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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00981#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00981#construct-template-34 |
| http://purl.uniprot.org/unirules/MF_00981#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00981#construct-template-35 |
| http://purl.uniprot.org/unirules/MF_00981#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00981#construct-template-36 |
| http://purl.uniprot.org/unirules/MF_00981#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00981#construct-template-37 |
| http://purl.uniprot.org/unirules/MF_00981#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00981#construct-template-38 |
| http://purl.uniprot.org/unirules/MF_00981#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00981#construct-template-39 |
| http://purl.uniprot.org/unirules/MF_00981#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00981#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00981#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00981#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00981#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00981#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:342183 up:source unirule:MF_00981 . _:342184 up:source unirule:MF_00981 . _:342185 up:source unirule:MF_00981 . _:342186 up:source unirule:MF_00981 . _:342187 up:source unirule:MF_00981 . _:342188 up:source unirule:MF_00981 . _:342189 up:source unirule:MF_00981 . _:342190 up:source unirule:MF_00981 . _:342191 up:source unirule:MF_00981 . _:342192 up:source unirule:MF_00981 . _:342193 up:source unirule:MF_00981 . _:342194 up:source unirule:MF_00981 . _:342195 up:source unirule:MF_00981 . ?this up:annotation ?annotation2 , ?annotation3 ; up:classifiedWith GO:0000160 , GO:0003677 , GO:0006355 , keyword:238 , keyword:597 , keyword:804 , keyword:805 , keyword:902 ; up:recommendedName ?name0 . ?name0 up:fullName 'Transcriptional regulatory protein RcsB' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'rcsB' . ?annotation2 a up:PTM_Annotation ; rdfs:comment 'Phosphorylated and activated by RcsD.' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the RcsB family.' . ?pfs6 up:annotation ?annotation7 . ?annotation7 faldo:begin ?pfsb8 ; faldo:end ?pfse9 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment '4-aspartylphosphate' . ?pfsb8 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfse9 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . _:342196 a rdf:Statement ; up:attribution _:342183 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:342197 a rdf:Statement ; up:attribution _:342184 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:342198 a rdf:Statement ; up:attribution _:342185 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:342199 a rdf:Statement ; up:attribution _:342186 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:342200 a rdf:Statement ; up:attribution _:342187 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:238 . _:342201 a rdf:Statement ; up:attribution _:342188 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:597 . _:342202 a rdf:Statement ; up:attribution _:342189 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:804 . _:342203 a rdf:Statement ; up:attribution _:342190 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:805 . _:342204 a rdf:Statement ; up:attribution _:342191 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:902 . _:342205 a rdf:Statement ; up:attribution _:342192 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003677 . _:342206 a rdf:Statement ; up:attribution _:342193 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000160 . _:342207 a rdf:Statement ; up:attribution _:342194 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006355 . _:342208 a rdf:Statement ; up:source unirule:MF_00981 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:342209 a rdf:Statement ; up:attribution _:342195 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00981 #Rule MF_00981 Created by:? on:2013-12-17 Modified by:Catherine Rivoire on:2022-06-28 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00981 . ?thisOrganism rdfs:subClassOf+ taxon:91347 . BIND(URI(CONCAT(STR(?this), '#MF_00981a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00981a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00981a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch16 faldo:location ?templateMotifSequenceMatchRegionP0DMC717 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0DMC719 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0DMC7MF_0098112 . ?templateMotifSequenceMatchRegionP0DMC717 faldo:begin ?templateMotifSequenceMatchBeginP0DMC718 . ?templateMotifSequenceMatchBeginP0DMC718 faldo:position ?templateMotifSequenceMatchBeginPositionP0DMC713 ; faldo:reference isoform:P0DMC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0DMC719 edam:has_input signature:MF_00981 ; rdf:type edam:operation_0300 . ?targetMotifMatch20 faldo:location ?targetMotifMatchRegionMatch21 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0098123 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0DMC7MF_0098114 . ?targetMotifMatchRegionMatch21 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0098122 . ?targetMotifMatchRegionMatchBeginMF_0098122 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0098115 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0098123 edam:has_input signature:MF_00981 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0DMC7MF_0098112, 1, (STRLEN(?templateMotifCigarP0DMC7MF_0098112) - STRLEN(REPLACE(?templateMotifCigarP0DMC7MF_0098112, CONCAT('^(?:-*[^-]){', STR(((56 - ?templateMotifSequenceMatchBeginPositionP0DMC713) + 1)), '}'), '')))), '[a-z]', '')) AS ?step124) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0DMC7MF_0098114, 1, (STRLEN(?targetMotifMatchCigarP0DMC7MF_0098114) - STRLEN(REPLACE(?targetMotifMatchCigarP0DMC7MF_0098114, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step124), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0DMC7MF_0098114, 1, (STRLEN(?targetMotifMatchCigarP0DMC7MF_0098114) - STRLEN(REPLACE(?targetMotifMatchCigarP0DMC7MF_0098114, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step124), '}'), '')))), '[^-]', ''))) AS ?step225) . BIND(((?step225 + ?targetMotifMatchRegionMatchBeginPositionMF_0098115) - 1) AS ?thisPositionOn10) . BIND(?thisPositionOn10 AS ?thisPositionOn11) . BIND(?this AS ?pfs1t26) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb8) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse9) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn10, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00981a7')) AS ?annotation7) . BIND(?this AS ?pfs6) . } OPTIONAL { ?this a up:Protein . VALUES ?supertaxon27 {taxon:561 taxon:620 taxon:590} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon27 . BIND(?this AS ?case4) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon28 {taxon:561 taxon:620 taxon:590} ?thisOrganism rdfs:subClassOf+ ?supertaxon28 . })) . BIND(?this AS ?case5) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_00981 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00981#construct |