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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-22 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-24 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-29 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-28 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-27 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-26 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-49 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-25 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-48 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-47 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-46 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-45 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-44 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-43 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-66 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-42 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-40 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-65 |
| http://purl.uniprot.org/unirules/MF_01471#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01471#construct-template-41 |
| http://purl.uniprot.org/unirules/MF_01471#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01471#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01471#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01471#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01471#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01471#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:533394 up:source unirule:MF_01471 . _:533395 up:source unirule:MF_01471 . _:533396 up:source unirule:MF_01471 . _:533397 up:source unirule:MF_01471 . _:533398 up:source unirule:MF_01471 . _:533399 up:source unirule:MF_01471 . _:533400 up:source unirule:MF_01471 . _:533401 up:source unirule:MF_01471 . _:533402 up:source unirule:MF_01471 . _:533403 up:source unirule:MF_01471 . _:533404 up:source unirule:MF_01471 . _:533405 up:source unirule:MF_01471 . _:533406 up:source unirule:MF_01471 . _:533407 up:source unirule:MF_01471 . _:533408 up:source unirule:MF_01471 . _:533409 up:source unirule:MF_01471 . ?this up:annotation ?annotation2 , ?annotation3 , ?annotation4 ; up:classifiedWith GO:0004519 , GO:0043571 , GO:0051607 , keyword:255 , keyword:378 , keyword:51 , keyword:540 ; up:recommendedName ?name0 . ?name0 up:ecName '3.1.-.-' ; up:fullName 'CRISPR-associated endoribonuclease Cas2' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'cas2' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.' . ?annotation3 a up:Subunit_Annotation ; rdfs:comment 'Homodimer, forms a heterotetramer with a Cas1 homodimer.' . ?annotation4 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the CRISPR-associated endoribonuclease Cas2 protein family.' . ?case5 up:classifiedWith GO:0046872 , keyword:460 , keyword:479 . ?pfs6 up:annotation ?annotation7 . ?annotation7 faldo:begin ?pfsb8 ; faldo:end ?pfse9 ; up:ligand ?ligand10 ; rdf:type up:Binding_Site_Annotation . ?pfsb8 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?pfse9 faldo:position ?thisPositionOn12 ; rdf:type faldo:ExactPosition . ?ligand10 rdfs:subClassOf chebi:18420 . _:533410 a rdf:Statement ; up:attribution _:533394 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:533411 a rdf:Statement ; up:attribution _:533395 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:533412 a rdf:Statement ; up:attribution _:533396 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:533413 a rdf:Statement ; up:attribution _:533397 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:533414 a rdf:Statement ; up:attribution _:533398 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:533415 a rdf:Statement ; up:attribution _:533399 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:51 . _:533416 a rdf:Statement ; up:attribution _:533400 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:255 . _:533417 a rdf:Statement ; up:attribution _:533401 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:533418 a rdf:Statement ; up:attribution _:533402 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:540 . _:533419 a rdf:Statement ; up:attribution _:533403 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004519 . _:533420 a rdf:Statement ; up:attribution _:533404 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0051607 . _:533421 a rdf:Statement ; up:attribution _:533405 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0043571 . _:533422 a rdf:Statement ; up:attribution _:533406 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:533423 a rdf:Statement ; up:attribution _:533407 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:533424 a rdf:Statement ; up:attribution _:533408 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object GO:0046872 . _:533425 a rdf:Statement ; up:source unirule:MF_01471 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:533426 a rdf:Statement ; up:attribution _:533409 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01471 #Rule MF_01471 Created by:? on:2012-04-26 Modified by:Edouard de Castro on:2023-06-01 VALUES ?supertaxon13 {taxon:2 taxon:2157} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01471 . ?thisOrganism rdfs:subClassOf+ ?supertaxon13 . BIND(URI(CONCAT(STR(?this), '#MF_01471a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01471a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_01471a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01471a4')) AS ?annotation4) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch18 faldo:location ?templateMotifSequenceMatchRegionQ97YC219 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ97YC221 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ97YC2MF_0147114 . ?templateMotifSequenceMatchRegionQ97YC219 faldo:begin ?templateMotifSequenceMatchBeginQ97YC220 . ?templateMotifSequenceMatchBeginQ97YC220 faldo:position ?templateMotifSequenceMatchBeginPositionQ97YC215 ; faldo:reference isoform:Q97YC2-1 . ?templateMotifSequenceProfileAlignmentOperationQ97YC221 edam:has_input signature:MF_01471 ; rdf:type edam:operation_0300 . ?targetMotifMatch22 faldo:location ?targetMotifMatchRegionMatch23 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0147125 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ97YC2MF_0147116 . ?targetMotifMatchRegionMatch23 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0147124 . ?targetMotifMatchRegionMatchBeginMF_0147124 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0147117 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0147125 edam:has_input signature:MF_01471 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFT_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ97YC2MF_0147114, 1, (STRLEN(?templateMotifCigarQ97YC2MF_0147114) - STRLEN(REPLACE(?templateMotifCigarQ97YC2MF_0147114, CONCAT('^(?:-*[^-]){', STR(((10 - ?templateMotifSequenceMatchBeginPositionQ97YC215) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ97YC2MF_0147116, 1, (STRLEN(?targetMotifMatchCigarQ97YC2MF_0147116) - STRLEN(REPLACE(?targetMotifMatchCigarQ97YC2MF_0147116, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ97YC2MF_0147116, 1, (STRLEN(?targetMotifMatchCigarQ97YC2MF_0147116) - STRLEN(REPLACE(?targetMotifMatchCigarQ97YC2MF_0147116, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) . BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0147117) - 1) AS ?thisPositionOn11) . BIND(?thisPositionOn11 AS ?thisPositionOn12) . BIND(?this AS ?pfs1t28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfsb8) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfse9) . FILTER (REGEX('[DE]', SUBSTR(?thisSequenceValue, ?thisPositionOn11, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01471a7')) AS ?annotation7) . BIND(?this AS ?pfs6) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag29) . } BIND(IF(BOUND(?tagFT_1), ?caseWithTag29, ?UNBOUND_VARIABLE) AS ?case5) . } "xsd:string |
| http://purl.uniprot.org/unirules/MF_01471 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01471#construct |