| http://purl.uniprot.org/unirules/MF_01045#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01045#construct-template-43 |
| http://purl.uniprot.org/unirules/MF_01045#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01045#construct-template-44 |
| http://purl.uniprot.org/unirules/MF_01045#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01045#construct-template-45 |
| http://purl.uniprot.org/unirules/MF_01045#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01045#construct-template-46 |
| http://purl.uniprot.org/unirules/MF_01045#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01045#construct-template-40 |
| http://purl.uniprot.org/unirules/MF_01045#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01045#construct-template-41 |
| http://purl.uniprot.org/unirules/MF_01045#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01045#construct-template-42 |
| http://purl.uniprot.org/unirules/MF_01045#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01045#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01045#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01045#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01045#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01045#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:367273 up:source unirule:MF_01045 .
_:367274 up:source unirule:MF_01045 .
_:367275 up:source unirule:MF_01045 .
_:367276 up:source unirule:MF_01045 .
_:367277 up:source unirule:MF_01045 .
_:367278 up:source unirule:MF_01045 .
_:367279 up:source unirule:MF_01045 .
_:367280 up:source unirule:MF_01045 .
_:367281 up:source unirule:MF_01045 .
_:367282 up:source unirule:MF_01045 .
_:367283 up:source unirule:MF_01045 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ,
?annotation6 ;
up:classifiedWith GO:0019148 ,
GO:0046416 ,
keyword:456 ;
up:recommendedName ?name0 .
?name0 up:ecName '4.4.1.15' ;
up:fullName 'D-cysteine desulfhydrase' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'dcyD' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the alpha,beta-elimination reaction of D-cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine.' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 a up:Subunit_Annotation ;
rdfs:comment 'Homodimer.' .
?annotation6 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the ACC deaminase/D-cysteine desulfhydrase family.' .
?case7 up:classifiedWith keyword:663 .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
rdf:type up:Modified_Residue_Annotation ;
rdfs:comment 'N6-(pyridoxal phosphate)lysine' .
?pfsb10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
_:367284 a rdf:Statement ;
up:attribution _:367273 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:367285 a rdf:Statement ;
up:attribution _:367274 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:367286 a rdf:Statement ;
up:attribution _:367275 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:367287 a rdf:Statement ;
up:attribution _:367276 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:367288 a rdf:Statement ;
up:attribution _:367277 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:367289 a rdf:Statement ;
up:attribution _:367278 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:367290 a rdf:Statement ;
up:attribution _:367279 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:456 .
_:367291 a rdf:Statement ;
up:attribution _:367280 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019148 .
_:367292 a rdf:Statement ;
up:attribution _:367281 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0046416 .
_:367293 a rdf:Statement ;
up:attribution _:367282 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:663 .
_:367294 a rdf:Statement ;
up:source unirule:MF_01045 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:367295 a rdf:Statement ;
up:attribution _:367283 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01045
#Rule MF_01045 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01045 .
?thisOrganism rdfs:subClassOf+ taxon:91347 .
BIND(URI(CONCAT(STR(?this), '#MF_01045a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01045a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_01045a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01045a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_01045a6')) AS ?annotation6) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch18 faldo:location ?templateMotifSequenceMatchRegionP7631619 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP7631621 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP76316MF_0104514 .
?templateMotifSequenceMatchRegionP7631619 faldo:begin ?templateMotifSequenceMatchBeginP7631620 .
?templateMotifSequenceMatchBeginP7631620 faldo:position ?templateMotifSequenceMatchBeginPositionP7631615 ;
faldo:reference isoform:P76316-1 .
?templateMotifSequenceProfileAlignmentOperationP7631621 edam:has_input signature:MF_01045 ;
rdf:type edam:operation_0300 .
?targetMotifMatch22 faldo:location ?targetMotifMatchRegionMatch23 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0104525 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP76316MF_0104516 .
?targetMotifMatchRegionMatch23 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0104524 .
?targetMotifMatchRegionMatchBeginMF_0104524 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0104517 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0104525 edam:has_input signature:MF_01045 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFT_1) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP76316MF_0104514, 1, (STRLEN(?templateMotifCigarP76316MF_0104514) - STRLEN(REPLACE(?templateMotifCigarP76316MF_0104514, CONCAT('^(?:-*[^-]){', STR(((51 - ?templateMotifSequenceMatchBeginPositionP7631615) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP76316MF_0104516, 1, (STRLEN(?targetMotifMatchCigarP76316MF_0104516) - STRLEN(REPLACE(?targetMotifMatchCigarP76316MF_0104516, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP76316MF_0104516, 1, (STRLEN(?targetMotifMatchCigarP76316MF_0104516) - STRLEN(REPLACE(?targetMotifMatchCigarP76316MF_0104516, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) .
BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0104517) - 1) AS ?thisPositionOn12) .
BIND(?thisPositionOn12 AS ?thisPositionOn13) .
BIND(?this AS ?pfs1t28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn12, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_01045a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag29) .
}
BIND(IF(BOUND(?tagFT_1), ?caseWithTag29, ?UNBOUND_VARIABLE) AS ?case7) .
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_01045 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01045#construct |
