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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-56 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-38 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-31 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-0 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-2 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-34 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-39 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-3 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-60 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-16 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-44 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-1 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-65 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-54 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-40 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-5 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-64 |
| http://purl.uniprot.org/unirules/MF_03122#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03122#construct-template-66 |
| http://purl.uniprot.org/unirules/MF_03122#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_03122#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_03122#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_03122#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_03122#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_03122#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:825870 up:source unirule:MF_03122 . _:825871 up:source unirule:MF_03122 . _:825872 up:source unirule:MF_03122 . _:825873 up:source unirule:MF_03122 . _:825874 up:source unirule:MF_03122 . _:825875 up:source unirule:MF_03122 . _:825876 up:source unirule:MF_03122 . _:825877 up:source unirule:MF_03122 . _:825878 up:source unirule:MF_03122 . _:825879 up:source unirule:MF_03122 . _:825880 up:source unirule:MF_03122 . _:825881 up:source unirule:MF_03122 . _:825882 up:source unirule:MF_03122 . _:825883 up:source unirule:MF_03122 . _:825884 up:source unirule:MF_03122 . ?this up:annotation ?annotation1 ; up:classifiedWith GO:0003735 , GO:0006412 , GO:0022627 , keyword:687 , keyword:689 , keyword:963 ; up:recommendedName ?name0 . ?name0 up:fullName 'Small ribosomal subunit protein eS1' ; rdf:type up:Structured_Name . ?annotation1 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the eukaryotic ribosomal protein eS1 family.' . ?case2 up:classifiedWith keyword:7 . ?case4 up:classifiedWith keyword:539 . ?case6 up:classifiedWith keyword:217 , keyword:896 . ?case10 up:classifiedWith keyword:221 . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment 'N-acetylalanine; partial' . ?pfsb14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfs18 up:annotation ?annotation19 . ?annotation19 faldo:begin ?pfsb20 ; faldo:end ?pfse21 ; rdf:type up:Initiator_Methionine_Annotation ; rdfs:comment 'Removed' . ?pfsb20 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse21 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . _:825885 a rdf:Statement ; up:attribution _:825870 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:825886 a rdf:Statement ; up:attribution _:825871 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:825887 a rdf:Statement ; up:attribution _:825872 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:687 . _:825888 a rdf:Statement ; up:attribution _:825873 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:689 . _:825889 a rdf:Statement ; up:attribution _:825874 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:825890 a rdf:Statement ; up:attribution _:825875 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0022627 . _:825891 a rdf:Statement ; up:attribution _:825876 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003735 . _:825892 a rdf:Statement ; up:attribution _:825877 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006412 . _:825893 a rdf:Statement ; up:attribution _:825878 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object keyword:7 . _:825894 a rdf:Statement ; up:attribution _:825879 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:539 . _:825895 a rdf:Statement ; up:attribution _:825880 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object keyword:217 . _:825896 a rdf:Statement ; up:attribution _:825881 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object keyword:896 . _:825897 a rdf:Statement ; up:attribution _:825882 ; rdf:subject ?case10 ; rdf:predicate up:classifiedWith ; rdf:object keyword:221 . _:825898 a rdf:Statement ; up:source unirule:MF_03122 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:825899 a rdf:Statement ; up:attribution _:825883 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:825900 a rdf:Statement ; up:source unirule:MF_03122 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:825901 a rdf:Statement ; up:attribution _:825884 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_03122 #Rule MF_03122 Created by:? on:2012-09-26 Modified by:Andrea Auchincloss on:2023-09-22 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_03122 . ?thisOrganism rdfs:subClassOf+ taxon:2759 . BIND(URI(CONCAT(STR(?this), '#MF_03122a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_03122a1')) AS ?annotation1) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch28 faldo:location ?templateMotifSequenceMatchRegionP3344229 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3344231 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33442MF_0312224 . ?templateMotifSequenceMatchRegionP3344229 faldo:begin ?templateMotifSequenceMatchBeginP3344230 . ?templateMotifSequenceMatchBeginP3344230 faldo:position ?templateMotifSequenceMatchBeginPositionP3344225 ; faldo:reference isoform:P33442-1 . ?templateMotifSequenceProfileAlignmentOperationP3344231 edam:has_input signature:MF_03122 ; rdf:type edam:operation_0300 . ?targetMotifMatch32 faldo:location ?targetMotifMatchRegionMatch33 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0312235 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33442MF_0312226 . ?targetMotifMatchRegionMatch33 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0312234 . ?targetMotifMatchRegionMatchBeginMF_0312234 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0312227 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0312235 edam:has_input signature:MF_03122 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagacetyl) . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4751 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33442MF_0312224, 1, (STRLEN(?templateMotifCigarP33442MF_0312224) - STRLEN(REPLACE(?templateMotifCigarP33442MF_0312224, CONCAT('^(?:-*[^-]){', STR(((2 - ?templateMotifSequenceMatchBeginPositionP3344225) + 1)), '}'), '')))), '[a-z]', '')) AS ?step136) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33442MF_0312226, 1, (STRLEN(?targetMotifMatchCigarP33442MF_0312226) - STRLEN(REPLACE(?targetMotifMatchCigarP33442MF_0312226, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step136), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33442MF_0312226, 1, (STRLEN(?targetMotifMatchCigarP33442MF_0312226) - STRLEN(REPLACE(?targetMotifMatchCigarP33442MF_0312226, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step136), '}'), '')))), '[^-]', ''))) AS ?step237) . BIND(((?step237 + ?targetMotifMatchRegionMatchBeginPositionMF_0312227) - 1) AS ?thisPositionOn16) . BIND(?thisPositionOn16 AS ?thisPositionOn17) . BIND(?this AS ?pfs1t38) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse15) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1) = 'A')) . BIND(URI(CONCAT(STR(?this), '#MF_03122a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch43 faldo:location ?templateMotifSequenceMatchRegionP6124744 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP6124746 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP61247MF_0312239 . ?templateMotifSequenceMatchRegionP6124744 faldo:begin ?templateMotifSequenceMatchBeginP6124745 . ?templateMotifSequenceMatchBeginP6124745 faldo:position ?templateMotifSequenceMatchBeginPositionP6124740 ; faldo:reference isoform:P61247-1 . ?templateMotifSequenceProfileAlignmentOperationP6124746 edam:has_input signature:MF_03122 ; rdf:type edam:operation_0300 . ?targetMotifMatch47 faldo:location ?targetMotifMatchRegionMatch48 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0312250 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP61247MF_0312241 . ?targetMotifMatchRegionMatch48 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0312249 . ?targetMotifMatchRegionMatchBeginMF_0312249 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0312242 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0312250 edam:has_input signature:MF_03122 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP61247MF_0312239, 1, (STRLEN(?templateMotifCigarP61247MF_0312239) - STRLEN(REPLACE(?templateMotifCigarP61247MF_0312239, CONCAT('^(?:-*[^-]){', STR(((1 - ?templateMotifSequenceMatchBeginPositionP6124740) + 1)), '}'), '')))), '[a-z]', '')) AS ?step151) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP61247MF_0312241, 1, (STRLEN(?targetMotifMatchCigarP61247MF_0312241) - STRLEN(REPLACE(?targetMotifMatchCigarP61247MF_0312241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP61247MF_0312241, 1, (STRLEN(?targetMotifMatchCigarP61247MF_0312241) - STRLEN(REPLACE(?targetMotifMatchCigarP61247MF_0312241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), '')))), '[^-]', ''))) AS ?step252) . BIND(((?step252 + ?targetMotifMatchRegionMatchBeginPositionMF_0312242) - 1) AS ?thisPositionOn22) . BIND(?thisPositionOn22 AS ?thisPositionOn23) . BIND(?this AS ?pfs2t53) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb20) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse21) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1) = 'M')) . BIND(URI(CONCAT(STR(?this), '#MF_03122a19')) AS ?annotation19) . BIND(?this AS ?pfs18) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag54) . } BIND(IF(BOUND(?tagacetyl), ?caseWithTag54, ?UNBOUND_VARIABLE) AS ?case2) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4751 . BIND(?this AS ?case3) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(?this AS ?case4) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:7742 . BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:7214 . BIND(?this AS ?case6) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:6237 . BIND(?this AS ?case7) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:33208 . })) . BIND(?this AS ?case8) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:40674 . })) . BIND(?this AS ?case9) . } OPTIONAL { ?this a up:Protein . VALUES ?supertaxon55 {taxon:40674 taxon:7214} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon55 . BIND(?this AS ?case10) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:33208 . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:40674 . })) . BIND(?this AS ?case11) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_03122 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_03122#construct |