| http://purl.uniprot.org/unirules/MF_02101#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02101#construct-template-7 |
| http://purl.uniprot.org/unirules/MF_02101#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02101#construct-template-23 |
| http://purl.uniprot.org/unirules/MF_02101#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02101#construct-template-26 |
| http://purl.uniprot.org/unirules/MF_02101#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02101#construct-template-5 |
| http://purl.uniprot.org/unirules/MF_02101#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02101#construct-template-43 |
| http://purl.uniprot.org/unirules/MF_02101#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02101#construct-template-13 |
| http://purl.uniprot.org/unirules/MF_02101#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02101#construct-template-19 |
| http://purl.uniprot.org/unirules/MF_02101#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02101#construct-template-28 |
| http://purl.uniprot.org/unirules/MF_02101#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02101#construct-template-48 |
| http://purl.uniprot.org/unirules/MF_02101#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02101#construct-template-47 |
| http://purl.uniprot.org/unirules/MF_02101#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_02101#construct-template-49 |
| http://purl.uniprot.org/unirules/MF_02101#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_02101#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_02101#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_02101#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_02101#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_02101#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:746001 up:source unirule:MF_02101 .
_:746002 up:source unirule:MF_02101 .
_:746003 up:source unirule:MF_02101 .
_:746004 up:source unirule:MF_02101 .
_:746005 up:source unirule:MF_02101 .
_:746006 up:source unirule:MF_02101 .
_:746007 up:source unirule:MF_02101 .
_:746008 up:source unirule:MF_02101 .
_:746009 up:source unirule:MF_02101 .
_:746010 up:source unirule:MF_02101 .
_:746011 up:source unirule:MF_02101 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ,
?annotation6 ,
?annotation7 ;
up:classifiedWith GO:0016790 ,
GO:0042372 ,
keyword:378 ;
up:recommendedName ?name0 .
?name0 up:ecName '3.1.2.28' ;
up:fullName '1,4-dihydroxy-2-naphthoyl-CoA hydrolase' ;
up:shortName 'DHNA-CoA hydrolase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'DHNA-CoA thioesterase' ;
rdf:type up:Structured_Name .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA), a reaction involved in phylloquinone (vitamin K1) biosynthesis.' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 a up:Pathway_Annotation ;
rdfs:comment 'Quinol/quinone metabolism; 1,4-dihydroxy-2-naphthoate biosynthesis; 1,4-dihydroxy-2-naphthoate from chorismate: step 7/7.' .
?annotation6 a up:Pathway_Annotation ;
rdfs:comment 'Cofactor biosynthesis; phylloquinone biosynthesis.' .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. DHNA-CoA hydrolase subfamily.' .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
rdf:type up:Active_Site_Annotation .
?pfsb10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
_:746012 a rdf:Statement ;
up:attribution _:746001 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:746013 a rdf:Statement ;
up:attribution _:746002 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:746014 a rdf:Statement ;
up:attribution _:746003 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:746015 a rdf:Statement ;
up:attribution _:746004 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:746016 a rdf:Statement ;
up:attribution _:746005 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:746017 a rdf:Statement ;
up:attribution _:746006 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:746018 a rdf:Statement ;
up:attribution _:746007 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:746019 a rdf:Statement ;
up:attribution _:746008 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:378 .
_:746020 a rdf:Statement ;
up:attribution _:746009 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016790 .
_:746021 a rdf:Statement ;
up:attribution _:746010 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0042372 .
_:746022 a rdf:Statement ;
up:source unirule:MF_02101 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:746023 a rdf:Statement ;
up:attribution _:746011 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_02101
#Rule MF_02101 Created by:? on:2009-05-15 Modified by:Edouard de Castro on:2023-02-17
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_02101 .
?thisOrganism rdfs:subClassOf+ taxon:1117 .
BIND(URI(CONCAT(STR(?this), '#MF_02101a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_02101a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_02101a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_02101a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_02101a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_02101a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_02101a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch18 faldo:location ?templateMotifSequenceMatchRegionQ5577719 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ5577721 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ55777MF_0210114 .
?templateMotifSequenceMatchRegionQ5577719 faldo:begin ?templateMotifSequenceMatchBeginQ5577720 .
?templateMotifSequenceMatchBeginQ5577720 faldo:position ?templateMotifSequenceMatchBeginPositionQ5577715 ;
faldo:reference isoform:Q55777-1 .
?templateMotifSequenceProfileAlignmentOperationQ5577721 edam:has_input signature:MF_02101 ;
rdf:type edam:operation_0300 .
?targetMotifMatch22 faldo:location ?targetMotifMatchRegionMatch23 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0210125 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ55777MF_0210116 .
?targetMotifMatchRegionMatch23 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0210124 .
?targetMotifMatchRegionMatchBeginMF_0210124 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0210117 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0210125 edam:has_input signature:MF_02101 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ55777MF_0210114, 1, (STRLEN(?templateMotifCigarQ55777MF_0210114) - STRLEN(REPLACE(?templateMotifCigarQ55777MF_0210114, CONCAT('^(?:-*[^-]){', STR(((16 - ?templateMotifSequenceMatchBeginPositionQ5577715) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ55777MF_0210116, 1, (STRLEN(?targetMotifMatchCigarQ55777MF_0210116) - STRLEN(REPLACE(?targetMotifMatchCigarQ55777MF_0210116, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ55777MF_0210116, 1, (STRLEN(?targetMotifMatchCigarQ55777MF_0210116) - STRLEN(REPLACE(?targetMotifMatchCigarQ55777MF_0210116, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) .
BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0210117) - 1) AS ?thisPositionOn12) .
BIND(?thisPositionOn12 AS ?thisPositionOn13) .
BIND(?this AS ?pfs1t28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn12, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_02101a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_02101 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_02101#construct |
