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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-44 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-67 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-3 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-37 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-52 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-1 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-66 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-30 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-65 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-28 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-54 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-39 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-56 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-17 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-11 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-29 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-48 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-15 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_01222#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01222#construct-template-57 |
| http://purl.uniprot.org/unirules/MF_01222#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01222#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01222#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01222#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01222#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01222#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:430681 up:source unirule:MF_01222 . _:430682 up:source unirule:MF_01222 . _:430683 up:source unirule:MF_01222 . _:430684 up:source unirule:MF_01222 . _:430685 up:source unirule:MF_01222 . _:430686 up:source unirule:MF_01222 . _:430687 up:source unirule:MF_01222 . _:430688 up:source unirule:MF_01222 . _:430689 up:source unirule:MF_01222 . _:430690 up:source unirule:MF_01222 . _:430691 up:source unirule:MF_01222 . ?this up:annotation ?annotation1 , ?annotation2 ; up:classifiedWith GO:0005509 , GO:0006388 , keyword:106 , keyword:479 , keyword:819 ; up:recommendedName ?name0 . ?name0 up:fullName 'Protein archease' ; rdf:type up:Structured_Name . ?annotation1 a up:Function_Annotation ; rdfs:comment 'Activates the tRNA-splicing ligase complex by facilitating the enzymatic turnover of catalytic subunit RtcB. Acts by promoting the guanylylation of RtcB, a key intermediate step in tRNA ligation. Can also alter the NTP specificity of RtcB such that ATP, dGTP or ITP is used efficiently.' . ?annotation2 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the archease family.' . ?pfs3 up:annotation ?annotation4 . ?annotation4 faldo:begin ?pfsb5 ; faldo:end ?pfse6 ; up:ligand ?ligand7 ; rdf:type up:Binding_Site_Annotation . ?pfsb5 faldo:position ?thisPositionOn8 ; rdf:type faldo:ExactPosition . ?pfse6 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . ?ligand7 rdfs:subClassOf chebi:29108 . ?pfs10 up:annotation ?annotation11 . ?annotation11 faldo:begin ?pfsb12 ; faldo:end ?pfse13 ; up:ligand ?ligand14 ; rdf:type up:Binding_Site_Annotation . ?pfsb12 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?ligand14 rdfs:subClassOf chebi:29108 . ?pfs17 up:annotation ?annotation18 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; up:ligand ?ligand21 ; rdf:type up:Binding_Site_Annotation . ?pfsb19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?ligand21 rdfs:subClassOf chebi:29108 . _:430692 a rdf:Statement ; up:attribution _:430681 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:430693 a rdf:Statement ; up:attribution _:430682 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:430694 a rdf:Statement ; up:attribution _:430683 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:430695 a rdf:Statement ; up:attribution _:430684 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:106 . _:430696 a rdf:Statement ; up:attribution _:430685 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:430697 a rdf:Statement ; up:attribution _:430686 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:819 . _:430698 a rdf:Statement ; up:attribution _:430687 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005509 . _:430699 a rdf:Statement ; up:attribution _:430688 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006388 . _:430700 a rdf:Statement ; up:source unirule:MF_01222 ; rdf:subject ?pfs3 ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:430701 a rdf:Statement ; up:attribution _:430689 ; rdf:subject ?pfs3 ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:430702 a rdf:Statement ; up:source unirule:MF_01222 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:430703 a rdf:Statement ; up:attribution _:430690 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:430704 a rdf:Statement ; up:source unirule:MF_01222 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:430705 a rdf:Statement ; up:attribution _:430691 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01222 #Rule MF_01222 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2022-11-19 VALUES ?supertaxon24 {taxon:2 taxon:2157} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01222 . ?thisOrganism rdfs:subClassOf+ ?supertaxon24 . BIND(URI(CONCAT(STR(?this), '#MF_01222a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01222a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_01222a2')) AS ?annotation2) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch29 faldo:location ?templateMotifSequenceMatchRegionO5920530 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO5920532 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarO59205MF_0122225 . ?templateMotifSequenceMatchRegionO5920530 faldo:begin ?templateMotifSequenceMatchBeginO5920531 . ?templateMotifSequenceMatchBeginO5920531 faldo:position ?templateMotifSequenceMatchBeginPositionO5920526 ; faldo:reference isoform:O59205-1 . ?templateMotifSequenceProfileAlignmentOperationO5920532 edam:has_input signature:MF_01222 ; rdf:type edam:operation_0300 . ?targetMotifMatch33 faldo:location ?targetMotifMatchRegionMatch34 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0122236 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarO59205MF_0122227 . ?targetMotifMatchRegionMatch34 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0122235 . ?targetMotifMatchRegionMatchBeginMF_0122235 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0122228 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0122236 edam:has_input signature:MF_01222 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO59205MF_0122225, 1, (STRLEN(?templateMotifCigarO59205MF_0122225) - STRLEN(REPLACE(?templateMotifCigarO59205MF_0122225, CONCAT('^(?:-*[^-]){', STR(((12 - ?templateMotifSequenceMatchBeginPositionO5920526) + 1)), '}'), '')))), '[a-z]', '')) AS ?step137) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO59205MF_0122227, 1, (STRLEN(?targetMotifMatchCigarO59205MF_0122227) - STRLEN(REPLACE(?targetMotifMatchCigarO59205MF_0122227, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step137), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO59205MF_0122227, 1, (STRLEN(?targetMotifMatchCigarO59205MF_0122227) - STRLEN(REPLACE(?targetMotifMatchCigarO59205MF_0122227, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step137), '}'), '')))), '[^-]', ''))) AS ?step238) . BIND(((?step238 + ?targetMotifMatchRegionMatchBeginPositionMF_0122228) - 1) AS ?thisPositionOn8) . BIND(?thisPositionOn8 AS ?thisPositionOn9) . BIND(?this AS ?pfs1t39) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn8))) AS ?pfsb5) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfse6) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn8, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01222a4')) AS ?annotation4) . BIND(?this AS ?pfs3) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch44 faldo:location ?templateMotifSequenceMatchRegionO5920545 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO5920547 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarO59205MF_0122240 . ?templateMotifSequenceMatchRegionO5920545 faldo:begin ?templateMotifSequenceMatchBeginO5920546 . ?templateMotifSequenceMatchBeginO5920546 faldo:position ?templateMotifSequenceMatchBeginPositionO5920541 ; faldo:reference isoform:O59205-1 . ?templateMotifSequenceProfileAlignmentOperationO5920547 edam:has_input signature:MF_01222 ; rdf:type edam:operation_0300 . ?targetMotifMatch48 faldo:location ?targetMotifMatchRegionMatch49 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0122251 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarO59205MF_0122242 . ?targetMotifMatchRegionMatch49 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0122250 . ?targetMotifMatchRegionMatchBeginMF_0122250 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0122243 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0122251 edam:has_input signature:MF_01222 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO59205MF_0122240, 1, (STRLEN(?templateMotifCigarO59205MF_0122240) - STRLEN(REPLACE(?templateMotifCigarO59205MF_0122240, CONCAT('^(?:-*[^-]){', STR(((141 - ?templateMotifSequenceMatchBeginPositionO5920541) + 1)), '}'), '')))), '[a-z]', '')) AS ?step152) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO59205MF_0122242, 1, (STRLEN(?targetMotifMatchCigarO59205MF_0122242) - STRLEN(REPLACE(?targetMotifMatchCigarO59205MF_0122242, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step152), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO59205MF_0122242, 1, (STRLEN(?targetMotifMatchCigarO59205MF_0122242) - STRLEN(REPLACE(?targetMotifMatchCigarO59205MF_0122242, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step152), '}'), '')))), '[^-]', ''))) AS ?step253) . BIND(((?step253 + ?targetMotifMatchRegionMatchBeginPositionMF_0122243) - 1) AS ?thisPositionOn15) . BIND(?thisPositionOn15 AS ?thisPositionOn16) . BIND(?this AS ?pfs1t54) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01222a11')) AS ?annotation11) . BIND(?this AS ?pfs10) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch59 faldo:location ?templateMotifSequenceMatchRegionO5920560 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO5920562 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarO59205MF_0122255 . ?templateMotifSequenceMatchRegionO5920560 faldo:begin ?templateMotifSequenceMatchBeginO5920561 . ?templateMotifSequenceMatchBeginO5920561 faldo:position ?templateMotifSequenceMatchBeginPositionO5920556 ; faldo:reference isoform:O59205-1 . ?templateMotifSequenceProfileAlignmentOperationO5920562 edam:has_input signature:MF_01222 ; rdf:type edam:operation_0300 . ?targetMotifMatch63 faldo:location ?targetMotifMatchRegionMatch64 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0122266 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarO59205MF_0122257 . ?targetMotifMatchRegionMatch64 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0122265 . ?targetMotifMatchRegionMatchBeginMF_0122265 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0122258 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0122266 edam:has_input signature:MF_01222 ; rdf:type edam:operation_0300 . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn22) . BIND(?thisPositionOn22 AS ?thisPositionOn23) . BIND(?this AS ?pfs1t67) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) . FILTER (REGEX('[ILVT]', SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01222a18')) AS ?annotation18) . BIND(?this AS ?pfs17) . } } "xsd:string |