| http://purl.uniprot.org/unirules/MF_02023#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:712865 up:source unirule:MF_02023 .
_:712866 up:source unirule:MF_02023 .
_:712867 up:source unirule:MF_02023 .
_:712868 up:source unirule:MF_02023 .
_:712869 up:source unirule:MF_02023 .
_:712870 up:source unirule:MF_02023 .
_:712871 up:source unirule:MF_02023 .
_:712872 up:source unirule:MF_02023 .
_:712873 up:source unirule:MF_02023 .
_:712874 up:source unirule:MF_02023 .
_:712875 up:source unirule:MF_02023 .
_:712876 up:source unirule:MF_02023 .
_:712877 up:source unirule:MF_02023 .
_:712878 up:source unirule:MF_02023 .
_:712879 up:source unirule:MF_02023 .
_:712880 up:source unirule:MF_02023 .
_:712881 up:source unirule:MF_02023 .
_:712882 up:source unirule:MF_02023 .
_:712883 up:source unirule:MF_02023 .
_:712884 up:source unirule:MF_02023 .
_:712885 up:source unirule:MF_02023 .
_:712886 up:source unirule:MF_02023 .
_:712887 up:source unirule:MF_02023 .
_:712888 up:source unirule:MF_02023 .
_:712889 up:source unirule:MF_02023 .
_:712890 up:source unirule:MF_02023 .
_:712891 up:source unirule:MF_02023 .
_:712892 up:source unirule:MF_02023 .
_:712893 up:source unirule:MF_02023 .
_:712894 up:source unirule:MF_02023 .
_:712895 up:source unirule:MF_02023 .
_:712896 up:source unirule:MF_02023 .
_:712897 up:source unirule:MF_02023 .
_:712898 up:source unirule:MF_02023 .
_:712899 up:source unirule:MF_02023 .
_:712900 up:source unirule:MF_02023 .
_:712901 up:source unirule:MF_02023 .
_:712902 up:source unirule:MF_02023 .
_:712903 up:source unirule:MF_02023 .
_:712904 up:source unirule:MF_02023 .
_:712905 up:source unirule:MF_02023 .
_:712906 up:source unirule:MF_02023 .
_:712907 up:source unirule:MF_02023 .
_:712908 up:source unirule:MF_02023 .
_:712909 up:source unirule:MF_02023 .
_:712910 up:source unirule:MF_02023 .
_:712911 up:source unirule:MF_02023 .
_:712912 up:source unirule:MF_02023 .
_:712913 up:source unirule:MF_02023 .
_:712914 up:source unirule:MF_02023 .
_:712915 up:source unirule:MF_02023 .
_:712916 up:source unirule:MF_02023 .
_:712917 up:source unirule:MF_02023 .
_:712918 up:source unirule:MF_02023 .
_:712919 up:source unirule:MF_02023 .
_:712920 up:source unirule:MF_02023 .
_:712921 up:source unirule:MF_02023 .
_:712922 up:source unirule:MF_02023 .
_:712923 up:source unirule:MF_02023 .
_:712924 up:source unirule:MF_02023 .
_:712925 up:source unirule:MF_02023 .
_:712926 up:source unirule:MF_02023 .
?this up:annotation ?annotation1 ,
?annotation2 ,
?annotation4 ,
?annotation5 ,
?annotation6 ,
?annotation7 ,
?annotation9 ;
up:classifiedWith GO:0005506 ,
GO:0005507 ,
GO:0016002 ,
GO:0020037 ,
GO:0042597 ,
GO:0070814 ,
keyword:186 ,
keyword:249 ,
keyword:349 ,
keyword:408 ,
keyword:479 ,
keyword:560 ,
keyword:574 ,
keyword:732 ,
keyword:763 ,
keyword:813 ;
up:precursor "true"^^xsd:boolean ;
up:recommendedName ?name0 .
?name0 up:ecName '1.8.99.-' ;
up:fullName 'Dissimilatory sulfite reductase' ;
rdf:type up:Structured_Name .
?annotation1 a up:Function_Annotation ;
rdfs:comment 'Respiratory sulfite reductase that catalyzes the reduction of sulfite to sulfide in a single step, consuming six electrons in the process.' .
?annotation2 up:activity ?activity3 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity3 up:catalyticActivity .
?annotation4 up:cofactor chebi:49552 ;
rdf:type up:Cofactor_Annotation ;
rdfs:comment 'Exposure to oxygen reduces copper binding and leads to the formation of a disulfide bond between the two Cys residues that bind the copper ion.' .
?annotation5 up:cofactor chebi:61717 ;
rdf:type up:Cofactor_Annotation ;
rdfs:comment 'Binds 8 heme c groups covalently per monomer.' .
?annotation6 a up:Pathway_Annotation ;
rdfs:comment 'Sulfur metabolism; sulfite reduction.' .
?annotation7 a up:Subcellular_Location_Annotation .
?annotation7li8 up:cellularComponent .
?annotation9 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the multiheme cytochrome c family.' .
?pfs10 up:annotation ?annotation11 .
?annotation11 faldo:begin ?pfsb12 ;
faldo:end ?pfse13 ;
up:ligand ?ligand14 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb12 faldo:position ?thisPositionOn15 ;
rdf:type faldo:ExactPosition .
?pfse13 faldo:position ?thisPositionOn16 ;
rdf:type faldo:ExactPosition .
?ligand14 up:ligandPart ?ligand14 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs17 up:annotation ?annotation18 .
?annotation18 faldo:begin ?pfsb19 ;
faldo:end ?pfse20 ;
up:ligand ?ligand21 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb19 faldo:position ?thisPositionOn22 ;
rdf:type faldo:ExactPosition .
?pfse20 faldo:position ?thisPositionOn23 ;
rdf:type faldo:ExactPosition .
?ligand21 up:ligandPart ?ligand21 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs24 up:annotation ?annotation25 .
?annotation25 faldo:begin ?pfsb26 ;
faldo:end ?pfse27 ;
up:ligand ?ligand28 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb26 faldo:position ?thisPositionOn29 ;
rdf:type faldo:ExactPosition .
?pfse27 faldo:position ?thisPositionOn30 ;
rdf:type faldo:ExactPosition .
?ligand28 up:ligandPart ?ligand28 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs31 up:annotation ?annotation32 .
?annotation32 faldo:begin ?pfsb33 ;
faldo:end ?pfse34 ;
up:ligand ?ligand35 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb33 faldo:position ?thisPositionOn36 ;
rdf:type faldo:ExactPosition .
?pfse34 faldo:position ?thisPositionOn37 ;
rdf:type faldo:ExactPosition .
?ligand35 up:ligandPart ?ligand35 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs38 up:annotation ?annotation39 .
?annotation39 faldo:begin ?pfsb40 ;
faldo:end ?pfse41 ;
up:ligand ?ligand42 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb40 faldo:position ?thisPositionOn43 ;
rdf:type faldo:ExactPosition .
?pfse41 faldo:position ?thisPositionOn44 ;
rdf:type faldo:ExactPosition .
?ligand42 up:ligandPart ?ligand42 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs45 up:annotation ?annotation46 .
?annotation46 faldo:begin ?pfsb47 ;
faldo:end ?pfse48 ;
up:ligand ?ligand49 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb47 faldo:position ?thisPositionOn50 ;
rdf:type faldo:ExactPosition .
?pfse48 faldo:position ?thisPositionOn51 ;
rdf:type faldo:ExactPosition .
?ligand49 up:ligandPart ?ligand49 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs52 up:annotation ?annotation53 .
?annotation53 faldo:begin ?pfsb54 ;
faldo:end ?pfse55 ;
up:ligand ?ligand56 ;
rdf:type up:Binding_Site_Annotation .
?pfsb54 faldo:position ?thisPositionOn57 ;
rdf:type faldo:ExactPosition .
?pfse55 faldo:position ?thisPositionOn58 ;
rdf:type faldo:ExactPosition .
?ligand56 rdfs:subClassOf chebi:49552 .
?pfs59 up:annotation ?annotation60 .
?annotation60 faldo:begin ?pfsb61 ;
faldo:end ?pfse62 ;
up:ligand ?ligand63 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb61 faldo:position ?thisPositionOn64 ;
rdf:type faldo:ExactPosition .
?pfse62 faldo:position ?thisPositionOn65 ;
rdf:type faldo:ExactPosition .
?ligand63 up:ligandPart ?ligand63 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs66 up:annotation ?annotation67 .
?annotation67 faldo:begin ?pfsb68 ;
faldo:end ?pfse69 ;
up:ligand ?ligand70 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb68 faldo:position ?thisPositionOn71 ;
rdf:type faldo:ExactPosition .
?pfse69 faldo:position ?thisPositionOn72 ;
rdf:type faldo:ExactPosition .
?ligand70 up:ligandPart ?ligand70 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs73 up:annotation ?annotation74 .
?annotation74 faldo:begin ?pfsb75 ;
faldo:end ?pfse76 ;
up:ligand ?ligand77 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb75 faldo:position ?thisPositionOn78 ;
rdf:type faldo:ExactPosition .
?pfse76 faldo:position ?thisPositionOn79 ;
rdf:type faldo:ExactPosition .
?ligand77 up:ligandPart ?ligand77 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs80 up:annotation ?annotation81 .
?annotation81 faldo:begin ?pfsb82 ;
faldo:end ?pfse83 ;
up:ligand ?ligand84 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb82 faldo:position ?thisPositionOn85 ;
rdf:type faldo:ExactPosition .
?pfse83 faldo:position ?thisPositionOn86 ;
rdf:type faldo:ExactPosition .
?ligand84 up:ligandPart ?ligand84 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs87 up:annotation ?annotation88 .
?annotation88 faldo:begin ?pfsb89 ;
faldo:end ?pfse90 ;
up:ligand ?ligand91 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb89 faldo:position ?thisPositionOn92 ;
rdf:type faldo:ExactPosition .
?pfse90 faldo:position ?thisPositionOn93 ;
rdf:type faldo:ExactPosition .
?ligand91 up:ligandPart ?ligand91 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs94 up:annotation ?annotation95 .
?annotation95 faldo:begin ?pfsb96 ;
faldo:end ?pfse97 ;
up:ligand ?ligand98 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb96 faldo:position ?thisPositionOn99 ;
rdf:type faldo:ExactPosition .
?pfse97 faldo:position ?thisPositionOn100 ;
rdf:type faldo:ExactPosition .
?ligand98 up:ligandPart ?ligand98 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs101 up:annotation ?annotation102 .
?annotation102 faldo:begin ?pfsb103 ;
faldo:end ?pfse104 ;
up:ligand ?ligand105 ;
rdf:type up:Binding_Site_Annotation .
?pfsb103 faldo:position ?thisPositionOn106 ;
rdf:type faldo:ExactPosition .
?pfse104 faldo:position ?thisPositionOn107 ;
rdf:type faldo:ExactPosition .
?ligand105 rdfs:subClassOf chebi:49552 .
?pfs108 up:annotation ?annotation109 .
?annotation109 faldo:begin ?pfsb110 ;
faldo:end ?pfse111 ;
up:ligand ?ligand112 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb110 faldo:position ?thisPositionOn113 ;
rdf:type faldo:ExactPosition .
?pfse111 faldo:position ?thisPositionOn114 ;
rdf:type faldo:ExactPosition .
?ligand112 up:ligandPart ?ligand112 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs115 up:annotation ?annotation116 .
?annotation116 faldo:begin ?pfsb117 ;
faldo:end ?pfse118 ;
up:ligand ?ligand119 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb117 faldo:position ?thisPositionOn120 ;
rdf:type faldo:ExactPosition .
?pfse118 faldo:position ?thisPositionOn121 ;
rdf:type faldo:ExactPosition .
?ligand119 up:ligandPart ?ligand119 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs122 up:annotation ?annotation123 .
?annotation123 faldo:begin ?pfsb124 ;
faldo:end ?pfse125 ;
up:ligand ?ligand126 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'axial binding residue' .
?pfsb124 faldo:position ?thisPositionOn127 ;
rdf:type faldo:ExactPosition .
?pfse125 faldo:position ?thisPositionOn128 ;
rdf:type faldo:ExactPosition .
?ligand126 up:ligandPart ?ligand126 ;
rdfs:subClassOf chebi:18248 ,
chebi:61717 .
?pfs129 up:annotation ?annotation130 .
?annotation130 faldo:begin ?pfsb131 ;
faldo:end ?pfse132 ;
up:ligand ?ligand133 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb131 faldo:position ?thisPositionOn134 ;
rdf:type faldo:ExactPosition .
?pfse132 faldo:position ?thisPositionOn135 ;
rdf:type faldo:ExactPosition .
?ligand133 rdfs:subClassOf chebi:61717 .
?pfs136 up:annotation ?annotation137 .
?annotation137 faldo:begin ?pfsb138 ;
faldo:end ?pfse139 ;
up:ligand ?ligand140 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb138 faldo:position ?thisPositionOn141 ;
rdf:type faldo:ExactPosition .
?pfse139 faldo:position ?thisPositionOn142 ;
rdf:type faldo:ExactPosition .
?ligand140 rdfs:subClassOf chebi:61717 .
?pfs143 up:annotation ?annotation144 .
?annotation144 faldo:begin ?pfsb145 ;
faldo:end ?pfse146 ;
up:ligand ?ligand147 ;
rdf:type up:Binding_Site_Annotation .
?pfsb145 faldo:position ?thisPositionOn149 ;
rdf:type faldo:ExactPosition .
?pfse146 faldo:position ?thisPositionOn150 ;
rdf:type faldo:ExactPosition .
?ligand147 rdfs:subClassOf ?molecule148 .
?molecule148 rdfs:label 'substrate' .
?pfs151 up:annotation ?annotation152 .
?annotation152 faldo:begin ?pfsb153 ;
faldo:end ?pfse154 ;
up:ligand ?ligand155 ;
rdf:type up:Binding_Site_Annotation .
?pfsb153 faldo:position ?thisPositionOn157 ;
rdf:type faldo:ExactPosition .
?pfse154 faldo:position ?thisPositionOn158 ;
rdf:type faldo:ExactPosition .
?ligand155 rdfs:subClassOf ?molecule156 .
?molecule156 rdfs:label 'substrate' .
?pfs159 up:annotation ?annotation160 .
?annotation160 faldo:begin ?pfsb161 ;
faldo:end ?pfse162 ;
up:ligand ?ligand163 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb161 faldo:position ?thisPositionOn164 ;
rdf:type faldo:ExactPosition .
?pfse162 faldo:position ?thisPositionOn165 ;
rdf:type faldo:ExactPosition .
?ligand163 rdfs:subClassOf chebi:61717 .
?pfs166 up:annotation ?annotation167 .
?annotation167 faldo:begin ?pfsb168 ;
faldo:end ?pfse169 ;
up:ligand ?ligand170 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb168 faldo:position ?thisPositionOn171 ;
rdf:type faldo:ExactPosition .
?pfse169 faldo:position ?thisPositionOn172 ;
rdf:type faldo:ExactPosition .
?ligand170 rdfs:subClassOf chebi:61717 .
?pfs173 up:annotation ?annotation174 .
?annotation174 faldo:begin ?pfsb175 ;
faldo:end ?pfse176 ;
up:ligand ?ligand177 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb175 faldo:position ?thisPositionOn178 ;
rdf:type faldo:ExactPosition .
?pfse176 faldo:position ?thisPositionOn179 ;
rdf:type faldo:ExactPosition .
?ligand177 rdfs:subClassOf chebi:61717 .
?pfs180 up:annotation ?annotation181 .
?annotation181 faldo:begin ?pfsb182 ;
faldo:end ?pfse183 ;
up:ligand ?ligand184 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb182 faldo:position ?thisPositionOn185 ;
rdf:type faldo:ExactPosition .
?pfse183 faldo:position ?thisPositionOn186 ;
rdf:type faldo:ExactPosition .
?ligand184 rdfs:subClassOf chebi:61717 .
?pfs187 up:annotation ?annotation188 .
?annotation188 faldo:begin ?pfsb189 ;
faldo:end ?pfse190 ;
up:ligand ?ligand191 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb189 faldo:position ?thisPositionOn192 ;
rdf:type faldo:ExactPosition .
?pfse190 faldo:position ?thisPositionOn193 ;
rdf:type faldo:ExactPosition .
?ligand191 rdfs:subClassOf chebi:61717 .
?pfs194 up:annotation ?annotation195 .
?annotation195 faldo:begin ?pfsb196 ;
faldo:end ?pfse197 ;
up:ligand ?ligand198 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb196 faldo:position ?thisPositionOn199 ;
rdf:type faldo:ExactPosition .
?pfse197 faldo:position ?thisPositionOn200 ;
rdf:type faldo:ExactPosition .
?ligand198 rdfs:subClassOf chebi:61717 .
?pfs201 up:annotation ?annotation202 .
?annotation202 faldo:begin ?pfsb203 ;
faldo:end ?pfse204 ;
up:ligand ?ligand205 ;
rdf:type up:Binding_Site_Annotation .
?pfsb203 faldo:position ?thisPositionOn207 ;
rdf:type faldo:ExactPosition .
?pfse204 faldo:position ?thisPositionOn208 ;
rdf:type faldo:ExactPosition .
?ligand205 rdfs:subClassOf ?molecule206 .
?molecule206 rdfs:label 'substrate' .
?pfs209 up:annotation ?annotation210 .
?annotation210 faldo:begin ?pfsb211 ;
faldo:end ?pfse212 ;
up:ligand ?ligand213 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb211 faldo:position ?thisPositionOn214 ;
rdf:type faldo:ExactPosition .
?pfse212 faldo:position ?thisPositionOn215 ;
rdf:type faldo:ExactPosition .
?ligand213 rdfs:subClassOf chebi:61717 .
?pfs216 up:annotation ?annotation217 .
?annotation217 faldo:begin ?pfsb218 ;
faldo:end ?pfse219 ;
up:ligand ?ligand220 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb218 faldo:position ?thisPositionOn221 ;
rdf:type faldo:ExactPosition .
?pfse219 faldo:position ?thisPositionOn222 ;
rdf:type faldo:ExactPosition .
?ligand220 rdfs:subClassOf chebi:61717 .
?pfs223 up:annotation ?annotation224 .
?annotation224 faldo:begin ?pfsb225 ;
faldo:end ?pfse226 ;
up:ligand ?ligand227 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb225 faldo:position ?thisPositionOn228 ;
rdf:type faldo:ExactPosition .
?pfse226 faldo:position ?thisPositionOn229 ;
rdf:type faldo:ExactPosition .
?ligand227 rdfs:subClassOf chebi:61717 .
?pfs230 up:annotation ?annotation231 .
?annotation231 faldo:begin ?pfsb232 ;
faldo:end ?pfse233 ;
up:ligand ?ligand234 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb232 faldo:position ?thisPositionOn235 ;
rdf:type faldo:ExactPosition .
?pfse233 faldo:position ?thisPositionOn236 ;
rdf:type faldo:ExactPosition .
?ligand234 rdfs:subClassOf chebi:61717 .
?pfs237 up:annotation ?annotation238 .
?annotation238 faldo:begin ?pfsb239 ;
faldo:end ?pfse240 ;
up:ligand ?ligand241 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb239 faldo:position ?thisPositionOn242 ;
rdf:type faldo:ExactPosition .
?pfse240 faldo:position ?thisPositionOn243 ;
rdf:type faldo:ExactPosition .
?ligand241 rdfs:subClassOf chebi:61717 .
?pfs244 up:annotation ?annotation245 .
?annotation245 faldo:begin ?pfsb246 ;
faldo:end ?pfse247 ;
up:ligand ?ligand248 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb246 faldo:position ?thisPositionOn249 ;
rdf:type faldo:ExactPosition .
?pfse247 faldo:position ?thisPositionOn250 ;
rdf:type faldo:ExactPosition .
?ligand248 rdfs:subClassOf chebi:61717 .
?pfs251 up:annotation ?annotation252 .
?annotation252 faldo:begin ?pfsb253 ;
faldo:end ?pfse254 ;
up:ligand ?ligand255 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb253 faldo:position ?thisPositionOn256 ;
rdf:type faldo:ExactPosition .
?pfse254 faldo:position ?thisPositionOn257 ;
rdf:type faldo:ExactPosition .
?ligand255 rdfs:subClassOf chebi:61717 .
?pfs258 up:annotation ?annotation259 .
?annotation259 faldo:begin ?pfsb260 ;
faldo:end ?pfse261 ;
up:ligand ?ligand262 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'covalent' .
?pfsb260 faldo:position ?thisPositionOn263 ;
rdf:type faldo:ExactPosition .
?pfse261 faldo:position ?thisPositionOn264 ;
rdf:type faldo:ExactPosition .
?ligand262 rdfs:subClassOf chebi:61717 .
?sam265 up:classifiedWith keyword:732 .
?signal266 faldo:begin ?signalb267 ;
faldo:end ?signale268 .
?signalb267 faldo:position ?signalbp269 .
?signale268 faldo:position ?signalep270 .
?keyword271 up:range ?signal266 .
_:712927 a rdf:Statement ;
up:attribution _:712865 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:712928 a rdf:Statement ;
up:attribution _:712866 ;
rdf:subject ?this ;
rdf:predicate up:precursor ;
rdf:object "true"^^xsd:boolean .
_:712929 a rdf:Statement ;
up:attribution _:712867 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation1 .
_:712930 a rdf:Statement ;
up:attribution _:712868 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:712931 a rdf:Statement ;
up:attribution _:712869 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:712932 a rdf:Statement ;
up:attribution _:712870 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:712933 a rdf:Statement ;
up:attribution _:712871 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:712934 a rdf:Statement ;
up:attribution _:712872 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:712935 a rdf:Statement ;
up:attribution _:712873 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:712936 a rdf:Statement ;
up:attribution _:712874 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:186 .
_:712937 a rdf:Statement ;
up:attribution _:712875 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:249 .
_:712938 a rdf:Statement ;
up:attribution _:712876 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:349 .
_:712939 a rdf:Statement ;
up:attribution _:712877 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:408 .
_:712940 a rdf:Statement ;
up:attribution _:712878 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:712941 a rdf:Statement ;
up:attribution _:712879 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:560 .
_:712942 a rdf:Statement ;
up:attribution _:712880 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:574 .
_:712943 a rdf:Statement ;
up:attribution _:712881 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:732 .
_:712944 a rdf:Statement ;
up:attribution _:712882 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:763 .
_:712945 a rdf:Statement ;
up:attribution _:712883 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:813 .
_:712946 a rdf:Statement ;
up:attribution _:712884 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005507 .
_:712947 a rdf:Statement ;
up:attribution _:712885 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0020037 .
_:712948 a rdf:Statement ;
up:attribution _:712886 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005506 .
_:712949 a rdf:Statement ;
up:attribution _:712887 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016002 .
_:712950 a rdf:Statement ;
up:attribution _:712888 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0070814 .
_:712951 a rdf:Statement ;
up:attribution _:712889 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0042597 .
_:712952 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:712953 a rdf:Statement ;
up:attribution _:712890 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:712954 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs17 ;
rdf:predicate up:annotation ;
rdf:object ?annotation18 .
_:712955 a rdf:Statement ;
up:attribution _:712891 ;
rdf:subject ?pfs17 ;
rdf:predicate up:annotation ;
rdf:object ?annotation18 .
_:712956 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs24 ;
rdf:predicate up:annotation ;
rdf:object ?annotation25 .
_:712957 a rdf:Statement ;
up:attribution _:712892 ;
rdf:subject ?pfs24 ;
rdf:predicate up:annotation ;
rdf:object ?annotation25 .
_:712958 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs31 ;
rdf:predicate up:annotation ;
rdf:object ?annotation32 .
_:712959 a rdf:Statement ;
up:attribution _:712893 ;
rdf:subject ?pfs31 ;
rdf:predicate up:annotation ;
rdf:object ?annotation32 .
_:712960 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs38 ;
rdf:predicate up:annotation ;
rdf:object ?annotation39 .
_:712961 a rdf:Statement ;
up:attribution _:712894 ;
rdf:subject ?pfs38 ;
rdf:predicate up:annotation ;
rdf:object ?annotation39 .
_:712962 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs45 ;
rdf:predicate up:annotation ;
rdf:object ?annotation46 .
_:712963 a rdf:Statement ;
up:attribution _:712895 ;
rdf:subject ?pfs45 ;
rdf:predicate up:annotation ;
rdf:object ?annotation46 .
_:712964 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs52 ;
rdf:predicate up:annotation ;
rdf:object ?annotation53 .
_:712965 a rdf:Statement ;
up:attribution _:712896 ;
rdf:subject ?pfs52 ;
rdf:predicate up:annotation ;
rdf:object ?annotation53 .
_:712966 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs59 ;
rdf:predicate up:annotation ;
rdf:object ?annotation60 .
_:712967 a rdf:Statement ;
up:attribution _:712897 ;
rdf:subject ?pfs59 ;
rdf:predicate up:annotation ;
rdf:object ?annotation60 .
_:712968 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs66 ;
rdf:predicate up:annotation ;
rdf:object ?annotation67 .
_:712969 a rdf:Statement ;
up:attribution _:712898 ;
rdf:subject ?pfs66 ;
rdf:predicate up:annotation ;
rdf:object ?annotation67 .
_:712970 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs73 ;
rdf:predicate up:annotation ;
rdf:object ?annotation74 .
_:712971 a rdf:Statement ;
up:attribution _:712899 ;
rdf:subject ?pfs73 ;
rdf:predicate up:annotation ;
rdf:object ?annotation74 .
_:712972 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs80 ;
rdf:predicate up:annotation ;
rdf:object ?annotation81 .
_:712973 a rdf:Statement ;
up:attribution _:712900 ;
rdf:subject ?pfs80 ;
rdf:predicate up:annotation ;
rdf:object ?annotation81 .
_:712974 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs87 ;
rdf:predicate up:annotation ;
rdf:object ?annotation88 .
_:712975 a rdf:Statement ;
up:attribution _:712901 ;
rdf:subject ?pfs87 ;
rdf:predicate up:annotation ;
rdf:object ?annotation88 .
_:712976 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs94 ;
rdf:predicate up:annotation ;
rdf:object ?annotation95 .
_:712977 a rdf:Statement ;
up:attribution _:712902 ;
rdf:subject ?pfs94 ;
rdf:predicate up:annotation ;
rdf:object ?annotation95 .
_:712978 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs101 ;
rdf:predicate up:annotation ;
rdf:object ?annotation102 .
_:712979 a rdf:Statement ;
up:attribution _:712903 ;
rdf:subject ?pfs101 ;
rdf:predicate up:annotation ;
rdf:object ?annotation102 .
_:712980 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation109 .
_:712981 a rdf:Statement ;
up:attribution _:712904 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation109 .
_:712982 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs115 ;
rdf:predicate up:annotation ;
rdf:object ?annotation116 .
_:712983 a rdf:Statement ;
up:attribution _:712905 ;
rdf:subject ?pfs115 ;
rdf:predicate up:annotation ;
rdf:object ?annotation116 .
_:712984 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs122 ;
rdf:predicate up:annotation ;
rdf:object ?annotation123 .
_:712985 a rdf:Statement ;
up:attribution _:712906 ;
rdf:subject ?pfs122 ;
rdf:predicate up:annotation ;
rdf:object ?annotation123 .
_:712986 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs129 ;
rdf:predicate up:annotation ;
rdf:object ?annotation130 .
_:712987 a rdf:Statement ;
up:attribution _:712907 ;
rdf:subject ?pfs129 ;
rdf:predicate up:annotation ;
rdf:object ?annotation130 .
_:712988 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs136 ;
rdf:predicate up:annotation ;
rdf:object ?annotation137 .
_:712989 a rdf:Statement ;
up:attribution _:712908 ;
rdf:subject ?pfs136 ;
rdf:predicate up:annotation ;
rdf:object ?annotation137 .
_:712990 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs143 ;
rdf:predicate up:annotation ;
rdf:object ?annotation144 .
_:712991 a rdf:Statement ;
up:attribution _:712909 ;
rdf:subject ?pfs143 ;
rdf:predicate up:annotation ;
rdf:object ?annotation144 .
_:712992 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs151 ;
rdf:predicate up:annotation ;
rdf:object ?annotation152 .
_:712993 a rdf:Statement ;
up:attribution _:712910 ;
rdf:subject ?pfs151 ;
rdf:predicate up:annotation ;
rdf:object ?annotation152 .
_:712994 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs159 ;
rdf:predicate up:annotation ;
rdf:object ?annotation160 .
_:712995 a rdf:Statement ;
up:attribution _:712911 ;
rdf:subject ?pfs159 ;
rdf:predicate up:annotation ;
rdf:object ?annotation160 .
_:712996 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs166 ;
rdf:predicate up:annotation ;
rdf:object ?annotation167 .
_:712997 a rdf:Statement ;
up:attribution _:712912 ;
rdf:subject ?pfs166 ;
rdf:predicate up:annotation ;
rdf:object ?annotation167 .
_:712998 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs173 ;
rdf:predicate up:annotation ;
rdf:object ?annotation174 .
_:712999 a rdf:Statement ;
up:attribution _:712913 ;
rdf:subject ?pfs173 ;
rdf:predicate up:annotation ;
rdf:object ?annotation174 .
_:713000 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs180 ;
rdf:predicate up:annotation ;
rdf:object ?annotation181 .
_:713001 a rdf:Statement ;
up:attribution _:712914 ;
rdf:subject ?pfs180 ;
rdf:predicate up:annotation ;
rdf:object ?annotation181 .
_:713002 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs187 ;
rdf:predicate up:annotation ;
rdf:object ?annotation188 .
_:713003 a rdf:Statement ;
up:attribution _:712915 ;
rdf:subject ?pfs187 ;
rdf:predicate up:annotation ;
rdf:object ?annotation188 .
_:713004 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs194 ;
rdf:predicate up:annotation ;
rdf:object ?annotation195 .
_:713005 a rdf:Statement ;
up:attribution _:712916 ;
rdf:subject ?pfs194 ;
rdf:predicate up:annotation ;
rdf:object ?annotation195 .
_:713006 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs201 ;
rdf:predicate up:annotation ;
rdf:object ?annotation202 .
_:713007 a rdf:Statement ;
up:attribution _:712917 ;
rdf:subject ?pfs201 ;
rdf:predicate up:annotation ;
rdf:object ?annotation202 .
_:713008 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs209 ;
rdf:predicate up:annotation ;
rdf:object ?annotation210 .
_:713009 a rdf:Statement ;
up:attribution _:712918 ;
rdf:subject ?pfs209 ;
rdf:predicate up:annotation ;
rdf:object ?annotation210 .
_:713010 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs216 ;
rdf:predicate up:annotation ;
rdf:object ?annotation217 .
_:713011 a rdf:Statement ;
up:attribution _:712919 ;
rdf:subject ?pfs216 ;
rdf:predicate up:annotation ;
rdf:object ?annotation217 .
_:713012 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs223 ;
rdf:predicate up:annotation ;
rdf:object ?annotation224 .
_:713013 a rdf:Statement ;
up:attribution _:712920 ;
rdf:subject ?pfs223 ;
rdf:predicate up:annotation ;
rdf:object ?annotation224 .
_:713014 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs230 ;
rdf:predicate up:annotation ;
rdf:object ?annotation231 .
_:713015 a rdf:Statement ;
up:attribution _:712921 ;
rdf:subject ?pfs230 ;
rdf:predicate up:annotation ;
rdf:object ?annotation231 .
_:713016 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs237 ;
rdf:predicate up:annotation ;
rdf:object ?annotation238 .
_:713017 a rdf:Statement ;
up:attribution _:712922 ;
rdf:subject ?pfs237 ;
rdf:predicate up:annotation ;
rdf:object ?annotation238 .
_:713018 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs244 ;
rdf:predicate up:annotation ;
rdf:object ?annotation245 .
_:713019 a rdf:Statement ;
up:attribution _:712923 ;
rdf:subject ?pfs244 ;
rdf:predicate up:annotation ;
rdf:object ?annotation245 .
_:713020 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs251 ;
rdf:predicate up:annotation ;
rdf:object ?annotation252 .
_:713021 a rdf:Statement ;
up:attribution _:712924 ;
rdf:subject ?pfs251 ;
rdf:predicate up:annotation ;
rdf:object ?annotation252 .
_:713022 a rdf:Statement ;
up:source unirule:MF_02023 ;
rdf:subject ?pfs258 ;
rdf:predicate up:annotation ;
rdf:object ?annotation259 .
_:713023 a rdf:Statement ;
up:attribution _:712925 ;
rdf:subject ?pfs258 ;
rdf:predicate up:annotation ;
rdf:object ?annotation259 .
_:713024 a rdf:Statement ;
up:attribution _:712926 ;
rdf:subject ?sam265 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:732 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_02023
#Rule MF_02023 Created by:? on:2015-04-01 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_02023 .
?thisOrganism rdfs:subClassOf+ taxon:1224 .
BIND(URI(CONCAT(STR(?this), '#MF_02023a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a1')) AS ?annotation1) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a9')) AS ?annotation9) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch276 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8277 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8279 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023272 .
?templateMotifSequenceMatchRegionQ7MSJ8277 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8278 .
?templateMotifSequenceMatchBeginQ7MSJ8278 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8273 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8279 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch280 faldo:location ?targetMotifMatchRegionMatch281 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023283 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023274 .
?targetMotifMatchRegionMatch281 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023282 .
?targetMotifMatchRegionMatchBeginMF_02023282 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023275 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023283 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023272, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023272) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023272, CONCAT('^(?:-*[^-]){', STR(((159 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8273) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1284) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023274, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023274) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023274, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1284), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023274, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023274) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023274, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1284), '}'), '')))), '[^-]', ''))) AS ?step2285) .
BIND(((?step2285 + ?targetMotifMatchRegionMatchBeginPositionMF_02023275) - 1) AS ?thisPositionOn15) .
BIND(?thisPositionOn15 AS ?thisPositionOn16) .
BIND(?this AS ?pfs1t286) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a11')) AS ?annotation11) .
BIND(?this AS ?pfs10) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch291 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8292 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8294 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023287 .
?templateMotifSequenceMatchRegionQ7MSJ8292 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8293 .
?templateMotifSequenceMatchBeginQ7MSJ8293 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8288 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8294 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch295 faldo:location ?targetMotifMatchRegionMatch296 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023298 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023289 .
?targetMotifMatchRegionMatch296 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023297 .
?targetMotifMatchRegionMatchBeginMF_02023297 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023290 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023298 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023287, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023287) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023287, CONCAT('^(?:-*[^-]){', STR(((171 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8288) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1299) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023289, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023289) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023289, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1299), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023289, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023289) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023289, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1299), '}'), '')))), '[^-]', ''))) AS ?step2300) .
BIND(((?step2300 + ?targetMotifMatchRegionMatchBeginPositionMF_02023290) - 1) AS ?thisPositionOn22) .
BIND(?thisPositionOn22 AS ?thisPositionOn23) .
BIND(?this AS ?pfs1t301) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a18')) AS ?annotation18) .
BIND(?this AS ?pfs17) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch306 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8307 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8309 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023302 .
?templateMotifSequenceMatchRegionQ7MSJ8307 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8308 .
?templateMotifSequenceMatchBeginQ7MSJ8308 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8303 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8309 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch310 faldo:location ?targetMotifMatchRegionMatch311 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023313 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023304 .
?targetMotifMatchRegionMatch311 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023312 .
?targetMotifMatchRegionMatchBeginMF_02023312 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023305 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023313 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023302, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023302) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023302, CONCAT('^(?:-*[^-]){', STR(((318 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8303) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1314) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023304, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023304) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023304, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1314), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023304, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023304) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023304, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1314), '}'), '')))), '[^-]', ''))) AS ?step2315) .
BIND(((?step2315 + ?targetMotifMatchRegionMatchBeginPositionMF_02023305) - 1) AS ?thisPositionOn29) .
BIND(?thisPositionOn29 AS ?thisPositionOn30) .
BIND(?this AS ?pfs1t316) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfsb26) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfse27) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn29, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a25')) AS ?annotation25) .
BIND(?this AS ?pfs24) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch321 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8322 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8324 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023317 .
?templateMotifSequenceMatchRegionQ7MSJ8322 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8323 .
?templateMotifSequenceMatchBeginQ7MSJ8323 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8318 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8324 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch325 faldo:location ?targetMotifMatchRegionMatch326 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023328 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023319 .
?targetMotifMatchRegionMatch326 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023327 .
?targetMotifMatchRegionMatchBeginMF_02023327 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023320 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023328 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023317, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023317) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023317, CONCAT('^(?:-*[^-]){', STR(((355 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8318) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1329) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023319, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023319) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023319, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1329), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023319, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023319) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023319, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1329), '}'), '')))), '[^-]', ''))) AS ?step2330) .
BIND(((?step2330 + ?targetMotifMatchRegionMatchBeginPositionMF_02023320) - 1) AS ?thisPositionOn36) .
BIND(?thisPositionOn36 AS ?thisPositionOn37) .
BIND(?this AS ?pfs1t331) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfsb33) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfse34) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn36, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a32')) AS ?annotation32) .
BIND(?this AS ?pfs31) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch336 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8337 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8339 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023332 .
?templateMotifSequenceMatchRegionQ7MSJ8337 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8338 .
?templateMotifSequenceMatchBeginQ7MSJ8338 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8333 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8339 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch340 faldo:location ?targetMotifMatchRegionMatch341 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023343 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023334 .
?targetMotifMatchRegionMatch341 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023342 .
?targetMotifMatchRegionMatchBeginMF_02023342 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023335 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023343 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023332, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023332) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023332, CONCAT('^(?:-*[^-]){', STR(((360 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8333) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1344) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023334, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023334) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023334, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1344), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023334, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023334) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023334, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1344), '}'), '')))), '[^-]', ''))) AS ?step2345) .
BIND(((?step2345 + ?targetMotifMatchRegionMatchBeginPositionMF_02023335) - 1) AS ?thisPositionOn43) .
BIND(?thisPositionOn43 AS ?thisPositionOn44) .
BIND(?this AS ?pfs1t346) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfsb40) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfse41) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn43, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a39')) AS ?annotation39) .
BIND(?this AS ?pfs38) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch351 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8352 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8354 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023347 .
?templateMotifSequenceMatchRegionQ7MSJ8352 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8353 .
?templateMotifSequenceMatchBeginQ7MSJ8353 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8348 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8354 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch355 faldo:location ?targetMotifMatchRegionMatch356 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023358 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023349 .
?targetMotifMatchRegionMatch356 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023357 .
?targetMotifMatchRegionMatchBeginMF_02023357 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023350 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023358 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023347, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023347) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023347, CONCAT('^(?:-*[^-]){', STR(((376 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8348) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1359) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023349, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023349) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023349, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1359), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023349, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023349) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023349, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1359), '}'), '')))), '[^-]', ''))) AS ?step2360) .
BIND(((?step2360 + ?targetMotifMatchRegionMatchBeginPositionMF_02023350) - 1) AS ?thisPositionOn50) .
BIND(?thisPositionOn50 AS ?thisPositionOn51) .
BIND(?this AS ?pfs1t361) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfsb47) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfse48) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn50, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a46')) AS ?annotation46) .
BIND(?this AS ?pfs45) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch366 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8367 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8369 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023362 .
?templateMotifSequenceMatchRegionQ7MSJ8367 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8368 .
?templateMotifSequenceMatchBeginQ7MSJ8368 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8363 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8369 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch370 faldo:location ?targetMotifMatchRegionMatch371 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023373 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023364 .
?targetMotifMatchRegionMatch371 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023372 .
?targetMotifMatchRegionMatchBeginMF_02023372 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023365 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023373 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023362, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023362) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023362, CONCAT('^(?:-*[^-]){', STR(((411 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8363) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1374) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023364, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023364) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023364, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1374), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023364, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023364) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023364, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1374), '}'), '')))), '[^-]', ''))) AS ?step2375) .
BIND(((?step2375 + ?targetMotifMatchRegionMatchBeginPositionMF_02023365) - 1) AS ?thisPositionOn57) .
BIND(?thisPositionOn57 AS ?thisPositionOn58) .
BIND(?this AS ?pfs1t376) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfsb54) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfse55) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn57, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a53')) AS ?annotation53) .
BIND(?this AS ?pfs52) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch381 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8382 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8384 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023377 .
?templateMotifSequenceMatchRegionQ7MSJ8382 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8383 .
?templateMotifSequenceMatchBeginQ7MSJ8383 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8378 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8384 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch385 faldo:location ?targetMotifMatchRegionMatch386 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023388 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023379 .
?targetMotifMatchRegionMatch386 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023387 .
?targetMotifMatchRegionMatchBeginMF_02023387 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023380 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023388 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023377, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023377) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023377, CONCAT('^(?:-*[^-]){', STR(((423 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8378) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1389) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023379, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023379) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023379, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1389), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023379, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023379) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023379, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1389), '}'), '')))), '[^-]', ''))) AS ?step2390) .
BIND(((?step2390 + ?targetMotifMatchRegionMatchBeginPositionMF_02023380) - 1) AS ?thisPositionOn64) .
BIND(?thisPositionOn64 AS ?thisPositionOn65) .
BIND(?this AS ?pfs1t391) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfsb61) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfse62) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn64, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a60')) AS ?annotation60) .
BIND(?this AS ?pfs59) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch396 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8397 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8399 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023392 .
?templateMotifSequenceMatchRegionQ7MSJ8397 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8398 .
?templateMotifSequenceMatchBeginQ7MSJ8398 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8393 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8399 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch400 faldo:location ?targetMotifMatchRegionMatch401 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023403 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023394 .
?targetMotifMatchRegionMatch401 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023402 .
?targetMotifMatchRegionMatchBeginMF_02023402 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023395 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023403 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023392, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023392) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023392, CONCAT('^(?:-*[^-]){', STR(((434 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8393) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1404) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023394, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023394) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023394, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1404), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023394, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023394) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023394, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1404), '}'), '')))), '[^-]', ''))) AS ?step2405) .
BIND(((?step2405 + ?targetMotifMatchRegionMatchBeginPositionMF_02023395) - 1) AS ?thisPositionOn71) .
BIND(?thisPositionOn71 AS ?thisPositionOn72) .
BIND(?this AS ?pfs1t406) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfsb68) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn72))) AS ?pfse69) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn71, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a67')) AS ?annotation67) .
BIND(?this AS ?pfs66) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch411 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8412 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8414 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023407 .
?templateMotifSequenceMatchRegionQ7MSJ8412 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8413 .
?templateMotifSequenceMatchBeginQ7MSJ8413 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8408 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8414 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch415 faldo:location ?targetMotifMatchRegionMatch416 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023418 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023409 .
?targetMotifMatchRegionMatch416 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023417 .
?targetMotifMatchRegionMatchBeginMF_02023417 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023410 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023418 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023407, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023407) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023407, CONCAT('^(?:-*[^-]){', STR(((437 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8408) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1419) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023409, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023409) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023409, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1419), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023409, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023409) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023409, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1419), '}'), '')))), '[^-]', ''))) AS ?step2420) .
BIND(((?step2420 + ?targetMotifMatchRegionMatchBeginPositionMF_02023410) - 1) AS ?thisPositionOn78) .
BIND(?thisPositionOn78 AS ?thisPositionOn79) .
BIND(?this AS ?pfs1t421) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfsb75) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn79))) AS ?pfse76) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn78, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a74')) AS ?annotation74) .
BIND(?this AS ?pfs73) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch426 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8427 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8429 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023422 .
?templateMotifSequenceMatchRegionQ7MSJ8427 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8428 .
?templateMotifSequenceMatchBeginQ7MSJ8428 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8423 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8429 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch430 faldo:location ?targetMotifMatchRegionMatch431 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023433 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023424 .
?targetMotifMatchRegionMatch431 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023432 .
?targetMotifMatchRegionMatchBeginMF_02023432 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023425 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023433 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023422, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023422) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023422, CONCAT('^(?:-*[^-]){', STR(((478 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8423) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1434) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023424, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023424) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023424, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1434), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023424, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023424) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023424, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1434), '}'), '')))), '[^-]', ''))) AS ?step2435) .
BIND(((?step2435 + ?targetMotifMatchRegionMatchBeginPositionMF_02023425) - 1) AS ?thisPositionOn85) .
BIND(?thisPositionOn85 AS ?thisPositionOn86) .
BIND(?this AS ?pfs1t436) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfsb82) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn86))) AS ?pfse83) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn85, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a81')) AS ?annotation81) .
BIND(?this AS ?pfs80) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch441 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8442 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8444 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023437 .
?templateMotifSequenceMatchRegionQ7MSJ8442 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8443 .
?templateMotifSequenceMatchBeginQ7MSJ8443 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8438 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8444 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch445 faldo:location ?targetMotifMatchRegionMatch446 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023448 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023439 .
?targetMotifMatchRegionMatch446 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023447 .
?targetMotifMatchRegionMatchBeginMF_02023447 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023440 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023448 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023437, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023437) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023437, CONCAT('^(?:-*[^-]){', STR(((491 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8438) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1449) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023439, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023439) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023439, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1449), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023439, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023439) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023439, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1449), '}'), '')))), '[^-]', ''))) AS ?step2450) .
BIND(((?step2450 + ?targetMotifMatchRegionMatchBeginPositionMF_02023440) - 1) AS ?thisPositionOn92) .
BIND(?thisPositionOn92 AS ?thisPositionOn93) .
BIND(?this AS ?pfs1t451) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfsb89) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn93))) AS ?pfse90) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn92, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a88')) AS ?annotation88) .
BIND(?this AS ?pfs87) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch456 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8457 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8459 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023452 .
?templateMotifSequenceMatchRegionQ7MSJ8457 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8458 .
?templateMotifSequenceMatchBeginQ7MSJ8458 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8453 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8459 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch460 faldo:location ?targetMotifMatchRegionMatch461 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023463 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023454 .
?targetMotifMatchRegionMatch461 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023462 .
?targetMotifMatchRegionMatchBeginMF_02023462 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023455 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023463 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023452, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023452) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023452, CONCAT('^(?:-*[^-]){', STR(((500 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8453) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1464) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023454, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023454) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023454, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1464), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023454, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023454) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023454, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1464), '}'), '')))), '[^-]', ''))) AS ?step2465) .
BIND(((?step2465 + ?targetMotifMatchRegionMatchBeginPositionMF_02023455) - 1) AS ?thisPositionOn99) .
BIND(?thisPositionOn99 AS ?thisPositionOn100) .
BIND(?this AS ?pfs1t466) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn99))) AS ?pfsb96) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn100))) AS ?pfse97) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn99, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a95')) AS ?annotation95) .
BIND(?this AS ?pfs94) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch471 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8472 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8474 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023467 .
?templateMotifSequenceMatchRegionQ7MSJ8472 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8473 .
?templateMotifSequenceMatchBeginQ7MSJ8473 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8468 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8474 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch475 faldo:location ?targetMotifMatchRegionMatch476 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023478 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023469 .
?targetMotifMatchRegionMatch476 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023477 .
?targetMotifMatchRegionMatchBeginMF_02023477 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023470 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023478 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023467, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023467) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023467, CONCAT('^(?:-*[^-]){', STR(((507 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8468) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1479) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023469, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023469) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023469, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1479), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023469, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023469) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023469, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1479), '}'), '')))), '[^-]', ''))) AS ?step2480) .
BIND(((?step2480 + ?targetMotifMatchRegionMatchBeginPositionMF_02023470) - 1) AS ?thisPositionOn106) .
BIND(?thisPositionOn106 AS ?thisPositionOn107) .
BIND(?this AS ?pfs1t481) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfsb103) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn107))) AS ?pfse104) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn106, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a102')) AS ?annotation102) .
BIND(?this AS ?pfs101) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch486 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8487 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8489 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023482 .
?templateMotifSequenceMatchRegionQ7MSJ8487 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8488 .
?templateMotifSequenceMatchBeginQ7MSJ8488 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8483 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8489 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch490 faldo:location ?targetMotifMatchRegionMatch491 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023493 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023484 .
?targetMotifMatchRegionMatch491 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023492 .
?targetMotifMatchRegionMatchBeginMF_02023492 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023485 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023493 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023482, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023482) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023482, CONCAT('^(?:-*[^-]){', STR(((528 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8483) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1494) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023484, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023484) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023484, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1494), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023484, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023484) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023484, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1494), '}'), '')))), '[^-]', ''))) AS ?step2495) .
BIND(((?step2495 + ?targetMotifMatchRegionMatchBeginPositionMF_02023485) - 1) AS ?thisPositionOn113) .
BIND(?thisPositionOn113 AS ?thisPositionOn114) .
BIND(?this AS ?pfs1t496) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfsb110) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn114))) AS ?pfse111) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn113, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a109')) AS ?annotation109) .
BIND(?this AS ?pfs108) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch501 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8502 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8504 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023497 .
?templateMotifSequenceMatchRegionQ7MSJ8502 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8503 .
?templateMotifSequenceMatchBeginQ7MSJ8503 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8498 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8504 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch505 faldo:location ?targetMotifMatchRegionMatch506 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023508 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023499 .
?targetMotifMatchRegionMatch506 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023507 .
?targetMotifMatchRegionMatchBeginMF_02023507 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023500 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023508 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023497, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023497) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023497, CONCAT('^(?:-*[^-]){', STR(((591 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8498) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1509) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023499, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023499) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023499, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1509), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023499, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023499) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023499, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1509), '}'), '')))), '[^-]', ''))) AS ?step2510) .
BIND(((?step2510 + ?targetMotifMatchRegionMatchBeginPositionMF_02023500) - 1) AS ?thisPositionOn120) .
BIND(?thisPositionOn120 AS ?thisPositionOn121) .
BIND(?this AS ?pfs1t511) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn120))) AS ?pfsb117) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn121))) AS ?pfse118) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn120, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a116')) AS ?annotation116) .
BIND(?this AS ?pfs115) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch516 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8517 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8519 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023512 .
?templateMotifSequenceMatchRegionQ7MSJ8517 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8518 .
?templateMotifSequenceMatchBeginQ7MSJ8518 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8513 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8519 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch520 faldo:location ?targetMotifMatchRegionMatch521 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023523 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023514 .
?targetMotifMatchRegionMatch521 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023522 .
?targetMotifMatchRegionMatchBeginMF_02023522 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023515 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023523 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023512, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023512) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023512, CONCAT('^(?:-*[^-]){', STR(((675 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8513) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1524) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023514, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023514) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1524), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023514, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023514) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1524), '}'), '')))), '[^-]', ''))) AS ?step2525) .
BIND(((?step2525 + ?targetMotifMatchRegionMatchBeginPositionMF_02023515) - 1) AS ?thisPositionOn127) .
BIND(?thisPositionOn127 AS ?thisPositionOn128) .
BIND(?this AS ?pfs1t526) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn127))) AS ?pfsb124) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn128))) AS ?pfse125) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn127, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a123')) AS ?annotation123) .
BIND(?this AS ?pfs122) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch531 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8532 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8534 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023527 .
?templateMotifSequenceMatchRegionQ7MSJ8532 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8533 .
?templateMotifSequenceMatchBeginQ7MSJ8533 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8528 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8534 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch535 faldo:location ?targetMotifMatchRegionMatch536 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023538 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023529 .
?targetMotifMatchRegionMatch536 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023537 .
?targetMotifMatchRegionMatchBeginMF_02023537 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023530 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023538 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023527, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023527) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023527, CONCAT('^(?:-*[^-]){', STR(((155 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8528) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1539) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023529, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023529) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023529, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1539), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023529, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023529) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023529, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1539), '}'), '')))), '[^-]', ''))) AS ?step2540) .
BIND(((?step2540 + ?targetMotifMatchRegionMatchBeginPositionMF_02023530) - 1) AS ?thisPositionOn134) .
BIND(?thisPositionOn134 AS ?thisPositionOn135) .
BIND(?this AS ?pfs1t541) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn134))) AS ?pfsb131) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn135))) AS ?pfse132) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn134, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a130')) AS ?annotation130) .
BIND(?this AS ?pfs129) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch546 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8547 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8549 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023542 .
?templateMotifSequenceMatchRegionQ7MSJ8547 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8548 .
?templateMotifSequenceMatchBeginQ7MSJ8548 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8543 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8549 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch550 faldo:location ?targetMotifMatchRegionMatch551 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023553 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023544 .
?targetMotifMatchRegionMatch551 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023552 .
?targetMotifMatchRegionMatchBeginMF_02023552 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023545 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023553 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023542, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023542) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023542, CONCAT('^(?:-*[^-]){', STR(((158 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8543) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1554) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023544, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023544) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023544, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1554), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023544, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023544) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023544, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1554), '}'), '')))), '[^-]', ''))) AS ?step2555) .
BIND(((?step2555 + ?targetMotifMatchRegionMatchBeginPositionMF_02023545) - 1) AS ?thisPositionOn141) .
BIND(?thisPositionOn141 AS ?thisPositionOn142) .
BIND(?this AS ?pfs1t556) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn141))) AS ?pfsb138) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn142))) AS ?pfse139) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn141, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a137')) AS ?annotation137) .
BIND(?this AS ?pfs136) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch561 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8562 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8564 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023557 .
?templateMotifSequenceMatchRegionQ7MSJ8562 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8563 .
?templateMotifSequenceMatchBeginQ7MSJ8563 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8558 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8564 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch565 faldo:location ?targetMotifMatchRegionMatch566 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023568 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023559 .
?targetMotifMatchRegionMatch566 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023567 .
?targetMotifMatchRegionMatchBeginMF_02023567 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023560 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023568 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023557, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023557) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023557, CONCAT('^(?:-*[^-]){', STR(((220 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8558) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1569) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023559, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023559) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023559, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1569), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023559, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023559) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023559, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1569), '}'), '')))), '[^-]', ''))) AS ?step2570) .
BIND(((?step2570 + ?targetMotifMatchRegionMatchBeginPositionMF_02023560) - 1) AS ?thisPositionOn149) .
BIND(?thisPositionOn149 AS ?thisPositionOn150) .
BIND(?this AS ?pfs1t571) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn149))) AS ?pfsb145) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn150))) AS ?pfse146) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn149, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a144')) AS ?annotation144) .
BIND(?this AS ?pfs143) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch576 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8577 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8579 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023572 .
?templateMotifSequenceMatchRegionQ7MSJ8577 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8578 .
?templateMotifSequenceMatchBeginQ7MSJ8578 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8573 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8579 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch580 faldo:location ?targetMotifMatchRegionMatch581 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023583 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023574 .
?targetMotifMatchRegionMatch581 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023582 .
?targetMotifMatchRegionMatchBeginMF_02023582 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023575 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023583 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023572, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023572) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023572, CONCAT('^(?:-*[^-]){', STR(((297 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8573) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1584) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023574, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023574) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023574, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1584), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023574, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023574) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023574, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1584), '}'), '')))), '[^-]', ''))) AS ?step2585) .
BIND(((?step2585 + ?targetMotifMatchRegionMatchBeginPositionMF_02023575) - 1) AS ?thisPositionOn157) .
BIND(?thisPositionOn157 AS ?thisPositionOn158) .
BIND(?this AS ?pfs1t586) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn157))) AS ?pfsb153) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn158))) AS ?pfse154) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn157, 1) = 'Y')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a152')) AS ?annotation152) .
BIND(?this AS ?pfs151) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch591 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8592 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8594 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023587 .
?templateMotifSequenceMatchRegionQ7MSJ8592 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8593 .
?templateMotifSequenceMatchBeginQ7MSJ8593 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8588 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8594 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch595 faldo:location ?targetMotifMatchRegionMatch596 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023598 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023589 .
?targetMotifMatchRegionMatch596 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023597 .
?targetMotifMatchRegionMatchBeginMF_02023597 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023590 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023598 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023587, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023587) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023587, CONCAT('^(?:-*[^-]){', STR(((314 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8588) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1599) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023589, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023589) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023589, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1599), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023589, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023589) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023589, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1599), '}'), '')))), '[^-]', ''))) AS ?step2600) .
BIND(((?step2600 + ?targetMotifMatchRegionMatchBeginPositionMF_02023590) - 1) AS ?thisPositionOn164) .
BIND(?thisPositionOn164 AS ?thisPositionOn165) .
BIND(?this AS ?pfs1t601) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn164))) AS ?pfsb161) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn165))) AS ?pfse162) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn164, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a160')) AS ?annotation160) .
BIND(?this AS ?pfs159) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch606 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8607 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8609 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023602 .
?templateMotifSequenceMatchRegionQ7MSJ8607 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8608 .
?templateMotifSequenceMatchBeginQ7MSJ8608 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8603 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8609 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch610 faldo:location ?targetMotifMatchRegionMatch611 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023613 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023604 .
?targetMotifMatchRegionMatch611 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023612 .
?targetMotifMatchRegionMatchBeginMF_02023612 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023605 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023613 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023602, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023602) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023602, CONCAT('^(?:-*[^-]){', STR(((317 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8603) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1614) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023604, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023604) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023604, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1614), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023604, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023604) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023604, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1614), '}'), '')))), '[^-]', ''))) AS ?step2615) .
BIND(((?step2615 + ?targetMotifMatchRegionMatchBeginPositionMF_02023605) - 1) AS ?thisPositionOn171) .
BIND(?thisPositionOn171 AS ?thisPositionOn172) .
BIND(?this AS ?pfs1t616) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn171))) AS ?pfsb168) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn172))) AS ?pfse169) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn171, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a167')) AS ?annotation167) .
BIND(?this AS ?pfs166) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch621 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8622 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8624 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023617 .
?templateMotifSequenceMatchRegionQ7MSJ8622 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8623 .
?templateMotifSequenceMatchBeginQ7MSJ8623 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8618 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8624 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch625 faldo:location ?targetMotifMatchRegionMatch626 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023628 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023619 .
?targetMotifMatchRegionMatch626 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023627 .
?targetMotifMatchRegionMatchBeginMF_02023627 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023620 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023628 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023617, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023617) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023617, CONCAT('^(?:-*[^-]){', STR(((351 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8618) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1629) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023619, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023619) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023619, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1629), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023619, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023619) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023619, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1629), '}'), '')))), '[^-]', ''))) AS ?step2630) .
BIND(((?step2630 + ?targetMotifMatchRegionMatchBeginPositionMF_02023620) - 1) AS ?thisPositionOn178) .
BIND(?thisPositionOn178 AS ?thisPositionOn179) .
BIND(?this AS ?pfs1t631) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn178))) AS ?pfsb175) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn179))) AS ?pfse176) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn178, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a174')) AS ?annotation174) .
BIND(?this AS ?pfs173) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch636 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8637 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8639 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023632 .
?templateMotifSequenceMatchRegionQ7MSJ8637 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8638 .
?templateMotifSequenceMatchBeginQ7MSJ8638 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8633 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8639 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch640 faldo:location ?targetMotifMatchRegionMatch641 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023643 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023634 .
?targetMotifMatchRegionMatch641 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023642 .
?targetMotifMatchRegionMatchBeginMF_02023642 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023635 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023643 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023632, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023632) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023632, CONCAT('^(?:-*[^-]){', STR(((354 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8633) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1644) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023634, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023634) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023634, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1644), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023634, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023634) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023634, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1644), '}'), '')))), '[^-]', ''))) AS ?step2645) .
BIND(((?step2645 + ?targetMotifMatchRegionMatchBeginPositionMF_02023635) - 1) AS ?thisPositionOn185) .
BIND(?thisPositionOn185 AS ?thisPositionOn186) .
BIND(?this AS ?pfs1t646) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn185))) AS ?pfsb182) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn186))) AS ?pfse183) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn185, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a181')) AS ?annotation181) .
BIND(?this AS ?pfs180) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch651 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8652 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8654 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023647 .
?templateMotifSequenceMatchRegionQ7MSJ8652 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8653 .
?templateMotifSequenceMatchBeginQ7MSJ8653 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8648 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8654 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch655 faldo:location ?targetMotifMatchRegionMatch656 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023658 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023649 .
?targetMotifMatchRegionMatch656 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023657 .
?targetMotifMatchRegionMatchBeginMF_02023657 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023650 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023658 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023647, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023647) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023647, CONCAT('^(?:-*[^-]){', STR(((372 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8648) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1659) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023649, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023649) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023649, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1659), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023649, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023649) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023649, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1659), '}'), '')))), '[^-]', ''))) AS ?step2660) .
BIND(((?step2660 + ?targetMotifMatchRegionMatchBeginPositionMF_02023650) - 1) AS ?thisPositionOn192) .
BIND(?thisPositionOn192 AS ?thisPositionOn193) .
BIND(?this AS ?pfs1t661) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn192))) AS ?pfsb189) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn193))) AS ?pfse190) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn192, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a188')) AS ?annotation188) .
BIND(?this AS ?pfs187) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch666 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8667 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8669 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023662 .
?templateMotifSequenceMatchRegionQ7MSJ8667 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8668 .
?templateMotifSequenceMatchBeginQ7MSJ8668 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8663 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8669 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch670 faldo:location ?targetMotifMatchRegionMatch671 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023673 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023664 .
?targetMotifMatchRegionMatch671 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023672 .
?targetMotifMatchRegionMatchBeginMF_02023672 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023665 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023673 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023662, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023662) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023662, CONCAT('^(?:-*[^-]){', STR(((375 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8663) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1674) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023664, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023664) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023664, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1674), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023664, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023664) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023664, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1674), '}'), '')))), '[^-]', ''))) AS ?step2675) .
BIND(((?step2675 + ?targetMotifMatchRegionMatchBeginPositionMF_02023665) - 1) AS ?thisPositionOn199) .
BIND(?thisPositionOn199 AS ?thisPositionOn200) .
BIND(?this AS ?pfs1t676) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn199))) AS ?pfsb196) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn200))) AS ?pfse197) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn199, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a195')) AS ?annotation195) .
BIND(?this AS ?pfs194) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch681 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8682 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8684 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023677 .
?templateMotifSequenceMatchRegionQ7MSJ8682 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8683 .
?templateMotifSequenceMatchBeginQ7MSJ8683 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8678 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8684 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch685 faldo:location ?targetMotifMatchRegionMatch686 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023688 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023679 .
?targetMotifMatchRegionMatch686 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023687 .
?targetMotifMatchRegionMatchBeginMF_02023687 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023680 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023688 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023677, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023677) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023677, CONCAT('^(?:-*[^-]){', STR(((378 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8678) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1689) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023679, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023679) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023679, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1689), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023679, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023679) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023679, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1689), '}'), '')))), '[^-]', ''))) AS ?step2690) .
BIND(((?step2690 + ?targetMotifMatchRegionMatchBeginPositionMF_02023680) - 1) AS ?thisPositionOn207) .
BIND(?thisPositionOn207 AS ?thisPositionOn208) .
BIND(?this AS ?pfs1t691) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn207))) AS ?pfsb203) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn208))) AS ?pfse204) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn207, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a202')) AS ?annotation202) .
BIND(?this AS ?pfs201) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch696 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8697 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8699 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023692 .
?templateMotifSequenceMatchRegionQ7MSJ8697 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8698 .
?templateMotifSequenceMatchBeginQ7MSJ8698 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8693 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8699 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch700 faldo:location ?targetMotifMatchRegionMatch701 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023703 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023694 .
?targetMotifMatchRegionMatch701 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023702 .
?targetMotifMatchRegionMatchBeginMF_02023702 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023695 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023703 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023692, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023692) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023692, CONCAT('^(?:-*[^-]){', STR(((430 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8693) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1704) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023694, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023694) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023694, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1704), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023694, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023694) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023694, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1704), '}'), '')))), '[^-]', ''))) AS ?step2705) .
BIND(((?step2705 + ?targetMotifMatchRegionMatchBeginPositionMF_02023695) - 1) AS ?thisPositionOn214) .
BIND(?thisPositionOn214 AS ?thisPositionOn215) .
BIND(?this AS ?pfs1t706) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn214))) AS ?pfsb211) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn215))) AS ?pfse212) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn214, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a210')) AS ?annotation210) .
BIND(?this AS ?pfs209) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch711 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8712 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8714 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023707 .
?templateMotifSequenceMatchRegionQ7MSJ8712 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8713 .
?templateMotifSequenceMatchBeginQ7MSJ8713 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8708 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8714 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch715 faldo:location ?targetMotifMatchRegionMatch716 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023718 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023709 .
?targetMotifMatchRegionMatch716 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023717 .
?targetMotifMatchRegionMatchBeginMF_02023717 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023710 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023718 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023707, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023707) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023707, CONCAT('^(?:-*[^-]){', STR(((433 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8708) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1719) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023709, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023709) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023709, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1719), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023709, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023709) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023709, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1719), '}'), '')))), '[^-]', ''))) AS ?step2720) .
BIND(((?step2720 + ?targetMotifMatchRegionMatchBeginPositionMF_02023710) - 1) AS ?thisPositionOn221) .
BIND(?thisPositionOn221 AS ?thisPositionOn222) .
BIND(?this AS ?pfs1t721) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn221))) AS ?pfsb218) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn222))) AS ?pfse219) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn221, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a217')) AS ?annotation217) .
BIND(?this AS ?pfs216) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch726 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8727 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8729 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023722 .
?templateMotifSequenceMatchRegionQ7MSJ8727 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8728 .
?templateMotifSequenceMatchBeginQ7MSJ8728 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8723 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8729 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch730 faldo:location ?targetMotifMatchRegionMatch731 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023733 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023724 .
?targetMotifMatchRegionMatch731 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023732 .
?targetMotifMatchRegionMatchBeginMF_02023732 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023725 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023733 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023722, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023722) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023722, CONCAT('^(?:-*[^-]){', STR(((474 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8723) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1734) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023724, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023724) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023724, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1734), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023724, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023724) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023724, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1734), '}'), '')))), '[^-]', ''))) AS ?step2735) .
BIND(((?step2735 + ?targetMotifMatchRegionMatchBeginPositionMF_02023725) - 1) AS ?thisPositionOn228) .
BIND(?thisPositionOn228 AS ?thisPositionOn229) .
BIND(?this AS ?pfs1t736) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn228))) AS ?pfsb225) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn229))) AS ?pfse226) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn228, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a224')) AS ?annotation224) .
BIND(?this AS ?pfs223) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch741 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8742 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8744 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023737 .
?templateMotifSequenceMatchRegionQ7MSJ8742 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8743 .
?templateMotifSequenceMatchBeginQ7MSJ8743 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8738 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8744 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch745 faldo:location ?targetMotifMatchRegionMatch746 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023748 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023739 .
?targetMotifMatchRegionMatch746 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023747 .
?targetMotifMatchRegionMatchBeginMF_02023747 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023740 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023748 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023737, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023737) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023737, CONCAT('^(?:-*[^-]){', STR(((477 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8738) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1749) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023739, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023739) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023739, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1749), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023739, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023739) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023739, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1749), '}'), '')))), '[^-]', ''))) AS ?step2750) .
BIND(((?step2750 + ?targetMotifMatchRegionMatchBeginPositionMF_02023740) - 1) AS ?thisPositionOn235) .
BIND(?thisPositionOn235 AS ?thisPositionOn236) .
BIND(?this AS ?pfs1t751) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn235))) AS ?pfsb232) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn236))) AS ?pfse233) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn235, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a231')) AS ?annotation231) .
BIND(?this AS ?pfs230) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch756 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8757 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8759 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023752 .
?templateMotifSequenceMatchRegionQ7MSJ8757 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8758 .
?templateMotifSequenceMatchBeginQ7MSJ8758 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8753 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8759 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch760 faldo:location ?targetMotifMatchRegionMatch761 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023763 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023754 .
?targetMotifMatchRegionMatch761 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023762 .
?targetMotifMatchRegionMatchBeginMF_02023762 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023755 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023763 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023752, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023752) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023752, CONCAT('^(?:-*[^-]){', STR(((496 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8753) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1764) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023754, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023754) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023754, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1764), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023754, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023754) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023754, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1764), '}'), '')))), '[^-]', ''))) AS ?step2765) .
BIND(((?step2765 + ?targetMotifMatchRegionMatchBeginPositionMF_02023755) - 1) AS ?thisPositionOn242) .
BIND(?thisPositionOn242 AS ?thisPositionOn243) .
BIND(?this AS ?pfs1t766) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn242))) AS ?pfsb239) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn243))) AS ?pfse240) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn242, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a238')) AS ?annotation238) .
BIND(?this AS ?pfs237) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch771 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8772 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8774 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023767 .
?templateMotifSequenceMatchRegionQ7MSJ8772 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8773 .
?templateMotifSequenceMatchBeginQ7MSJ8773 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8768 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8774 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch775 faldo:location ?targetMotifMatchRegionMatch776 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023778 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023769 .
?targetMotifMatchRegionMatch776 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023777 .
?targetMotifMatchRegionMatchBeginMF_02023777 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023770 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023778 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023767, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023767) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023767, CONCAT('^(?:-*[^-]){', STR(((499 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8768) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1779) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023769, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023769) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023769, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1779), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023769, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023769) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023769, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1779), '}'), '')))), '[^-]', ''))) AS ?step2780) .
BIND(((?step2780 + ?targetMotifMatchRegionMatchBeginPositionMF_02023770) - 1) AS ?thisPositionOn249) .
BIND(?thisPositionOn249 AS ?thisPositionOn250) .
BIND(?this AS ?pfs1t781) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn249))) AS ?pfsb246) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn250))) AS ?pfse247) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn249, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a245')) AS ?annotation245) .
BIND(?this AS ?pfs244) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch786 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8787 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8789 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023782 .
?templateMotifSequenceMatchRegionQ7MSJ8787 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8788 .
?templateMotifSequenceMatchBeginQ7MSJ8788 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8783 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8789 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch790 faldo:location ?targetMotifMatchRegionMatch791 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023793 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023784 .
?targetMotifMatchRegionMatch791 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023792 .
?targetMotifMatchRegionMatchBeginMF_02023792 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023785 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023793 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023782, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023782) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023782, CONCAT('^(?:-*[^-]){', STR(((574 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8783) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1794) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023784, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023784) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023784, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1794), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023784, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023784) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023784, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1794), '}'), '')))), '[^-]', ''))) AS ?step2795) .
BIND(((?step2795 + ?targetMotifMatchRegionMatchBeginPositionMF_02023785) - 1) AS ?thisPositionOn256) .
BIND(?thisPositionOn256 AS ?thisPositionOn257) .
BIND(?this AS ?pfs1t796) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn256))) AS ?pfsb253) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn257))) AS ?pfse254) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn256, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a252')) AS ?annotation252) .
BIND(?this AS ?pfs251) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch801 faldo:location ?templateMotifSequenceMatchRegionQ7MSJ8802 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7MSJ8804 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7MSJ8MF_02023797 .
?templateMotifSequenceMatchRegionQ7MSJ8802 faldo:begin ?templateMotifSequenceMatchBeginQ7MSJ8803 .
?templateMotifSequenceMatchBeginQ7MSJ8803 faldo:position ?templateMotifSequenceMatchBeginPositionQ7MSJ8798 ;
faldo:reference isoform:Q7MSJ8-1 .
?templateMotifSequenceProfileAlignmentOperationQ7MSJ8804 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
?targetMotifMatch805 faldo:location ?targetMotifMatchRegionMatch806 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02023808 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7MSJ8MF_02023799 .
?targetMotifMatchRegionMatch806 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02023807 .
?targetMotifMatchRegionMatchBeginMF_02023807 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02023800 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02023808 edam:has_input signature:MF_02023 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7MSJ8MF_02023797, 1, (STRLEN(?templateMotifCigarQ7MSJ8MF_02023797) - STRLEN(REPLACE(?templateMotifCigarQ7MSJ8MF_02023797, CONCAT('^(?:-*[^-]){', STR(((590 - ?templateMotifSequenceMatchBeginPositionQ7MSJ8798) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1809) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023799, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023799) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023799, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1809), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7MSJ8MF_02023799, 1, (STRLEN(?targetMotifMatchCigarQ7MSJ8MF_02023799) - STRLEN(REPLACE(?targetMotifMatchCigarQ7MSJ8MF_02023799, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1809), '}'), '')))), '[^-]', ''))) AS ?step2810) .
BIND(((?step2810 + ?targetMotifMatchRegionMatchBeginPositionMF_02023800) - 1) AS ?thisPositionOn263) .
BIND(?thisPositionOn263 AS ?thisPositionOn264) .
BIND(?this AS ?pfs1t811) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn263))) AS ?pfsb260) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn264))) AS ?pfse261) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn263, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_02023a259')) AS ?annotation259) .
BIND(?this AS ?pfs258) .
}
OPTIONAL {
?this up:annotation ?samsignal812 ;
up:sequence ?thisSequence .
?samsignal812 up:range ?samsignalr813 ;
rdf:type up:Signal_Peptide_Annotation .
?samsignalr813 faldo:begin ?samsignalb814 ;
faldo:end ?samsignale815 .
?samsignalb814 faldo:position ?samsignalbp816 ;
faldo:reference ?thisSequence .
?samsignale815 faldo:position ?samsignalep817 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam265) .
}
BIND(URI(CONCAT(STR(?this), '#MF_02023a271')) AS ?keyword271) .
}
"xsd:string |
