| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-20 |
| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-37 |
| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-33 |
| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-54 |
| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-41 |
| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-53 |
| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-52 |
| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-50 |
| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-38 |
| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-39 |
| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-57 |
| http://purl.uniprot.org/unirules/MF_01927#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01927#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_01927#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01927#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01927#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01927#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01927#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01927#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:673817 up:source unirule:MF_01927 .
_:673818 up:source unirule:MF_01927 .
_:673819 up:source unirule:MF_01927 .
_:673820 up:source unirule:MF_01927 .
_:673821 up:source unirule:MF_01927 .
_:673822 up:source unirule:MF_01927 .
_:673823 up:source unirule:MF_01927 .
_:673824 up:source unirule:MF_01927 .
_:673825 up:source unirule:MF_01927 .
_:673826 up:source unirule:MF_01927 .
_:673827 up:source unirule:MF_01927 .
_:673828 up:source unirule:MF_01927 .
_:673829 up:source unirule:MF_01927 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation7 ;
up:classifiedWith GO:0006189 ,
GO:0008864 ,
keyword:378 ,
keyword:554 ,
keyword:658 ;
up:recommendedName ?name0 .
?name0 up:ecName '3.5.1.10' ;
up:fullName 'Formyltetrahydrofolate deformylase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Formyl-FH(4) hydrolase' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'purU' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 a up:Pathway_Annotation ;
rdfs:comment 'Purine metabolism; IMP biosynthesis via de novo pathway; formate from 10-formyl-5,6,7,8-tetrahydrofolate: step 1/1.' .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the PurU family.' .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
rdf:type up:Active_Site_Annotation .
?pfsb10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
_:673830 a rdf:Statement ;
up:attribution _:673817 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:673831 a rdf:Statement ;
up:attribution _:673818 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:673832 a rdf:Statement ;
up:attribution _:673819 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:673833 a rdf:Statement ;
up:attribution _:673820 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:673834 a rdf:Statement ;
up:attribution _:673821 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:673835 a rdf:Statement ;
up:attribution _:673822 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:673836 a rdf:Statement ;
up:attribution _:673823 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:673837 a rdf:Statement ;
up:attribution _:673824 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:378 .
_:673838 a rdf:Statement ;
up:attribution _:673825 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:554 .
_:673839 a rdf:Statement ;
up:attribution _:673826 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:658 .
_:673840 a rdf:Statement ;
up:attribution _:673827 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008864 .
_:673841 a rdf:Statement ;
up:attribution _:673828 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006189 .
_:673842 a rdf:Statement ;
up:source unirule:MF_01927 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:673843 a rdf:Statement ;
up:attribution _:673829 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01927
#Rule MF_01927 Created by:? on:2014-07-10 Modified by:Elisabeth Coudert on:2023-07-18
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01927 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_01927a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01927a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01927a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01927a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01927a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01927a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch18 faldo:location ?templateMotifSequenceMatchRegionP3705119 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3705121 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP37051MF_0192714 .
?templateMotifSequenceMatchRegionP3705119 faldo:begin ?templateMotifSequenceMatchBeginP3705120 .
?templateMotifSequenceMatchBeginP3705120 faldo:position ?templateMotifSequenceMatchBeginPositionP3705115 ;
faldo:reference isoform:P37051-1 .
?templateMotifSequenceProfileAlignmentOperationP3705121 edam:has_input signature:MF_01927 ;
rdf:type edam:operation_0300 .
?targetMotifMatch22 faldo:location ?targetMotifMatchRegionMatch23 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0192725 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP37051MF_0192716 .
?targetMotifMatchRegionMatch23 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0192724 .
?targetMotifMatchRegionMatchBeginMF_0192724 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0192717 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0192725 edam:has_input signature:MF_01927 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37051MF_0192714, 1, (STRLEN(?templateMotifCigarP37051MF_0192714) - STRLEN(REPLACE(?templateMotifCigarP37051MF_0192714, CONCAT('^(?:-*[^-]){', STR(((225 - ?templateMotifSequenceMatchBeginPositionP3705115) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37051MF_0192716, 1, (STRLEN(?targetMotifMatchCigarP37051MF_0192716) - STRLEN(REPLACE(?targetMotifMatchCigarP37051MF_0192716, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37051MF_0192716, 1, (STRLEN(?targetMotifMatchCigarP37051MF_0192716) - STRLEN(REPLACE(?targetMotifMatchCigarP37051MF_0192716, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) .
BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0192717) - 1) AS ?thisPositionOn12) .
BIND(?thisPositionOn12 AS ?thisPositionOn13) .
BIND(?this AS ?pfs1t28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn12, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_01927a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_01927 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01927#construct |
