| http://purl.uniprot.org/unirules/MF_01401#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01401#construct-template-18 |
| http://purl.uniprot.org/unirules/MF_01401#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01401#construct-template-19 |
| http://purl.uniprot.org/unirules/MF_01401#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01401#construct-template-10 |
| http://purl.uniprot.org/unirules/MF_01401#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01401#construct-template-26 |
| http://purl.uniprot.org/unirules/MF_01401#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01401#construct-template-6 |
| http://purl.uniprot.org/unirules/MF_01401#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01401#construct-template-32 |
| http://purl.uniprot.org/unirules/MF_01401#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01401#construct-template-56 |
| http://purl.uniprot.org/unirules/MF_01401#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01401#construct-template-30 |
| http://purl.uniprot.org/unirules/MF_01401#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01401#construct-template-58 |
| http://purl.uniprot.org/unirules/MF_01401#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01401#construct-template-51 |
| http://purl.uniprot.org/unirules/MF_01401#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01401#construct-template-52 |
| http://purl.uniprot.org/unirules/MF_01401#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01401#construct-template-54 |
| http://purl.uniprot.org/unirules/MF_01401#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01401#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01401#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01401#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01401#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01401#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:507297 up:source unirule:MF_01401 .
_:507298 up:source unirule:MF_01401 .
_:507299 up:source unirule:MF_01401 .
_:507300 up:source unirule:MF_01401 .
_:507301 up:source unirule:MF_01401 .
_:507302 up:source unirule:MF_01401 .
_:507303 up:source unirule:MF_01401 .
_:507304 up:source unirule:MF_01401 .
_:507305 up:source unirule:MF_01401 .
_:507306 up:source unirule:MF_01401 .
_:507307 up:source unirule:MF_01401 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation8 ;
up:classifiedWith GO:0008113 ,
GO:0036211 ,
keyword:560 ;
up:recommendedName ?name0 .
?name0 up:ecName '1.8.4.11' ;
up:fullName 'Peptide methionine sulfoxide reductase MsrA' ;
up:shortName 'Protein-methionine-S-oxide reductase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Peptide-methionine (S)-S-oxide reductase' ;
up:shortName 'Peptide Met(O) reductase' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'msrA' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 up:activity ?activity7 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity7 up:catalyticActivity ;
up:enzymeClass .
?annotation8 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the MsrA Met sulfoxide reductase family.' .
?pfs9 up:annotation ?annotation10 .
?annotation10 faldo:begin ?pfsb11 ;
faldo:end ?pfse12 ;
rdf:type up:Active_Site_Annotation .
?pfsb11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?pfse12 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
_:507308 a rdf:Statement ;
up:attribution _:507297 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:507309 a rdf:Statement ;
up:attribution _:507298 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:507310 a rdf:Statement ;
up:attribution _:507299 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:507311 a rdf:Statement ;
up:attribution _:507300 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:507312 a rdf:Statement ;
up:attribution _:507301 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:507313 a rdf:Statement ;
up:attribution _:507302 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:507314 a rdf:Statement ;
up:attribution _:507303 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:507315 a rdf:Statement ;
up:attribution _:507304 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:560 .
_:507316 a rdf:Statement ;
up:attribution _:507305 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008113 .
_:507317 a rdf:Statement ;
up:attribution _:507306 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0036211 .
_:507318 a rdf:Statement ;
up:source unirule:MF_01401 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:507319 a rdf:Statement ;
up:attribution _:507307 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01401
#Rule MF_01401 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-02
VALUES ?supertaxon15 {taxon:2 taxon:2157}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01401 .
?thisOrganism rdfs:subClassOf+ ?supertaxon15 .
BIND(URI(CONCAT(STR(?this), '#MF_01401a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01401a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01401a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01401a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01401a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01401a8')) AS ?annotation8) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch20 faldo:location ?templateMotifSequenceMatchRegionP0A74421 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A74423 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A744MF_0140116 .
?templateMotifSequenceMatchRegionP0A74421 faldo:begin ?templateMotifSequenceMatchBeginP0A74422 .
?templateMotifSequenceMatchBeginP0A74422 faldo:position ?templateMotifSequenceMatchBeginPositionP0A74417 ;
faldo:reference isoform:P0A744-1 .
?templateMotifSequenceProfileAlignmentOperationP0A74423 edam:has_input signature:MF_01401 ;
rdf:type edam:operation_0300 .
?targetMotifMatch24 faldo:location ?targetMotifMatchRegionMatch25 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0140127 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A744MF_0140118 .
?targetMotifMatchRegionMatch25 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0140126 .
?targetMotifMatchRegionMatchBeginMF_0140126 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0140119 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0140127 edam:has_input signature:MF_01401 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A744MF_0140116, 1, (STRLEN(?templateMotifCigarP0A744MF_0140116) - STRLEN(REPLACE(?templateMotifCigarP0A744MF_0140116, CONCAT('^(?:-*[^-]){', STR(((52 - ?templateMotifSequenceMatchBeginPositionP0A74417) + 1)), '}'), '')))), '[a-z]', '')) AS ?step128) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A744MF_0140118, 1, (STRLEN(?targetMotifMatchCigarP0A744MF_0140118) - STRLEN(REPLACE(?targetMotifMatchCigarP0A744MF_0140118, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step128), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A744MF_0140118, 1, (STRLEN(?targetMotifMatchCigarP0A744MF_0140118) - STRLEN(REPLACE(?targetMotifMatchCigarP0A744MF_0140118, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step128), '}'), '')))), '[^-]', ''))) AS ?step229) .
BIND(((?step229 + ?targetMotifMatchRegionMatchBeginPositionMF_0140119) - 1) AS ?thisPositionOn13) .
BIND(?thisPositionOn13 AS ?thisPositionOn14) .
BIND(?this AS ?pfs1t30) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb11) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse12) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn13, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_01401a10')) AS ?annotation10) .
BIND(?this AS ?pfs9) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_01401 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01401#construct |
