| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-28 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-27 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-42 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-41 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-40 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-46 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-22 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-45 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-21 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-44 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-20 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-43 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-62 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_02015#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02015#construct-template-60 |
| http://purl.uniprot.org/unirules/MF_02015#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_02015#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_02015#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_02015#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_02015#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_02015#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:709103 up:source unirule:MF_02015 .
_:709104 up:source unirule:MF_02015 .
_:709105 up:source unirule:MF_02015 .
_:709106 up:source unirule:MF_02015 .
_:709107 up:source unirule:MF_02015 .
_:709108 up:source unirule:MF_02015 .
_:709109 up:source unirule:MF_02015 .
_:709110 up:source unirule:MF_02015 .
_:709111 up:source unirule:MF_02015 .
_:709112 up:source unirule:MF_02015 .
_:709113 up:source unirule:MF_02015 .
_:709114 up:source unirule:MF_02015 .
_:709115 up:source unirule:MF_02015 .
_:709116 up:source unirule:MF_02015 .
_:709117 up:source unirule:MF_02015 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ;
up:classifiedWith GO:0003677 ,
GO:0005737 ,
GO:0051301 ,
GO:0090529 ,
keyword:131 ,
keyword:132 ,
keyword:238 ,
keyword:717 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:fullName 'Nucleoid occlusion protein' ;
up:shortName 'Noc' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'noc' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage.' .
?annotation3 a up:Subcellular_Location_Annotation .
?annotation3li4 up:cellularComponent .
?annotation5 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the ParB family.' .
?pfs6 up:annotation ?annotation7 .
?annotation7 faldo:begin ?pfsb8 ;
faldo:end ?pfse9 ;
rdf:type up:Nucleotide_Binding_Annotation ;
rdfs:comment 'H-T-H motif' .
?pfsb8 faldo:position ?thisPositionOn10 ;
rdf:type faldo:ExactPosition .
?pfse9 faldo:position ?thisPositionOn11 ;
rdf:type faldo:ExactPosition .
_:709118 a rdf:Statement ;
up:attribution _:709103 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:709119 a rdf:Statement ;
up:attribution _:709104 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:709120 a rdf:Statement ;
up:attribution _:709105 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:709121 a rdf:Statement ;
up:attribution _:709106 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:709122 a rdf:Statement ;
up:attribution _:709107 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:709123 a rdf:Statement ;
up:attribution _:709108 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:131 .
_:709124 a rdf:Statement ;
up:attribution _:709109 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:132 .
_:709125 a rdf:Statement ;
up:attribution _:709110 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:709126 a rdf:Statement ;
up:attribution _:709111 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:238 .
_:709127 a rdf:Statement ;
up:attribution _:709112 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:717 .
_:709128 a rdf:Statement ;
up:attribution _:709113 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:709129 a rdf:Statement ;
up:attribution _:709114 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0003677 .
_:709130 a rdf:Statement ;
up:attribution _:709115 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0051301 .
_:709131 a rdf:Statement ;
up:attribution _:709116 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0090529 .
_:709132 a rdf:Statement ;
up:source unirule:MF_02015 ;
rdf:subject ?pfs6 ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:709133 a rdf:Statement ;
up:attribution _:709117 ;
rdf:subject ?pfs6 ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_02015
#Rule MF_02015 Created by:? on:2008-07-04 Modified by:Edouard de Castro on:2023-06-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_02015 .
?thisOrganism rdfs:subClassOf+ taxon:1385 .
BIND(URI(CONCAT(STR(?this), '#MF_02015a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_02015a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_02015a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_02015a5')) AS ?annotation5) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch16 faldo:location ?templateMotifSequenceMatchRegionP3752417 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3752419 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP37524MF_0201512 .
?templateMotifSequenceMatchRegionP3752417 faldo:begin ?templateMotifSequenceMatchBeginP3752418 .
?templateMotifSequenceMatchBeginP3752418 faldo:position ?templateMotifSequenceMatchBeginPositionP3752413 ;
faldo:reference isoform:P37524-1 .
?templateMotifSequenceProfileAlignmentOperationP3752419 edam:has_input signature:MF_02015 ;
rdf:type edam:operation_0300 .
?targetMotifMatch20 faldo:location ?targetMotifMatchRegionMatch21 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0201523 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP37524MF_0201514 .
?targetMotifMatchRegionMatch21 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0201522 .
?targetMotifMatchRegionMatchBeginMF_0201522 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0201515 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0201523 edam:has_input signature:MF_02015 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37524MF_0201512, 1, (STRLEN(?templateMotifCigarP37524MF_0201512) - STRLEN(REPLACE(?templateMotifCigarP37524MF_0201512, CONCAT('^(?:-*[^-]){', STR(((148 - ?templateMotifSequenceMatchBeginPositionP3752413) + 1)), '}'), '')))), '[a-z]', '')) AS ?step124) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37524MF_0201514, 1, (STRLEN(?targetMotifMatchCigarP37524MF_0201514) - STRLEN(REPLACE(?targetMotifMatchCigarP37524MF_0201514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step124), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37524MF_0201514, 1, (STRLEN(?targetMotifMatchCigarP37524MF_0201514) - STRLEN(REPLACE(?targetMotifMatchCigarP37524MF_0201514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step124), '}'), '')))), '[^-]', ''))) AS ?step225) .
BIND(((?step225 + ?targetMotifMatchRegionMatchBeginPositionMF_0201515) - 1) AS ?thisPositionOn10) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37524MF_0201512, 1, (STRLEN(?templateMotifCigarP37524MF_0201512) - STRLEN(REPLACE(?templateMotifCigarP37524MF_0201512, CONCAT('^(?:-*[^-]){', STR(((167 - ?templateMotifSequenceMatchBeginPositionP3752413) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37524MF_0201514, 1, (STRLEN(?targetMotifMatchCigarP37524MF_0201514) - STRLEN(REPLACE(?targetMotifMatchCigarP37524MF_0201514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37524MF_0201514, 1, (STRLEN(?targetMotifMatchCigarP37524MF_0201514) - STRLEN(REPLACE(?targetMotifMatchCigarP37524MF_0201514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) .
BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0201515) - 1) AS ?thisPositionOn11) .
BIND(?this AS ?pfs1t28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb8) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse9) .
FILTER ((BOUND(?thisPositionOn10) && BOUND(?thisPositionOn11))) .
BIND(URI(CONCAT(STR(?this), '#MF_02015a7')) AS ?annotation7) .
BIND(?this AS ?pfs6) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_02015 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_02015#construct |
