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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_01233#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01233#construct-template-40 |
| http://purl.uniprot.org/unirules/MF_01233#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01233#construct-template-45 |
| http://purl.uniprot.org/unirules/MF_01233#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01233#construct-template-42 |
| http://purl.uniprot.org/unirules/MF_01233#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01233#construct-template-20 |
| http://purl.uniprot.org/unirules/MF_01233#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01233#construct-template-49 |
| http://purl.uniprot.org/unirules/MF_01233#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01233#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01233#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01233#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01233#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01233#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:434866 up:source unirule:MF_01233 . _:434867 up:source unirule:MF_01233 . _:434868 up:source unirule:MF_01233 . _:434869 up:source unirule:MF_01233 . _:434870 up:source unirule:MF_01233 . _:434871 up:source unirule:MF_01233 . _:434872 up:source unirule:MF_01233 . _:434873 up:source unirule:MF_01233 . _:434874 up:source unirule:MF_01233 . _:434875 up:source unirule:MF_01233 . _:434876 up:source unirule:MF_01233 . _:434877 up:source unirule:MF_01233 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation4 ; up:classifiedWith GO:0003700 , GO:0045892 , keyword:238 , keyword:678 , keyword:804 , keyword:805 ; up:recommendedName ?name0 . ?name0 up:fullName 'HTH-type transcriptional regulator HdfR' ; rdf:type up:Structured_Name . ?name1 up:fullName 'H-NS-dependent flhDC regulator' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'hdfR' . ?annotation3 a up:Function_Annotation ; rdfs:comment 'Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon.' . ?annotation4 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the LysR transcriptional regulatory family.' . ?pfs5 up:annotation ?annotation6 . ?annotation6 faldo:begin ?pfsb7 ; faldo:end ?pfse8 ; rdf:type up:Nucleotide_Binding_Annotation ; rdfs:comment 'H-T-H motif' . ?pfsb7 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . ?pfse8 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . _:434878 a rdf:Statement ; up:attribution _:434866 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:434879 a rdf:Statement ; up:attribution _:434867 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:434880 a rdf:Statement ; up:attribution _:434868 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:434881 a rdf:Statement ; up:attribution _:434869 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:434882 a rdf:Statement ; up:attribution _:434870 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:434883 a rdf:Statement ; up:attribution _:434871 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:804 . _:434884 a rdf:Statement ; up:attribution _:434872 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:805 . _:434885 a rdf:Statement ; up:attribution _:434873 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:678 . _:434886 a rdf:Statement ; up:attribution _:434874 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:238 . _:434887 a rdf:Statement ; up:attribution _:434875 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003700 . _:434888 a rdf:Statement ; up:attribution _:434876 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0045892 . _:434889 a rdf:Statement ; up:source unirule:MF_01233 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:434890 a rdf:Statement ; up:attribution _:434877 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01233 #Rule MF_01233 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2022-06-29 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01233 . ?thisOrganism rdfs:subClassOf+ taxon:91347 . BIND(URI(CONCAT(STR(?this), '#MF_01233a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01233a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_01233a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01233a4')) AS ?annotation4) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch15 faldo:location ?templateMotifSequenceMatchRegionP0A8R916 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A8R918 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A8R9MF_0123311 . ?templateMotifSequenceMatchRegionP0A8R916 faldo:begin ?templateMotifSequenceMatchBeginP0A8R917 . ?templateMotifSequenceMatchBeginP0A8R917 faldo:position ?templateMotifSequenceMatchBeginPositionP0A8R912 ; faldo:reference isoform:P0A8R9-1 . ?templateMotifSequenceProfileAlignmentOperationP0A8R918 edam:has_input signature:MF_01233 ; rdf:type edam:operation_0300 . ?targetMotifMatch19 faldo:location ?targetMotifMatchRegionMatch20 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0123322 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A8R9MF_0123313 . ?targetMotifMatchRegionMatch20 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0123321 . ?targetMotifMatchRegionMatchBeginMF_0123321 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0123314 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0123322 edam:has_input signature:MF_01233 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A8R9MF_0123311, 1, (STRLEN(?templateMotifCigarP0A8R9MF_0123311) - STRLEN(REPLACE(?templateMotifCigarP0A8R9MF_0123311, CONCAT('^(?:-*[^-]){', STR(((18 - ?templateMotifSequenceMatchBeginPositionP0A8R912) + 1)), '}'), '')))), '[a-z]', '')) AS ?step123) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A8R9MF_0123313, 1, (STRLEN(?targetMotifMatchCigarP0A8R9MF_0123313) - STRLEN(REPLACE(?targetMotifMatchCigarP0A8R9MF_0123313, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step123), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A8R9MF_0123313, 1, (STRLEN(?targetMotifMatchCigarP0A8R9MF_0123313) - STRLEN(REPLACE(?targetMotifMatchCigarP0A8R9MF_0123313, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step123), '}'), '')))), '[^-]', ''))) AS ?step224) . BIND(((?step224 + ?targetMotifMatchRegionMatchBeginPositionMF_0123314) - 1) AS ?thisPositionOn9) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A8R9MF_0123311, 1, (STRLEN(?templateMotifCigarP0A8R9MF_0123311) - STRLEN(REPLACE(?templateMotifCigarP0A8R9MF_0123311, CONCAT('^(?:-*[^-]){', STR(((37 - ?templateMotifSequenceMatchBeginPositionP0A8R912) + 1)), '}'), '')))), '[a-z]', '')) AS ?step125) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A8R9MF_0123313, 1, (STRLEN(?targetMotifMatchCigarP0A8R9MF_0123313) - STRLEN(REPLACE(?targetMotifMatchCigarP0A8R9MF_0123313, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A8R9MF_0123313, 1, (STRLEN(?targetMotifMatchCigarP0A8R9MF_0123313) - STRLEN(REPLACE(?targetMotifMatchCigarP0A8R9MF_0123313, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step125), '}'), '')))), '[^-]', ''))) AS ?step226) . BIND(((?step226 + ?targetMotifMatchRegionMatchBeginPositionMF_0123314) - 1) AS ?thisPositionOn10) . BIND(?this AS ?pfs1t27) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfsb7) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfse8) . FILTER ((BOUND(?thisPositionOn9) && BOUND(?thisPositionOn10))) . BIND(URI(CONCAT(STR(?this), '#MF_01233a6')) AS ?annotation6) . BIND(?this AS ?pfs5) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_01233 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01233#construct |