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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-46 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-23 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-38 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-48 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-7 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-10 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-40 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-29 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-52 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-12 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-64 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-42 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-65 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-66 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-57 |
| http://purl.uniprot.org/unirules/MF_02018#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02018#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_02018#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_02018#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_02018#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_02018#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_02018#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_02018#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:710152 up:source unirule:MF_02018 .
_:710153 up:source unirule:MF_02018 .
_:710154 up:source unirule:MF_02018 .
_:710155 up:source unirule:MF_02018 .
_:710156 up:source unirule:MF_02018 .
_:710157 up:source unirule:MF_02018 .
_:710158 up:source unirule:MF_02018 .
_:710159 up:source unirule:MF_02018 .
_:710160 up:source unirule:MF_02018 .
_:710161 up:source unirule:MF_02018 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation4 ;
up:classifiedWith GO:0015940 ,
keyword:566 ;
up:recommendedName ?name0 .
?name0 up:fullName 'PanD regulatory factor' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'panZ' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion.' .
?annotation3 a up:Subunit_Annotation ;
rdfs:comment 'Interacts with PanD in the presence of CoA.' .
?annotation4 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the PanZ/PanM family.' .
?pfs5 up:annotation ?annotation6 .
?annotation6 faldo:begin ?pfsb7 ;
faldo:end ?pfse8 ;
up:ligand ?ligand9 ;
rdf:type up:Binding_Site_Annotation .
?pfsb7 faldo:position ?thisPositionOn10 ;
rdf:type faldo:ExactPosition .
?pfse8 faldo:position ?thisPositionOn11 ;
rdf:type faldo:ExactPosition .
?ligand9 rdfs:subClassOf chebi:57287 .
?pfs12 up:annotation ?annotation13 .
?annotation13 faldo:begin ?pfsb14 ;
faldo:end ?pfse15 ;
up:ligand ?ligand16 ;
rdf:type up:Binding_Site_Annotation .
?pfsb14 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?pfse15 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?ligand16 rdfs:subClassOf chebi:57287 .
?pfs19 up:annotation ?annotation20 .
?annotation20 faldo:begin ?pfsb21 ;
faldo:end ?pfse22 ;
rdf:type up:Domain_Extent_Annotation ;
rdfs:comment 'N-acetyltransferase' .
?pfsb21 faldo:position ?thisPositionOn23 ;
rdf:type faldo:ExactPosition .
?pfse22 faldo:position ?thisPositionOn24 ;
rdf:type faldo:ExactPosition .
_:710162 a rdf:Statement ;
up:attribution _:710152 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:710163 a rdf:Statement ;
up:attribution _:710153 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:710164 a rdf:Statement ;
up:attribution _:710154 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:710165 a rdf:Statement ;
up:attribution _:710155 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:710166 a rdf:Statement ;
up:attribution _:710156 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:710167 a rdf:Statement ;
up:attribution _:710157 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:566 .
_:710168 a rdf:Statement ;
up:attribution _:710158 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0015940 .
_:710169 a rdf:Statement ;
up:source unirule:MF_02018 ;
rdf:subject ?pfs5 ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:710170 a rdf:Statement ;
up:attribution _:710159 ;
rdf:subject ?pfs5 ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:710171 a rdf:Statement ;
up:source unirule:MF_02018 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:710172 a rdf:Statement ;
up:attribution _:710160 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:710173 a rdf:Statement ;
up:source unirule:MF_02018 ;
rdf:subject ?pfs19 ;
rdf:predicate up:annotation ;
rdf:object ?annotation20 .
_:710174 a rdf:Statement ;
up:attribution _:710161 ;
rdf:subject ?pfs19 ;
rdf:predicate up:annotation ;
rdf:object ?annotation20 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_02018
#Rule MF_02018 Created by:? on:2015-02-16 Modified by:Edouard de Castro on:2022-11-19
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_02018 .
?thisOrganism rdfs:subClassOf+ taxon:91347 .
BIND(URI(CONCAT(STR(?this), '#MF_02018a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_02018a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_02018a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_02018a4')) AS ?annotation4) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch29 faldo:location ?templateMotifSequenceMatchRegionP3761330 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3761332 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP37613MF_0201825 .
?templateMotifSequenceMatchRegionP3761330 faldo:begin ?templateMotifSequenceMatchBeginP3761331 .
?templateMotifSequenceMatchBeginP3761331 faldo:position ?templateMotifSequenceMatchBeginPositionP3761326 ;
faldo:reference isoform:P37613-1 .
?templateMotifSequenceProfileAlignmentOperationP3761332 edam:has_input signature:MF_02018 ;
rdf:type edam:operation_0300 .
?targetMotifMatch33 faldo:location ?targetMotifMatchRegionMatch34 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0201836 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP37613MF_0201827 .
?targetMotifMatchRegionMatch34 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0201835 .
?targetMotifMatchRegionMatchBeginMF_0201835 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0201828 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0201836 edam:has_input signature:MF_02018 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37613MF_0201825, 1, (STRLEN(?templateMotifCigarP37613MF_0201825) - STRLEN(REPLACE(?templateMotifCigarP37613MF_0201825, CONCAT('^(?:-*[^-]){', STR(((66 - ?templateMotifSequenceMatchBeginPositionP3761326) + 1)), '}'), '')))), '[a-z]', '')) AS ?step137) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37613MF_0201827, 1, (STRLEN(?targetMotifMatchCigarP37613MF_0201827) - STRLEN(REPLACE(?targetMotifMatchCigarP37613MF_0201827, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step137), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37613MF_0201827, 1, (STRLEN(?targetMotifMatchCigarP37613MF_0201827) - STRLEN(REPLACE(?targetMotifMatchCigarP37613MF_0201827, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step137), '}'), '')))), '[^-]', ''))) AS ?step238) .
BIND(((?step238 + ?targetMotifMatchRegionMatchBeginPositionMF_0201828) - 1) AS ?thisPositionOn10) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37613MF_0201825, 1, (STRLEN(?templateMotifCigarP37613MF_0201825) - STRLEN(REPLACE(?templateMotifCigarP37613MF_0201825, CONCAT('^(?:-*[^-]){', STR(((68 - ?templateMotifSequenceMatchBeginPositionP3761326) + 1)), '}'), '')))), '[a-z]', '')) AS ?step139) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37613MF_0201827, 1, (STRLEN(?targetMotifMatchCigarP37613MF_0201827) - STRLEN(REPLACE(?targetMotifMatchCigarP37613MF_0201827, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step139), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37613MF_0201827, 1, (STRLEN(?targetMotifMatchCigarP37613MF_0201827) - STRLEN(REPLACE(?targetMotifMatchCigarP37613MF_0201827, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step139), '}'), '')))), '[^-]', ''))) AS ?step240) .
BIND(((?step240 + ?targetMotifMatchRegionMatchBeginPositionMF_0201828) - 1) AS ?thisPositionOn11) .
BIND(?this AS ?pfs1t41) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb7) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse8) .
FILTER (REGEX('[LFM][ARNDCQEGHILKMFPSTWYVBZJUOX][VI]', SUBSTR(?thisSequenceValue, ?thisPositionOn10, (?thisPositionOn11 - ?thisPositionOn10)))) .
BIND(URI(CONCAT(STR(?this), '#MF_02018a6')) AS ?annotation6) .
BIND(?this AS ?pfs5) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch46 faldo:location ?templateMotifSequenceMatchRegionP3761347 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3761349 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP37613MF_0201842 .
?templateMotifSequenceMatchRegionP3761347 faldo:begin ?templateMotifSequenceMatchBeginP3761348 .
?templateMotifSequenceMatchBeginP3761348 faldo:position ?templateMotifSequenceMatchBeginPositionP3761343 ;
faldo:reference isoform:P37613-1 .
?templateMotifSequenceProfileAlignmentOperationP3761349 edam:has_input signature:MF_02018 ;
rdf:type edam:operation_0300 .
?targetMotifMatch50 faldo:location ?targetMotifMatchRegionMatch51 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0201853 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP37613MF_0201844 .
?targetMotifMatchRegionMatch51 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0201852 .
?targetMotifMatchRegionMatchBeginMF_0201852 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0201845 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0201853 edam:has_input signature:MF_02018 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37613MF_0201842, 1, (STRLEN(?templateMotifCigarP37613MF_0201842) - STRLEN(REPLACE(?templateMotifCigarP37613MF_0201842, CONCAT('^(?:-*[^-]){', STR(((72 - ?templateMotifSequenceMatchBeginPositionP3761343) + 1)), '}'), '')))), '[a-z]', '')) AS ?step154) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37613MF_0201844, 1, (STRLEN(?targetMotifMatchCigarP37613MF_0201844) - STRLEN(REPLACE(?targetMotifMatchCigarP37613MF_0201844, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37613MF_0201844, 1, (STRLEN(?targetMotifMatchCigarP37613MF_0201844) - STRLEN(REPLACE(?targetMotifMatchCigarP37613MF_0201844, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), '')))), '[^-]', ''))) AS ?step255) .
BIND(((?step255 + ?targetMotifMatchRegionMatchBeginPositionMF_0201845) - 1) AS ?thisPositionOn17) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37613MF_0201842, 1, (STRLEN(?templateMotifCigarP37613MF_0201842) - STRLEN(REPLACE(?templateMotifCigarP37613MF_0201842, CONCAT('^(?:-*[^-]){', STR(((79 - ?templateMotifSequenceMatchBeginPositionP3761343) + 1)), '}'), '')))), '[a-z]', '')) AS ?step156) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37613MF_0201844, 1, (STRLEN(?targetMotifMatchCigarP37613MF_0201844) - STRLEN(REPLACE(?targetMotifMatchCigarP37613MF_0201844, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step156), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37613MF_0201844, 1, (STRLEN(?targetMotifMatchCigarP37613MF_0201844) - STRLEN(REPLACE(?targetMotifMatchCigarP37613MF_0201844, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step156), '}'), '')))), '[^-]', ''))) AS ?step257) .
BIND(((?step257 + ?targetMotifMatchRegionMatchBeginPositionMF_0201845) - 1) AS ?thisPositionOn18) .
BIND(?this AS ?pfs1t58) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) .
FILTER (REGEX('TRR[RH]G[VI]G[ARNDCQEGHILKMFPSTWYVBZJUOX]', SUBSTR(?thisSequenceValue, ?thisPositionOn17, (?thisPositionOn18 - ?thisPositionOn17)))) .
BIND(URI(CONCAT(STR(?this), '#MF_02018a13')) AS ?annotation13) .
BIND(?this AS ?pfs12) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch63 faldo:location ?templateMotifSequenceMatchRegionP3761364 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3761366 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP37613MF_0201859 .
?templateMotifSequenceMatchRegionP3761364 faldo:begin ?templateMotifSequenceMatchBeginP3761365 .
?templateMotifSequenceMatchBeginP3761365 faldo:position ?templateMotifSequenceMatchBeginPositionP3761360 ;
faldo:reference isoform:P37613-1 .
?templateMotifSequenceProfileAlignmentOperationP3761366 edam:has_input signature:MF_02018 ;
rdf:type edam:operation_0300 .
?targetMotifMatch67 faldo:location ?targetMotifMatchRegionMatch68 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0201870 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP37613MF_0201861 .
?targetMotifMatchRegionMatch68 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0201869 .
?targetMotifMatchRegionMatchBeginMF_0201869 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0201862 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0201870 edam:has_input signature:MF_02018 ;
rdf:type edam:operation_0300 .
?this rdfs:seeAlso |
| http://purl.uniprot.org/unirules/MF_02018 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_02018#construct |