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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00984#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00984#construct-template-31 |
| http://purl.uniprot.org/unirules/MF_00984#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00984#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_00984#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00984#construct-template-29 |
| http://purl.uniprot.org/unirules/MF_00984#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00984#construct-template-26 |
| http://purl.uniprot.org/unirules/MF_00984#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00984#construct-template-25 |
| http://purl.uniprot.org/unirules/MF_00984#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00984#construct-template-49 |
| http://purl.uniprot.org/unirules/MF_00984#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00984#construct-template-28 |
| http://purl.uniprot.org/unirules/MF_00984#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00984#construct-template-27 |
| http://purl.uniprot.org/unirules/MF_00984#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00984#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00984#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00984#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00984#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00984#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:343267 up:source unirule:MF_00984 . _:343268 up:source unirule:MF_00984 . _:343269 up:source unirule:MF_00984 . _:343270 up:source unirule:MF_00984 . _:343271 up:source unirule:MF_00984 . _:343272 up:source unirule:MF_00984 . _:343273 up:source unirule:MF_00984 . _:343274 up:source unirule:MF_00984 . _:343275 up:source unirule:MF_00984 . _:343276 up:source unirule:MF_00984 . _:343277 up:source unirule:MF_00984 . _:343278 up:source unirule:MF_00984 . ?this up:classifiedWith GO:0003697 , keyword:238 ; up:recommendedName ?name0 . ?name0 up:fullName 'Single-stranded DNA-binding protein' ; up:shortName 'SSB' ; rdf:type up:Structured_Name . ?case1 up:classifiedWith GO:0006260 , GO:0006281 , GO:0006310 , keyword:227 , keyword:233 , keyword:234 , keyword:235 . ?pfs3 up:annotation ?annotation4 . ?annotation4 faldo:begin ?pfsb5 ; faldo:end ?pfse6 ; rdf:type up:Motif_Annotation ; rdfs:comment 'Important for interaction with partner proteins' . ?pfsb5 faldo:position ?thisPositionOn7 ; rdf:type faldo:ExactPosition . ?pfse6 faldo:position ?thisPositionOn8 ; rdf:type faldo:ExactPosition . ?pfs9 up:annotation ?annotation10 . ?annotation10 faldo:begin ?pfsb11 ; faldo:end ?pfse12 ; rdf:type up:Nucleotide_Binding_Annotation . ?pfsb11 faldo:position ?thisPositionOn13 ; rdf:type faldo:ExactPosition . ?pfse12 faldo:position ?thisPositionOn14 ; rdf:type faldo:ExactPosition . _:343279 a rdf:Statement ; up:attribution _:343267 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:343280 a rdf:Statement ; up:attribution _:343268 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:238 . _:343281 a rdf:Statement ; up:attribution _:343269 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003697 . _:343282 a rdf:Statement ; up:attribution _:343270 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:227 . _:343283 a rdf:Statement ; up:attribution _:343271 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:233 . _:343284 a rdf:Statement ; up:attribution _:343272 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:234 . _:343285 a rdf:Statement ; up:attribution _:343273 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:235 . _:343286 a rdf:Statement ; up:attribution _:343274 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0006310 . _:343287 a rdf:Statement ; up:attribution _:343275 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0006281 . _:343288 a rdf:Statement ; up:attribution _:343276 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0006260 . _:343289 a rdf:Statement ; up:source unirule:MF_00984 ; rdf:subject ?pfs3 ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:343290 a rdf:Statement ; up:attribution _:343277 ; rdf:subject ?pfs3 ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:343291 a rdf:Statement ; up:source unirule:MF_00984 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:343292 a rdf:Statement ; up:attribution _:343278 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00984 #Rule MF_00984 Created by:? on:2014-01-15 Modified by:Edouard de Castro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00984 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_00984a0')) AS ?name0) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch19 faldo:location ?templateMotifSequenceMatchRegionP0AGE020 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AGE022 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0AGE0MF_0098415 . ?templateMotifSequenceMatchRegionP0AGE020 faldo:begin ?templateMotifSequenceMatchBeginP0AGE021 . ?templateMotifSequenceMatchBeginP0AGE021 faldo:position ?templateMotifSequenceMatchBeginPositionP0AGE016 ; faldo:reference isoform:P0AGE0-1 . ?templateMotifSequenceProfileAlignmentOperationP0AGE022 edam:has_input signature:MF_00984 ; rdf:type edam:operation_0300 . ?targetMotifMatch23 faldo:location ?targetMotifMatchRegionMatch24 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0098426 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0AGE0MF_0098417 . ?targetMotifMatchRegionMatch24 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0098425 . ?targetMotifMatchRegionMatchBeginMF_0098425 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0098418 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0098426 edam:has_input signature:MF_00984 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagmotif) . BIND((STRLEN(?thisSequenceValue) - 5) AS ?thisPositionOn7) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn8) . BIND(?this AS ?pfs1t27) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn7))) AS ?pfsb5) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn8))) AS ?pfse6) . FILTER (REGEX('[DE][DE][DE][IL]PF', SUBSTR(?thisSequenceValue, ?thisPositionOn7, (?thisPositionOn8 - ?thisPositionOn7)))) . BIND(URI(CONCAT(STR(?this), '#MF_00984a4')) AS ?annotation4) . BIND(?this AS ?pfs3) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch32 faldo:location ?templateMotifSequenceMatchRegionP0AGE033 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AGE035 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0AGE0MF_0098428 . ?templateMotifSequenceMatchRegionP0AGE033 faldo:begin ?templateMotifSequenceMatchBeginP0AGE034 . ?templateMotifSequenceMatchBeginP0AGE034 faldo:position ?templateMotifSequenceMatchBeginPositionP0AGE029 ; faldo:reference isoform:P0AGE0-1 . ?templateMotifSequenceProfileAlignmentOperationP0AGE035 edam:has_input signature:MF_00984 ; rdf:type edam:operation_0300 . ?targetMotifMatch36 faldo:location ?targetMotifMatchRegionMatch37 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0098439 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0AGE0MF_0098430 . ?targetMotifMatchRegionMatch37 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0098438 . ?targetMotifMatchRegionMatchBeginMF_0098438 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0098431 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0098439 edam:has_input signature:MF_00984 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AGE0MF_0098428, 1, (STRLEN(?templateMotifCigarP0AGE0MF_0098428) - STRLEN(REPLACE(?templateMotifCigarP0AGE0MF_0098428, CONCAT('^(?:-*[^-]){', STR(((55 - ?templateMotifSequenceMatchBeginPositionP0AGE029) + 1)), '}'), '')))), '[a-z]', '')) AS ?step140) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AGE0MF_0098430, 1, (STRLEN(?targetMotifMatchCigarP0AGE0MF_0098430) - STRLEN(REPLACE(?targetMotifMatchCigarP0AGE0MF_0098430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step140), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AGE0MF_0098430, 1, (STRLEN(?targetMotifMatchCigarP0AGE0MF_0098430) - STRLEN(REPLACE(?targetMotifMatchCigarP0AGE0MF_0098430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step140), '}'), '')))), '[^-]', ''))) AS ?step241) . BIND(((?step241 + ?targetMotifMatchRegionMatchBeginPositionMF_0098431) - 1) AS ?thisPositionOn13) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AGE0MF_0098428, 1, (STRLEN(?templateMotifCigarP0AGE0MF_0098428) - STRLEN(REPLACE(?templateMotifCigarP0AGE0MF_0098428, CONCAT('^(?:-*[^-]){', STR(((61 - ?templateMotifSequenceMatchBeginPositionP0AGE029) + 1)), '}'), '')))), '[a-z]', '')) AS ?step142) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AGE0MF_0098430, 1, (STRLEN(?targetMotifMatchCigarP0AGE0MF_0098430) - STRLEN(REPLACE(?targetMotifMatchCigarP0AGE0MF_0098430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step142), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AGE0MF_0098430, 1, (STRLEN(?targetMotifMatchCigarP0AGE0MF_0098430) - STRLEN(REPLACE(?targetMotifMatchCigarP0AGE0MF_0098430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step142), '}'), '')))), '[^-]', ''))) AS ?step243) . BIND(((?step243 + ?targetMotifMatchRegionMatchBeginPositionMF_0098431) - 1) AS ?thisPositionOn14) . BIND(?this AS ?pfs2t44) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb11) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse12) . FILTER (REGEX('WH[RS][VIL]V[LIV][FY]', SUBSTR(?thisSequenceValue, ?thisPositionOn13, (?thisPositionOn14 - ?thisPositionOn13)))) . BIND(URI(CONCAT(STR(?this), '#MF_00984a10')) AS ?annotation10) . BIND(?this AS ?pfs9) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag45) . } BIND(IF(BOUND(?tagmotif), ?caseWithTag45, ?UNBOUND_VARIABLE) AS ?case1) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1297 . })) . BIND(?this AS ?case2) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_00984 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00984#construct |