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SubjectPredicateObject
http://purl.uniprot.org/unirules/MF_04160#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04160#construct-template-57
http://purl.uniprot.org/unirules/MF_04160#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04160#construct-template-46
http://purl.uniprot.org/unirules/MF_04160#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04160#construct-template-56
http://purl.uniprot.org/unirules/MF_04160#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04160#construct-template-51
http://purl.uniprot.org/unirules/MF_04160#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04160#construct-template-59
http://purl.uniprot.org/unirules/MF_04160#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04160#construct-template-45
http://purl.uniprot.org/unirules/MF_04160#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04160#construct-template-52
http://purl.uniprot.org/unirules/MF_04160#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04160#construct-template-55
http://purl.uniprot.org/unirules/MF_04160#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04160#construct-template-54
http://purl.uniprot.org/unirules/MF_04160#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04160#construct-template-44
http://purl.uniprot.org/unirules/MF_04160#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04160#construct-template-50
http://purl.uniprot.org/unirules/MF_04160#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04160#construct-template-60
http://purl.uniprot.org/unirules/MF_04160#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04160#construct-template-48
http://purl.uniprot.org/unirules/MF_04160#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_04160#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_04160#construct-where-list-0
http://purl.uniprot.org/unirules/MF_04160#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_04160#construct-template-list-0
http://purl.uniprot.org/unirules/MF_04160#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:979324 up:source unirule:MF_04160 . _:979325 up:source unirule:MF_04160 . _:979326 up:source unirule:MF_04160 . _:979327 up:source unirule:MF_04160 . _:979328 up:source unirule:MF_04160 . _:979329 up:source unirule:MF_04160 . _:979330 up:source unirule:MF_04160 . _:979331 up:source unirule:MF_04160 . _:979332 up:source unirule:MF_04160 . _:979333 up:source unirule:MF_04160 . ?this up:annotation ?annotation1 , ?annotation2 ; up:classifiedWith GO:0004519 , GO:0004527 , keyword:255 , keyword:269 ; up:recommendedName ?name0 . ?name0 up:ecName '3.1.-.-' ; up:fullName 'Head completion nuclease' ; rdf:type up:Structured_Name . ?annotation1 a up:Function_Annotation ; rdfs:comment 'During phage morphogenesis, plays an essential role in the head-tail joining step. The associated nuclease activity is essential for morphogenesis, possibly by cleaving packaged DNA to enable the joining of heads to tails. Displays both exo- and endonuclease activity.' . ?annotation2 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the Caudovirales head completion nuclease family.' . ?pfs3 up:annotation ?annotation4 . ?annotation4 faldo:begin ?pfsb5 ; faldo:end ?pfse6 ; rdf:type up:Active_Site_Annotation . ?pfsb5 faldo:position ?thisPositionOn7 ; rdf:type faldo:ExactPosition . ?pfse6 faldo:position ?thisPositionOn8 ; rdf:type faldo:ExactPosition . ?pfs9 up:annotation ?annotation10 . ?annotation10 faldo:begin ?pfsb11 ; faldo:end ?pfse12 ; rdf:type up:Active_Site_Annotation . ?pfsb11 faldo:position ?thisPositionOn13 ; rdf:type faldo:ExactPosition . ?pfse12 faldo:position ?thisPositionOn14 ; rdf:type faldo:ExactPosition . ?pfs15 up:annotation ?annotation16 . ?annotation16 faldo:begin ?pfsb17 ; faldo:end ?pfse18 ; rdf:type up:Active_Site_Annotation . ?pfsb17 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?pfse18 faldo:position ?thisPositionOn20 ; rdf:type faldo:ExactPosition . _:979334 a rdf:Statement ; up:attribution _:979324 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:979335 a rdf:Statement ; up:attribution _:979325 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:979336 a rdf:Statement ; up:attribution _:979326 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:979337 a rdf:Statement ; up:attribution _:979327 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:255 . _:979338 a rdf:Statement ; up:attribution _:979328 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:269 . _:979339 a rdf:Statement ; up:attribution _:979329 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004527 . _:979340 a rdf:Statement ; up:attribution _:979330 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004519 . _:979341 a rdf:Statement ; up:source unirule:MF_04160 ; rdf:subject ?pfs3 ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:979342 a rdf:Statement ; up:attribution _:979331 ; rdf:subject ?pfs3 ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:979343 a rdf:Statement ; up:source unirule:MF_04160 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:979344 a rdf:Statement ; up:attribution _:979332 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:979345 a rdf:Statement ; up:source unirule:MF_04160 ; rdf:subject ?pfs15 ; rdf:predicate up:annotation ; rdf:object ?annotation16 . _:979346 a rdf:Statement ; up:attribution _:979333 ; rdf:subject ?pfs15 ; rdf:predicate up:annotation ; rdf:object ?annotation16 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_04160 #Rule MF_04160 Created by:? on:2021-04-06 Modified by:ipedruzz on:2021-04-20 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_04160 . ?thisOrganism rdfs:subClassOf+ taxon:10239 . BIND(URI(CONCAT(STR(?this), '#MF_04160a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_04160a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_04160a2')) AS ?annotation2) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch25 faldo:location ?templateMotifSequenceMatchRegionP1507526 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP1507528 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP15075MF_0416021 . ?templateMotifSequenceMatchRegionP1507526 faldo:begin ?templateMotifSequenceMatchBeginP1507527 . ?templateMotifSequenceMatchBeginP1507527 faldo:position ?templateMotifSequenceMatchBeginPositionP1507522 ; faldo:reference isoform:P15075-1 . ?templateMotifSequenceProfileAlignmentOperationP1507528 edam:has_input signature:MF_04160 ; rdf:type edam:operation_0300 . ?targetMotifMatch29 faldo:location ?targetMotifMatchRegionMatch30 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0416032 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP15075MF_0416023 . ?targetMotifMatchRegionMatch30 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0416031 . ?targetMotifMatchRegionMatchBeginMF_0416031 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0416024 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0416032 edam:has_input signature:MF_04160 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP15075MF_0416021, 1, (STRLEN(?templateMotifCigarP15075MF_0416021) - STRLEN(REPLACE(?templateMotifCigarP15075MF_0416021, CONCAT('^(?:-*[^-]){', STR(((29 - ?templateMotifSequenceMatchBeginPositionP1507522) + 1)), '}'), '')))), '[a-z]', '')) AS ?step133) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP15075MF_0416023, 1, (STRLEN(?targetMotifMatchCigarP15075MF_0416023) - STRLEN(REPLACE(?targetMotifMatchCigarP15075MF_0416023, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step133), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP15075MF_0416023, 1, (STRLEN(?targetMotifMatchCigarP15075MF_0416023) - STRLEN(REPLACE(?targetMotifMatchCigarP15075MF_0416023, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step133), '}'), '')))), '[^-]', ''))) AS ?step234) . BIND(((?step234 + ?targetMotifMatchRegionMatchBeginPositionMF_0416024) - 1) AS ?thisPositionOn7) . BIND(?thisPositionOn7 AS ?thisPositionOn8) . BIND(?this AS ?pfs1t35) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn7))) AS ?pfsb5) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn8))) AS ?pfse6) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn7, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_04160a4')) AS ?annotation4) . BIND(?this AS ?pfs3) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch40 faldo:location ?templateMotifSequenceMatchRegionP1507541 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP1507543 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP15075MF_0416036 . ?templateMotifSequenceMatchRegionP1507541 faldo:begin ?templateMotifSequenceMatchBeginP1507542 . ?templateMotifSequenceMatchBeginP1507542 faldo:position ?templateMotifSequenceMatchBeginPositionP1507537 ; faldo:reference isoform:P15075-1 . ?templateMotifSequenceProfileAlignmentOperationP1507543 edam:has_input signature:MF_04160 ; rdf:type edam:operation_0300 . ?targetMotifMatch44 faldo:location ?targetMotifMatchRegionMatch45 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0416047 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP15075MF_0416038 . ?targetMotifMatchRegionMatch45 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0416046 . ?targetMotifMatchRegionMatchBeginMF_0416046 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0416039 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0416047 edam:has_input signature:MF_04160 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP15075MF_0416036, 1, (STRLEN(?templateMotifCigarP15075MF_0416036) - STRLEN(REPLACE(?templateMotifCigarP15075MF_0416036, CONCAT('^(?:-*[^-]){', STR(((68 - ?templateMotifSequenceMatchBeginPositionP1507537) + 1)), '}'), '')))), '[a-z]', '')) AS ?step148) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP15075MF_0416038, 1, (STRLEN(?targetMotifMatchCigarP15075MF_0416038) - STRLEN(REPLACE(?targetMotifMatchCigarP15075MF_0416038, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP15075MF_0416038, 1, (STRLEN(?targetMotifMatchCigarP15075MF_0416038) - STRLEN(REPLACE(?targetMotifMatchCigarP15075MF_0416038, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), '')))), '[^-]', ''))) AS ?step249) . BIND(((?step249 + ?targetMotifMatchRegionMatchBeginPositionMF_0416039) - 1) AS ?thisPositionOn13) . BIND(?thisPositionOn13 AS ?thisPositionOn14) . BIND(?this AS ?pfs1t50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb11) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse12) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn13, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_04160a10')) AS ?annotation10) . BIND(?this AS ?pfs9) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch55 faldo:location ?templateMotifSequenceMatchRegionP1507556 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP1507558 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP15075MF_0416051 . ?templateMotifSequenceMatchRegionP1507556 faldo:begin ?templateMotifSequenceMatchBeginP1507557 . ?templateMotifSequenceMatchBeginP1507557 faldo:position ?templateMotifSequenceMatchBeginPositionP1507552 ; faldo:reference isoform:P15075-1 . ?templateMotifSequenceProfileAlignmentOperationP1507558 edam:has_input signature:MF_04160 ; rdf:type edam:operation_0300 . ?targetMotifMatch59 faldo:location ?targetMotifMatchRegionMatch60 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0416062 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP15075MF_0416053 . ?targetMotifMatchRegionMatch60 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0416061 . ?targetMotifMatchRegionMatchBeginMF_0416061 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0416054 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0416062 edam:has_input signature:MF_04160 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP15075MF_0416051, 1, (STRLEN(?templateMotifCigarP15075MF_0416051) - STRLEN(REPLACE(?templateMotifCigarP15075MF_0416051, CONCAT('^(?:-*[^-]){', STR(((84 - ?templateMotifSequenceMatchBeginPositionP1507552) + 1)), '}'), '')))), '[a-z]', '')) AS ?step163) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP15075MF_0416053, 1, (STRLEN(?targetMotifMatchCigarP15075MF_0416053) - STRLEN(REPLACE(?targetMotifMatchCigarP15075MF_0416053, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step163), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP15075MF_0416053, 1, (STRLEN(?targetMotifMatchCigarP15075MF_0416053) - STRLEN(REPLACE(?targetMotifMatchCigarP15075MF_0416053, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step163), '}'), '')))), '[^-]', ''))) AS ?step264) . BIND(((?step264 + ?targetMotifMatchRegionMatchBeginPositionMF_0416054) - 1) AS ?thisPositionOn19) . BIND(?thisPositionOn19 AS ?thisPositionOn20) . BIND(?this AS ?pfs1t65) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb17) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse18) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn19, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_04160a16')) AS ?annotation16) . BIND(?this AS ?pfs15) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_04160http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_04160#construct
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