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http://purl.uniprot.org/unirules/MF_01449#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_01449#construct-template-list-0
http://purl.uniprot.org/unirules/MF_01449#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:524881 up:source unirule:MF_01449 . _:524882 up:source unirule:MF_01449 . _:524883 up:source unirule:MF_01449 . _:524884 up:source unirule:MF_01449 . _:524885 up:source unirule:MF_01449 . _:524886 up:source unirule:MF_01449 . _:524887 up:source unirule:MF_01449 . _:524888 up:source unirule:MF_01449 . _:524889 up:source unirule:MF_01449 . _:524890 up:source unirule:MF_01449 . _:524891 up:source unirule:MF_01449 . ?this up:annotation ?annotation2 ; up:classifiedWith GO:0045892 , GO:0045893 , keyword:10 , keyword:238 , keyword:678 , keyword:804 , keyword:805 ; up:recommendedName ?name0 . ?name0 up:fullName 'HTH-type transcriptional regulator SgrR' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'sgrR' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Activates the small RNA gene sgrS under glucose-phosphate stress conditions as well as yfdZ. Represses its own transcription under both stress and non-stress conditions. Might act as a sensor of the intracellular accumulation of phosphoglucose by binding these molecules in its C-terminal solute-binding domain.' . ?pfs3 up:annotation ?annotation4 . ?annotation4 faldo:begin ?pfsb5 ; faldo:end ?pfse6 ; rdf:type up:Region_Annotation ; rdfs:comment 'Solute-binding' . ?pfsb5 faldo:position ?thisPositionOn7 ; rdf:type faldo:ExactPosition . ?pfse6 faldo:position ?thisPositionOn8 ; rdf:type faldo:ExactPosition . _:524892 a rdf:Statement ; up:attribution _:524881 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:524893 a rdf:Statement ; up:attribution _:524882 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:524894 a rdf:Statement ; up:attribution _:524883 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:524895 a rdf:Statement ; up:attribution _:524884 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:10 . _:524896 a rdf:Statement ; up:attribution _:524885 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:238 . _:524897 a rdf:Statement ; up:attribution _:524886 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:678 . _:524898 a rdf:Statement ; up:attribution _:524887 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:804 . _:524899 a rdf:Statement ; up:attribution _:524888 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:805 . _:524900 a rdf:Statement ; up:attribution _:524889 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0045892 . _:524901 a rdf:Statement ; up:attribution _:524890 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0045893 . _:524902 a rdf:Statement ; up:source unirule:MF_01449 ; rdf:subject ?pfs3 ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:524903 a rdf:Statement ; up:attribution _:524891 ; rdf:subject ?pfs3 ; rdf:predicate up:annotation ; rdf:object ?annotation4 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01449 #Rule MF_01449 Created by:? on:2007-10-04 Modified by:Catherine Rivoire on:2022-06-27 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01449 . ?thisOrganism rdfs:subClassOf+ taxon:91347 . BIND(URI(CONCAT(STR(?this), '#MF_01449a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01449a2')) AS ?annotation2) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch13 faldo:location ?templateMotifSequenceMatchRegionP3359514 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3359516 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33595MF_014499 . ?templateMotifSequenceMatchRegionP3359514 faldo:begin ?templateMotifSequenceMatchBeginP3359515 . ?templateMotifSequenceMatchBeginP3359515 faldo:position ?templateMotifSequenceMatchBeginPositionP3359510 ; faldo:reference isoform:P33595-1 . ?templateMotifSequenceProfileAlignmentOperationP3359516 edam:has_input signature:MF_01449 ; rdf:type edam:operation_0300 . ?targetMotifMatch17 faldo:location ?targetMotifMatchRegionMatch18 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0144920 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33595MF_0144911 . ?targetMotifMatchRegionMatch18 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0144919 . ?targetMotifMatchRegionMatchBeginMF_0144919 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0144912 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0144920 edam:has_input signature:MF_01449 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33595MF_014499, 1, (STRLEN(?templateMotifCigarP33595MF_014499) - STRLEN(REPLACE(?templateMotifCigarP33595MF_014499, CONCAT('^(?:-*[^-]){', STR(((163 - ?templateMotifSequenceMatchBeginPositionP3359510) + 1)), '}'), '')))), '[a-z]', '')) AS ?step121) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33595MF_0144911, 1, (STRLEN(?targetMotifMatchCigarP33595MF_0144911) - STRLEN(REPLACE(?targetMotifMatchCigarP33595MF_0144911, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step121), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33595MF_0144911, 1, (STRLEN(?targetMotifMatchCigarP33595MF_0144911) - STRLEN(REPLACE(?targetMotifMatchCigarP33595MF_0144911, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step121), '}'), '')))), '[^-]', ''))) AS ?step222) . BIND(((?step222 + ?targetMotifMatchRegionMatchBeginPositionMF_0144912) - 1) AS ?thisPositionOn7) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33595MF_014499, 1, (STRLEN(?templateMotifCigarP33595MF_014499) - STRLEN(REPLACE(?templateMotifCigarP33595MF_014499, CONCAT('^(?:-*[^-]){', STR(((492 - ?templateMotifSequenceMatchBeginPositionP3359510) + 1)), '}'), '')))), '[a-z]', '')) AS ?step123) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33595MF_0144911, 1, (STRLEN(?targetMotifMatchCigarP33595MF_0144911) - STRLEN(REPLACE(?targetMotifMatchCigarP33595MF_0144911, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step123), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33595MF_0144911, 1, (STRLEN(?targetMotifMatchCigarP33595MF_0144911) - STRLEN(REPLACE(?targetMotifMatchCigarP33595MF_0144911, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step123), '}'), '')))), '[^-]', ''))) AS ?step224) . BIND(((?step224 + ?targetMotifMatchRegionMatchBeginPositionMF_0144912) - 1) AS ?thisPositionOn8) . BIND(?this AS ?pfs1t25) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn7))) AS ?pfsb5) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn8))) AS ?pfse6) . FILTER ((BOUND(?thisPositionOn7) && BOUND(?thisPositionOn8))) . BIND(URI(CONCAT(STR(?this), '#MF_01449a4')) AS ?annotation4) . BIND(?this AS ?pfs3) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_01449http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_01449#construct
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