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Has ATPase and non-specific DNA-binding activities.' . ?annotation3 up:cofactor chebi:60240 ; rdf:type up:Cofactor_Annotation . ?annotation4 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the DNA mismatch repair MutS family. Archaeal Muts2 subfamily.' . ?pfs5 up:annotation ?annotation6 . ?annotation6 faldo:begin ?pfsb7 ; faldo:end ?pfse8 ; up:ligand ?ligand9 ; rdf:type up:Binding_Site_Annotation . ?pfsb7 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfse8 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?ligand9 rdfs:subClassOf chebi:30616 . _:338662 a rdf:Statement ; up:attribution _:338650 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:338663 a rdf:Statement ; up:attribution _:338651 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:338664 a rdf:Statement ; up:attribution _:338652 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:338665 a rdf:Statement ; up:attribution _:338653 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:338666 a rdf:Statement ; up:attribution _:338654 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:338667 a rdf:Statement ; up:attribution _:338655 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:338668 a rdf:Statement ; up:attribution _:338656 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:238 . _:338669 a rdf:Statement ; up:attribution _:338657 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:338670 a rdf:Statement ; up:attribution _:338658 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:338671 a rdf:Statement ; up:attribution _:338659 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:338672 a rdf:Statement ; up:attribution _:338660 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003677 . _:338673 a rdf:Statement ; up:source unirule:MF_00971 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:338674 a rdf:Statement ; up:attribution _:338661 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00971 #Rule MF_00971 Created by:? on:2013-08-08 Modified by:Edouard de Castro on:2022-11-19 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00971 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(URI(CONCAT(STR(?this), '#MF_00971a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00971a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00971a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00971a4')) AS ?annotation4) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch16 faldo:location ?templateMotifSequenceMatchRegionQ8U3J217 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8U3J219 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ8U3J2MF_0097112 . ?templateMotifSequenceMatchRegionQ8U3J217 faldo:begin ?templateMotifSequenceMatchBeginQ8U3J218 . ?templateMotifSequenceMatchBeginQ8U3J218 faldo:position ?templateMotifSequenceMatchBeginPositionQ8U3J213 ; faldo:reference isoform:Q8U3J2-1 . ?templateMotifSequenceProfileAlignmentOperationQ8U3J219 edam:has_input signature:MF_00971 ; rdf:type edam:operation_0300 . ?targetMotifMatch20 faldo:location ?targetMotifMatchRegionMatch21 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0097123 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ8U3J2MF_0097114 . ?targetMotifMatchRegionMatch21 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0097122 . ?targetMotifMatchRegionMatchBeginMF_0097122 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0097115 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0097123 edam:has_input signature:MF_00971 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8U3J2MF_0097112, 1, (STRLEN(?templateMotifCigarQ8U3J2MF_0097112) - STRLEN(REPLACE(?templateMotifCigarQ8U3J2MF_0097112, CONCAT('^(?:-*[^-]){', STR(((380 - ?templateMotifSequenceMatchBeginPositionQ8U3J213) + 1)), '}'), '')))), '[a-z]', '')) AS ?step124) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8U3J2MF_0097114, 1, (STRLEN(?targetMotifMatchCigarQ8U3J2MF_0097114) - STRLEN(REPLACE(?targetMotifMatchCigarQ8U3J2MF_0097114, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step124), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8U3J2MF_0097114, 1, (STRLEN(?targetMotifMatchCigarQ8U3J2MF_0097114) - STRLEN(REPLACE(?targetMotifMatchCigarQ8U3J2MF_0097114, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step124), '}'), '')))), '[^-]', ''))) AS ?step225) . BIND(((?step225 + ?targetMotifMatchRegionMatchBeginPositionMF_0097115) - 1) AS ?thisPositionOn10) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8U3J2MF_0097112, 1, (STRLEN(?templateMotifCigarQ8U3J2MF_0097112) - STRLEN(REPLACE(?templateMotifCigarQ8U3J2MF_0097112, CONCAT('^(?:-*[^-]){', STR(((387 - ?templateMotifSequenceMatchBeginPositionQ8U3J213) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8U3J2MF_0097114, 1, (STRLEN(?targetMotifMatchCigarQ8U3J2MF_0097114) - STRLEN(REPLACE(?targetMotifMatchCigarQ8U3J2MF_0097114, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8U3J2MF_0097114, 1, (STRLEN(?targetMotifMatchCigarQ8U3J2MF_0097114) - STRLEN(REPLACE(?targetMotifMatchCigarQ8U3J2MF_0097114, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) . BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0097115) - 1) AS ?thisPositionOn11) . BIND(?this AS ?pfs1t28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb7) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse8) . FILTER (REGEX('G[ARNDCQEGHILKMFPSTWYVBZJUOX]N[ARNDCQEGHILKMFPSTWYVBZJUOX]GGK[TS]', SUBSTR(?thisSequenceValue, ?thisPositionOn10, (?thisPositionOn11 - ?thisPositionOn10)))) . BIND(URI(CONCAT(STR(?this), '#MF_00971a6')) AS ?annotation6) . BIND(?this AS ?pfs5) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_00971 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00971#construct |