| http://purl.uniprot.org/unirules/MF_00090#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00090#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_00090#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00090#construct-template-16 |
| http://purl.uniprot.org/unirules/MF_00090#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00090#construct-template-11 |
| http://purl.uniprot.org/unirules/MF_00090#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00090#construct-template-67 |
| http://purl.uniprot.org/unirules/MF_00090#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00090#construct-template-81 |
| http://purl.uniprot.org/unirules/MF_00090#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00090#construct-template-44 |
| http://purl.uniprot.org/unirules/MF_00090#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00090#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_00090#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00090#construct-template-68 |
| http://purl.uniprot.org/unirules/MF_00090#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00090#construct-template-66 |
| http://purl.uniprot.org/unirules/MF_00090#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00090#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00090#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00090#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00090#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00090#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:35278 up:source unirule:MF_00090 .
_:35279 up:source unirule:MF_00090 .
_:35280 up:source unirule:MF_00090 .
_:35281 up:source unirule:MF_00090 .
_:35282 up:source unirule:MF_00090 .
_:35283 up:source unirule:MF_00090 .
_:35284 up:source unirule:MF_00090 .
_:35285 up:source unirule:MF_00090 .
_:35286 up:source unirule:MF_00090 .
_:35287 up:source unirule:MF_00090 .
_:35288 up:source unirule:MF_00090 .
_:35289 up:source unirule:MF_00090 .
_:35290 up:source unirule:MF_00090 .
_:35291 up:source unirule:MF_00090 .
_:35292 up:source unirule:MF_00090 .
_:35293 up:source unirule:MF_00090 .
_:35294 up:source unirule:MF_00090 .
_:35295 up:source unirule:MF_00090 .
?this up:alternativeName ?name1 ,
?name2 ,
?name3 ;
up:annotation ?annotation5 ,
?annotation6 ,
?annotation8 ,
?annotation10 ;
up:classifiedWith GO:0004719 ,
GO:0005737 ,
GO:0030091 ,
GO:0036211 ,
keyword:489 ,
keyword:808 ,
keyword:949 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.1.1.77' ;
up:fullName 'Protein-L-isoaspartate O-methyltransferase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'L-isoaspartyl protein carboxyl methyltransferase' ;
rdf:type up:Structured_Name .
?name2 up:fullName 'Protein L-isoaspartyl methyltransferase' ;
rdf:type up:Structured_Name .
?name3 up:fullName 'Protein-beta-aspartate methyltransferase' ;
up:shortName 'PIMT' ;
rdf:type up:Structured_Name .
?gene4 skos:prefLabel 'pcm' .
?annotation5 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.' .
?annotation6 up:activity ?activity7 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity7 up:catalyticActivity ;
up:enzymeClass .
?annotation8 a up:Subcellular_Location_Annotation .
?annotation8li9 up:cellularComponent .
?annotation10 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.' .
?pfs11 up:annotation ?annotation12 .
?annotation12 faldo:begin ?pfsb13 ;
faldo:end ?pfse14 ;
rdf:type up:Active_Site_Annotation .
?pfsb13 faldo:position ?thisPositionOn15 ;
rdf:type faldo:ExactPosition .
?pfse14 faldo:position ?thisPositionOn16 ;
rdf:type faldo:ExactPosition .
_:35296 a rdf:Statement ;
up:attribution _:35278 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:35297 a rdf:Statement ;
up:attribution _:35279 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:35298 a rdf:Statement ;
up:attribution _:35280 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name2 .
_:35299 a rdf:Statement ;
up:attribution _:35281 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name3 .
_:35300 a rdf:Statement ;
up:attribution _:35282 ;
rdf:subject ?gene4 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene4 .
_:35301 a rdf:Statement ;
up:attribution _:35283 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:35302 a rdf:Statement ;
up:attribution _:35284 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:35303 a rdf:Statement ;
up:attribution _:35285 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:35304 a rdf:Statement ;
up:attribution _:35286 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:35305 a rdf:Statement ;
up:attribution _:35287 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:35306 a rdf:Statement ;
up:attribution _:35288 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:35307 a rdf:Statement ;
up:attribution _:35289 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:489 .
_:35308 a rdf:Statement ;
up:attribution _:35290 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:949 .
_:35309 a rdf:Statement ;
up:attribution _:35291 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0004719 .
_:35310 a rdf:Statement ;
up:attribution _:35292 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0036211 .
_:35311 a rdf:Statement ;
up:attribution _:35293 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0030091 .
_:35312 a rdf:Statement ;
up:attribution _:35294 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:35313 a rdf:Statement ;
up:source unirule:MF_00090 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation12 .
_:35314 a rdf:Statement ;
up:attribution _:35295 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation12 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00090
#Rule MF_00090 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01
VALUES ?supertaxon17 {taxon:2 taxon:2157}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00090 .
?thisOrganism rdfs:subClassOf+ ?supertaxon17 .
BIND(URI(CONCAT(STR(?this), '#MF_00090a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00090a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00090a2')) AS ?name2) .
BIND(URI(CONCAT(STR(?this), '#MF_00090a3')) AS ?name3) .
BIND(URI(CONCAT(STR(?this), '#MF_00090a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_00090a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_00090a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_00090a10')) AS ?annotation10) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch22 faldo:location ?templateMotifSequenceMatchRegionP0A7A523 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A7A525 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A7A5MF_0009018 .
?templateMotifSequenceMatchRegionP0A7A523 faldo:begin ?templateMotifSequenceMatchBeginP0A7A524 .
?templateMotifSequenceMatchBeginP0A7A524 faldo:position ?templateMotifSequenceMatchBeginPositionP0A7A519 ;
faldo:reference isoform:P0A7A5-1 .
?templateMotifSequenceProfileAlignmentOperationP0A7A525 edam:has_input signature:MF_00090 ;
rdf:type edam:operation_0300 .
?targetMotifMatch26 faldo:location ?targetMotifMatchRegionMatch27 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0009029 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A7A5MF_0009020 .
?targetMotifMatchRegionMatch27 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0009028 .
?targetMotifMatchRegionMatchBeginMF_0009028 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0009021 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0009029 edam:has_input signature:MF_00090 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A7A5MF_0009018, 1, (STRLEN(?templateMotifCigarP0A7A5MF_0009018) - STRLEN(REPLACE(?templateMotifCigarP0A7A5MF_0009018, CONCAT('^(?:-*[^-]){', STR(((59 - ?templateMotifSequenceMatchBeginPositionP0A7A519) + 1)), '}'), '')))), '[a-z]', '')) AS ?step130) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A7A5MF_0009020, 1, (STRLEN(?targetMotifMatchCigarP0A7A5MF_0009020) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7A5MF_0009020, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step130), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A7A5MF_0009020, 1, (STRLEN(?targetMotifMatchCigarP0A7A5MF_0009020) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7A5MF_0009020, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step130), '}'), '')))), '[^-]', ''))) AS ?step231) .
BIND(((?step231 + ?targetMotifMatchRegionMatchBeginPositionMF_0009021) - 1) AS ?thisPositionOn15) .
BIND(?thisPositionOn15 AS ?thisPositionOn16) .
BIND(?this AS ?pfs1t32) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb13) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse14) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, 1) = 'S')) .
BIND(URI(CONCAT(STR(?this), '#MF_00090a12')) AS ?annotation12) .
BIND(?this AS ?pfs11) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_00090 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00090#construct |
