| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-34 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-23 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-7 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-27 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-9 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-46 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-29 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-19 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-24 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-5 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-3 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-44 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-42 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-62 |
| http://purl.uniprot.org/unirules/MF_01513#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01513#construct-template-60 |
| http://purl.uniprot.org/unirules/MF_01513#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01513#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01513#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01513#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01513#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01513#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:547965 up:source unirule:MF_01513 .
_:547966 up:source unirule:MF_01513 .
_:547967 up:source unirule:MF_01513 .
_:547968 up:source unirule:MF_01513 .
_:547969 up:source unirule:MF_01513 .
_:547970 up:source unirule:MF_01513 .
_:547971 up:source unirule:MF_01513 .
_:547972 up:source unirule:MF_01513 .
_:547973 up:source unirule:MF_01513 .
_:547974 up:source unirule:MF_01513 .
_:547975 up:source unirule:MF_01513 .
_:547976 up:source unirule:MF_01513 .
_:547977 up:source unirule:MF_01513 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ,
?annotation6 ,
?annotation7 ;
up:classifiedWith GO:0008793 ,
GO:0030170 ,
keyword:32 ,
keyword:663 ,
keyword:808 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.6.1.57' ;
up:fullName 'Aromatic amino acid aminotransferase' ;
up:shortName 'ArAT' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'pat' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Aminotransferase that catalyzes the conversion of aromatic amino acids and 2-oxoglutarate into corresponding aromatic oxo acids and L-glutamate.' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 up:cofactor chebi:597326 ;
rdf:type up:Cofactor_Annotation .
?annotation6 a up:Subunit_Annotation ;
rdfs:comment 'Homodimer.' .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.' .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
rdf:type up:Modified_Residue_Annotation ;
rdfs:comment 'N6-(pyridoxal phosphate)lysine' .
?pfsb10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
_:547978 a rdf:Statement ;
up:attribution _:547965 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:547979 a rdf:Statement ;
up:attribution _:547966 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:547980 a rdf:Statement ;
up:attribution _:547967 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:547981 a rdf:Statement ;
up:attribution _:547968 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:547982 a rdf:Statement ;
up:attribution _:547969 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:547983 a rdf:Statement ;
up:attribution _:547970 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:547984 a rdf:Statement ;
up:attribution _:547971 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:547985 a rdf:Statement ;
up:attribution _:547972 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:32 .
_:547986 a rdf:Statement ;
up:attribution _:547973 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:663 .
_:547987 a rdf:Statement ;
up:attribution _:547974 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:547988 a rdf:Statement ;
up:attribution _:547975 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008793 .
_:547989 a rdf:Statement ;
up:attribution _:547976 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0030170 .
_:547990 a rdf:Statement ;
up:source unirule:MF_01513 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:547991 a rdf:Statement ;
up:attribution _:547977 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01513
#Rule MF_01513 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01513 .
?thisOrganism rdfs:subClassOf+ taxon:201174 .
BIND(URI(CONCAT(STR(?this), '#MF_01513a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01513a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_01513a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01513a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_01513a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01513a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch18 faldo:location ?templateMotifSequenceMatchRegionP9WML519 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WML521 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP9WML5MF_0151314 .
?templateMotifSequenceMatchRegionP9WML519 faldo:begin ?templateMotifSequenceMatchBeginP9WML520 .
?templateMotifSequenceMatchBeginP9WML520 faldo:position ?templateMotifSequenceMatchBeginPositionP9WML515 ;
faldo:reference isoform:P9WML5-1 .
?templateMotifSequenceProfileAlignmentOperationP9WML521 edam:has_input signature:MF_01513 ;
rdf:type edam:operation_0300 .
?targetMotifMatch22 faldo:location ?targetMotifMatchRegionMatch23 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0151325 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP9WML5MF_0151316 .
?targetMotifMatchRegionMatch23 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0151324 .
?targetMotifMatchRegionMatchBeginMF_0151324 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0151317 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0151325 edam:has_input signature:MF_01513 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WML5MF_0151314, 1, (STRLEN(?templateMotifCigarP9WML5MF_0151314) - STRLEN(REPLACE(?templateMotifCigarP9WML5MF_0151314, CONCAT('^(?:-*[^-]){', STR(((217 - ?templateMotifSequenceMatchBeginPositionP9WML515) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WML5MF_0151316, 1, (STRLEN(?targetMotifMatchCigarP9WML5MF_0151316) - STRLEN(REPLACE(?targetMotifMatchCigarP9WML5MF_0151316, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WML5MF_0151316, 1, (STRLEN(?targetMotifMatchCigarP9WML5MF_0151316) - STRLEN(REPLACE(?targetMotifMatchCigarP9WML5MF_0151316, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) .
BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0151317) - 1) AS ?thisPositionOn12) .
BIND(?thisPositionOn12 AS ?thisPositionOn13) .
BIND(?this AS ?pfs1t28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn12, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_01513a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_01513 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01513#construct |
