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http://purl.uniprot.org/unirules/MF_01056#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01056#construct-template-44
http://purl.uniprot.org/unirules/MF_01056#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01056#construct-template-34
http://purl.uniprot.org/unirules/MF_01056#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01056#construct-template-47
http://purl.uniprot.org/unirules/MF_01056#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01056#construct-template-24
http://purl.uniprot.org/unirules/MF_01056#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01056#construct-template-48
http://purl.uniprot.org/unirules/MF_01056#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01056#construct-template-46
http://purl.uniprot.org/unirules/MF_01056#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01056#construct-template-55
http://purl.uniprot.org/unirules/MF_01056#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01056#construct-template-53
http://purl.uniprot.org/unirules/MF_01056#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_01056#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_01056#construct-where-list-0
http://purl.uniprot.org/unirules/MF_01056#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_01056#construct-template-list-0
http://purl.uniprot.org/unirules/MF_01056#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:370080 up:source unirule:MF_01056 . _:370081 up:source unirule:MF_01056 . _:370082 up:source unirule:MF_01056 . _:370083 up:source unirule:MF_01056 . _:370084 up:source unirule:MF_01056 . _:370085 up:source unirule:MF_01056 . _:370086 up:source unirule:MF_01056 . _:370087 up:source unirule:MF_01056 . _:370088 up:source unirule:MF_01056 . _:370089 up:source unirule:MF_01056 . _:370090 up:source unirule:MF_01056 . _:370091 up:source unirule:MF_01056 . ?this up:annotation ?annotation2 , ?annotation3 , ?annotation4 , ?annotation5 ; up:classifiedWith GO:0009437 , keyword:249 , keyword:274 , keyword:285 , keyword:813 ; up:recommendedName ?name0 . ?name0 up:fullName 'Protein FixB' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'fixB' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Required for anaerobic carnitine reduction. May bring reductant to CaiA.' . ?annotation3 a up:Pathway_Annotation ; rdfs:comment 'Amine and polyamine metabolism; carnitine metabolism.' . ?annotation4 a up:Subunit_Annotation ; rdfs:comment 'Heterodimer of FixA and FixB.' . ?annotation5 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the ETF alpha-subunit/FixB family.' . ?pfs6 up:annotation ?annotation7 . ?annotation7 faldo:begin ?pfsb8 ; faldo:end ?pfse9 ; up:ligand ?ligand10 ; rdf:type up:Binding_Site_Annotation . ?pfsb8 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?pfse9 faldo:position ?thisPositionOn12 ; rdf:type faldo:ExactPosition . ?ligand10 rdfs:subClassOf chebi:57692 . _:370092 a rdf:Statement ; up:attribution _:370080 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:370093 a rdf:Statement ; up:attribution _:370081 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:370094 a rdf:Statement ; up:attribution _:370082 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:370095 a rdf:Statement ; up:attribution _:370083 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:370096 a rdf:Statement ; up:attribution _:370084 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:370097 a rdf:Statement ; up:attribution _:370085 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:370098 a rdf:Statement ; up:attribution _:370086 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:813 . _:370099 a rdf:Statement ; up:attribution _:370087 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:249 . _:370100 a rdf:Statement ; up:attribution _:370088 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:285 . _:370101 a rdf:Statement ; up:attribution _:370089 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:274 . _:370102 a rdf:Statement ; up:attribution _:370090 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009437 . _:370103 a rdf:Statement ; up:source unirule:MF_01056 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:370104 a rdf:Statement ; up:attribution _:370091 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01056 #Rule MF_01056 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2022-11-19 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01056 . ?thisOrganism rdfs:subClassOf+ taxon:91347 . BIND(URI(CONCAT(STR(?this), '#MF_01056a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01056a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_01056a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01056a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_01056a5')) AS ?annotation5) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch17 faldo:location ?templateMotifSequenceMatchRegionP3157418 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3157420 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP31574MF_0105613 . ?templateMotifSequenceMatchRegionP3157418 faldo:begin ?templateMotifSequenceMatchBeginP3157419 . ?templateMotifSequenceMatchBeginP3157419 faldo:position ?templateMotifSequenceMatchBeginPositionP3157414 ; faldo:reference isoform:P31574-1 . ?templateMotifSequenceProfileAlignmentOperationP3157420 edam:has_input signature:MF_01056 ; rdf:type edam:operation_0300 . ?targetMotifMatch21 faldo:location ?targetMotifMatchRegionMatch22 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0105624 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP31574MF_0105615 . ?targetMotifMatchRegionMatch22 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0105623 . ?targetMotifMatchRegionMatchBeginMF_0105623 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0105616 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0105624 edam:has_input signature:MF_01056 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31574MF_0105613, 1, (STRLEN(?templateMotifCigarP31574MF_0105613) - STRLEN(REPLACE(?templateMotifCigarP31574MF_0105613, CONCAT('^(?:-*[^-]){', STR(((255 - ?templateMotifSequenceMatchBeginPositionP3157414) + 1)), '}'), '')))), '[a-z]', '')) AS ?step125) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31574MF_0105615, 1, (STRLEN(?targetMotifMatchCigarP31574MF_0105615) - STRLEN(REPLACE(?targetMotifMatchCigarP31574MF_0105615, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31574MF_0105615, 1, (STRLEN(?targetMotifMatchCigarP31574MF_0105615) - STRLEN(REPLACE(?targetMotifMatchCigarP31574MF_0105615, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), '')))), '[^-]', ''))) AS ?step226) . BIND(((?step226 + ?targetMotifMatchRegionMatchBeginPositionMF_0105616) - 1) AS ?thisPositionOn11) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31574MF_0105613, 1, (STRLEN(?templateMotifCigarP31574MF_0105613) - STRLEN(REPLACE(?templateMotifCigarP31574MF_0105613, CONCAT('^(?:-*[^-]){', STR(((283 - ?templateMotifSequenceMatchBeginPositionP3157414) + 1)), '}'), '')))), '[a-z]', '')) AS ?step127) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31574MF_0105615, 1, (STRLEN(?targetMotifMatchCigarP31574MF_0105615) - STRLEN(REPLACE(?targetMotifMatchCigarP31574MF_0105615, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31574MF_0105615, 1, (STRLEN(?targetMotifMatchCigarP31574MF_0105615) - STRLEN(REPLACE(?targetMotifMatchCigarP31574MF_0105615, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), '')))), '[^-]', ''))) AS ?step228) . BIND(((?step228 + ?targetMotifMatchRegionMatchBeginPositionMF_0105616) - 1) AS ?thisPositionOn12) . BIND(?this AS ?pfs1t29) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfsb8) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfse9) . FILTER ((BOUND(?thisPositionOn11) && BOUND(?thisPositionOn12))) . BIND(URI(CONCAT(STR(?this), '#MF_01056a7')) AS ?annotation7) . BIND(?this AS ?pfs6) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_01056http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_01056#construct
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