| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-48 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-57 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-45 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-58 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-66 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-64 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-31 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-62 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-47 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-49 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-60 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-51 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-4 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-20 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-53 |
| http://purl.uniprot.org/unirules/MF_04043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04043#construct-template-52 |
| http://purl.uniprot.org/unirules/MF_04043#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_04043#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_04043#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_04043#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_04043#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_04043#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:909927 up:source unirule:MF_04043 .
_:909928 up:source unirule:MF_04043 .
_:909929 up:source unirule:MF_04043 .
_:909930 up:source unirule:MF_04043 .
_:909931 up:source unirule:MF_04043 .
_:909932 up:source unirule:MF_04043 .
_:909933 up:source unirule:MF_04043 .
_:909934 up:source unirule:MF_04043 .
_:909935 up:source unirule:MF_04043 .
_:909936 up:source unirule:MF_04043 .
_:909937 up:source unirule:MF_04043 .
_:909938 up:source unirule:MF_04043 .
_:909939 up:source unirule:MF_04043 .
_:909940 up:source unirule:MF_04043 .
_:909941 up:source unirule:MF_04043 .
?this up:annotation ?annotation1 ,
?annotation2 ,
?annotation3 ,
?annotation8 ;
up:classifiedWith GO:0019033 ,
GO:0019068 ,
GO:0039701 ,
GO:0042802 ,
keyword:1035 ,
keyword:1040 ,
keyword:1048 ,
keyword:920 ,
keyword:946 ;
up:recommendedName ?name0 .
?name0 up:fullName 'Inner tegument protein' ;
rdf:type up:Structured_Name .
?annotation1 a up:Function_Annotation ;
rdfs:comment 'Plays an essential role in cytoplasmic secondary envelopment during viral egress. Interacts with the capsid via the large tegument protein/LTP and participates in its transport to the host trans-Golgi network (TGN) where secondary envelopment occurs. Modulates tegumentation and capsid accumulation at the viral assembly complex.' .
?annotation2 a up:Subunit_Annotation ;
rdfs:comment 'Interacts (via C-teminus) with the large tegument protein/LTP (via N-terminus).' .
?annotation3 a up:Subcellular_Location_Annotation .
?annotation3li4 up:cellularComponent .
?annotation3li5 up:cellularComponent .
?annotation3li6 up:cellularComponent .
?annotation3li7 up:cellularComponent .
?annotation8 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the herpesviridae inner tegument protein family.' .
?pfs9 up:annotation ?annotation10 .
?annotation10 faldo:begin ?pfsb11 ;
faldo:end ?pfse12 ;
rdf:type up:Region_Annotation ;
rdfs:comment 'Interaction with large tegument protein' .
?pfsb11 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?pfse12 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
_:909942 a rdf:Statement ;
up:attribution _:909927 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:909943 a rdf:Statement ;
up:attribution _:909928 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation1 .
_:909944 a rdf:Statement ;
up:attribution _:909929 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:909945 a rdf:Statement ;
up:attribution _:909930 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:909946 a rdf:Statement ;
up:attribution _:909931 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:909947 a rdf:Statement ;
up:attribution _:909932 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1035 .
_:909948 a rdf:Statement ;
up:attribution _:909933 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1040 .
_:909949 a rdf:Statement ;
up:attribution _:909934 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1048 .
_:909950 a rdf:Statement ;
up:attribution _:909935 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:946 .
_:909951 a rdf:Statement ;
up:attribution _:909936 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:920 .
_:909952 a rdf:Statement ;
up:attribution _:909937 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019033 .
_:909953 a rdf:Statement ;
up:attribution _:909938 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0042802 .
_:909954 a rdf:Statement ;
up:attribution _:909939 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0039701 .
_:909955 a rdf:Statement ;
up:attribution _:909940 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019068 .
_:909956 a rdf:Statement ;
up:source unirule:MF_04043 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:909957 a rdf:Statement ;
up:attribution _:909941 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_04043
#Rule MF_04043 Created by:? on:2016-09-29 Modified by:Edouard de Castro on:2019-11-20
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_04043 .
?thisOrganism rdfs:subClassOf+ taxon:10292 .
BIND(URI(CONCAT(STR(?this), '#MF_04043a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_04043a1')) AS ?annotation1) .
BIND(URI(CONCAT(STR(?this), '#MF_04043a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_04043a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_04043a8')) AS ?annotation8) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch19 faldo:location ?templateMotifSequenceMatchRegionP1022120 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP1022122 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP10221MF_0404315 .
?templateMotifSequenceMatchRegionP1022120 faldo:begin ?templateMotifSequenceMatchBeginP1022121 .
?templateMotifSequenceMatchBeginP1022121 faldo:position ?templateMotifSequenceMatchBeginPositionP1022116 ;
faldo:reference isoform:P10221-1 .
?templateMotifSequenceProfileAlignmentOperationP1022122 edam:has_input signature:MF_04043 ;
rdf:type edam:operation_0300 .
?targetMotifMatch23 faldo:location ?targetMotifMatchRegionMatch24 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0404326 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP10221MF_0404317 .
?targetMotifMatchRegionMatch24 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0404325 .
?targetMotifMatchRegionMatchBeginMF_0404325 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0404318 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0404326 edam:has_input signature:MF_04043 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10221MF_0404315, 1, (STRLEN(?templateMotifCigarP10221MF_0404315) - STRLEN(REPLACE(?templateMotifCigarP10221MF_0404315, CONCAT('^(?:-*[^-]){', STR(((568 - ?templateMotifSequenceMatchBeginPositionP1022116) + 1)), '}'), '')))), '[a-z]', '')) AS ?step127) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10221MF_0404317, 1, (STRLEN(?targetMotifMatchCigarP10221MF_0404317) - STRLEN(REPLACE(?targetMotifMatchCigarP10221MF_0404317, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10221MF_0404317, 1, (STRLEN(?targetMotifMatchCigarP10221MF_0404317) - STRLEN(REPLACE(?targetMotifMatchCigarP10221MF_0404317, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step127), '}'), '')))), '[^-]', ''))) AS ?step228) .
BIND(((?step228 + ?targetMotifMatchRegionMatchBeginPositionMF_0404318) - 1) AS ?thisPositionOn13) .
BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn14) .
BIND(?this AS ?pfs1t29) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb11) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse12) .
FILTER ((BOUND(?thisPositionOn13) && BOUND(?thisPositionOn14))) .
BIND(URI(CONCAT(STR(?this), '#MF_04043a10')) AS ?annotation10) .
BIND(?this AS ?pfs9) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_04043 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_04043#construct |
