Home | Contact

Results

RDF/XMLNTriplesTurtleShow queryShare ◀
SubjectPredicateObject
http://purl.uniprot.org/unirules/MF_01333#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_01333#construct-where-list-0
http://purl.uniprot.org/unirules/MF_01333#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_01333#construct-template-list-0
http://purl.uniprot.org/unirules/MF_01333#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:478290 up:source unirule:MF_01333 . _:478291 up:source unirule:MF_01333 . _:478292 up:source unirule:MF_01333 . _:478293 up:source unirule:MF_01333 . _:478294 up:source unirule:MF_01333 . _:478295 up:source unirule:MF_01333 . _:478296 up:source unirule:MF_01333 . _:478297 up:source unirule:MF_01333 . _:478298 up:source unirule:MF_01333 . _:478299 up:source unirule:MF_01333 . _:478300 up:source unirule:MF_01333 . _:478301 up:source unirule:MF_01333 . ?this up:annotation ?annotation0 ; up:classifiedWith GO:0006412 , GO:0019843 , keyword:687 , keyword:689 , keyword:694 , keyword:699 . ?annotation0 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the universal ribosomal protein uL5 family.' . ?case1 up:classifiedWith keyword:7 . ?case2 up:classifiedWith GO:0009507 . ?case3 up:classifiedWith GO:0000049 , keyword:820 . ?pfs9 up:annotation ?annotation10 . ?annotation10 faldo:begin ?pfsb11 ; faldo:end ?pfse12 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment 'N6-acetyllysine' . ?pfsb11 faldo:position ?thisPositionOn13 ; rdf:type faldo:ExactPosition . ?pfse12 faldo:position ?thisPositionOn14 ; rdf:type faldo:ExactPosition . _:478302 a rdf:Statement ; up:attribution _:478290 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:478303 a rdf:Statement ; up:attribution _:478291 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:687 . _:478304 a rdf:Statement ; up:attribution _:478292 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:689 . _:478305 a rdf:Statement ; up:attribution _:478293 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:694 . _:478306 a rdf:Statement ; up:attribution _:478294 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:699 . _:478307 a rdf:Statement ; up:attribution _:478295 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0019843 . _:478308 a rdf:Statement ; up:attribution _:478296 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006412 . _:478309 a rdf:Statement ; up:attribution _:478297 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:7 . _:478310 a rdf:Statement ; up:attribution _:478298 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object GO:0009507 . _:478311 a rdf:Statement ; up:attribution _:478299 ; rdf:subject ?case3 ; rdf:predicate up:classifiedWith ; rdf:object keyword:820 . _:478312 a rdf:Statement ; up:attribution _:478300 ; rdf:subject ?case3 ; rdf:predicate up:classifiedWith ; rdf:object GO:0000049 . _:478313 a rdf:Statement ; up:source unirule:MF_01333 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:478314 a rdf:Statement ; up:attribution _:478301 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01333 #Rule MF_01333 Created by:? on:2005-02-28 Modified by:Andrea Auchincloss on:2023-09-22 { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01333_B . ?thisOrganism rdfs:subClassOf+ taxon:2 . } UNION { ?this rdfs:seeAlso signature:MF_01333_B . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } } UNION { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01333_A . ?thisOrganism rdfs:subClassOf+ taxon:2157 . } BIND(URI(CONCAT(STR(?this), '#MF_01333a0')) AS ?annotation0) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch20 faldo:location ?templateMotifSequenceMatchRegionP6239921 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP6239923 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP62399MF_01333_B16 . ?templateMotifSequenceMatchRegionP6239921 faldo:begin ?templateMotifSequenceMatchBeginP6239922 . ?templateMotifSequenceMatchBeginP6239922 faldo:position ?templateMotifSequenceMatchBeginPositionP6239917 ; faldo:reference isoform:P62399-1 . ?templateMotifSequenceProfileAlignmentOperationP6239923 edam:has_input signature:MF_01333_B ; rdf:type edam:operation_0300 . ?targetMotifMatch24 faldo:location ?targetMotifMatchRegionMatch25 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01333_B27 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP62399MF_01333_B18 . ?targetMotifMatchRegionMatch25 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01333_B26 . ?targetMotifMatchRegionMatchBeginMF_01333_B26 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01333_B19 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01333_B27 edam:has_input signature:MF_01333_B ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFT_1) . VALUES ?supertaxon15 {taxon:561 taxon:620} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon15 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP62399MF_01333_B16, 1, (STRLEN(?templateMotifCigarP62399MF_01333_B16) - STRLEN(REPLACE(?templateMotifCigarP62399MF_01333_B16, CONCAT('^(?:-*[^-]){', STR(((3 - ?templateMotifSequenceMatchBeginPositionP6239917) + 1)), '}'), '')))), '[a-z]', '')) AS ?step128) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP62399MF_01333_B18, 1, (STRLEN(?targetMotifMatchCigarP62399MF_01333_B18) - STRLEN(REPLACE(?targetMotifMatchCigarP62399MF_01333_B18, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step128), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP62399MF_01333_B18, 1, (STRLEN(?targetMotifMatchCigarP62399MF_01333_B18) - STRLEN(REPLACE(?targetMotifMatchCigarP62399MF_01333_B18, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step128), '}'), '')))), '[^-]', ''))) AS ?step229) . BIND(((?step229 + ?targetMotifMatchRegionMatchBeginPositionMF_01333_B19) - 1) AS ?thisPositionOn13) . BIND(?thisPositionOn13 AS ?thisPositionOn14) . BIND(?this AS ?pfs1t30) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb11) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse12) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn13, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01333a10')) AS ?annotation10) . BIND(?this AS ?pfs9) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag31) . } BIND(IF(BOUND(?tagFT_1), ?caseWithTag31, ?UNBOUND_VARIABLE) AS ?case1) . OPTIONAL { ?this a up:Protein . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } BIND(?this AS ?case2) . } OPTIONAL { ?this a up:Protein . FILTER (! (EXISTS { { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } })) . BIND(?this AS ?case3) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(?this AS ?case4) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1117 . BIND(?this AS ?case6) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1117 . })) . BIND(?this AS ?case7) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } FILTER (! (EXISTS { VALUES ?supertaxon32 {taxon:2157 taxon:2} ?thisOrganism rdfs:subClassOf+ ?supertaxon32 . })) . BIND(?this AS ?case8) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_01333http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_01333#construct
◀