| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-36 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-18 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-45 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-35 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-79 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-46 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-25 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-15 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-74 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-54 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-51 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-48 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-28 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-76 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-91 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-71 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-78 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-73 |
| http://purl.uniprot.org/unirules/MF_00268#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00268#construct-template-69 |
| http://purl.uniprot.org/unirules/MF_00268#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00268#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00268#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00268#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00268#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00268#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:109524 up:source unirule:MF_00268 .
_:109525 up:source unirule:MF_00268 .
_:109526 up:source unirule:MF_00268 .
_:109527 up:source unirule:MF_00268 .
_:109528 up:source unirule:MF_00268 .
_:109529 up:source unirule:MF_00268 .
_:109530 up:source unirule:MF_00268 .
_:109531 up:source unirule:MF_00268 .
_:109532 up:source unirule:MF_00268 .
_:109533 up:source unirule:MF_00268 .
_:109534 up:source unirule:MF_00268 .
_:109535 up:source unirule:MF_00268 .
_:109536 up:source unirule:MF_00268 .
_:109537 up:source unirule:MF_00268 .
_:109538 up:source unirule:MF_00268 .
_:109539 up:source unirule:MF_00268 .
_:109540 up:source unirule:MF_00268 .
_:109541 up:source unirule:MF_00268 .
_:109542 up:source unirule:MF_00268 .
_:109543 up:source unirule:MF_00268 .
_:109544 up:source unirule:MF_00268 .
_:109545 up:source unirule:MF_00268 .
_:109546 up:source unirule:MF_00268 .
_:109547 up:source unirule:MF_00268 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ;
up:classifiedWith GO:0003684 ,
GO:0003697 ,
GO:0005524 ,
GO:0005737 ,
GO:0006281 ,
GO:0006310 ,
GO:0006974 ,
GO:0008094 ,
GO:0009432 ,
keyword:227 ,
keyword:233 ,
keyword:234 ,
keyword:238 ,
keyword:547 ,
keyword:67 ,
keyword:742 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:fullName 'Protein RecA' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Recombinase A' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'recA' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.' .
?annotation4 a up:Subcellular_Location_Annotation .
?annotation4li5 up:cellularComponent .
?annotation6 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the RecA family.' .
?pfs7 up:annotation ?annotation8 .
?annotation8 faldo:begin ?pfsb9 ;
faldo:end ?pfse10 ;
up:ligand ?ligand11 ;
rdf:type up:Binding_Site_Annotation .
?pfsb9 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfse10 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?ligand11 rdfs:subClassOf chebi:30616 .
_:109548 a rdf:Statement ;
up:attribution _:109524 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:109549 a rdf:Statement ;
up:attribution _:109525 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:109550 a rdf:Statement ;
up:attribution _:109526 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:109551 a rdf:Statement ;
up:attribution _:109527 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:109552 a rdf:Statement ;
up:attribution _:109528 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:109553 a rdf:Statement ;
up:attribution _:109529 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:109554 a rdf:Statement ;
up:attribution _:109530 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:109555 a rdf:Statement ;
up:attribution _:109531 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:227 .
_:109556 a rdf:Statement ;
up:attribution _:109532 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:233 .
_:109557 a rdf:Statement ;
up:attribution _:109533 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:234 .
_:109558 a rdf:Statement ;
up:attribution _:109534 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:742 .
_:109559 a rdf:Statement ;
up:attribution _:109535 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:67 .
_:109560 a rdf:Statement ;
up:attribution _:109536 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:547 .
_:109561 a rdf:Statement ;
up:attribution _:109537 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:238 .
_:109562 a rdf:Statement ;
up:attribution _:109538 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005524 .
_:109563 a rdf:Statement ;
up:attribution _:109539 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0003684 .
_:109564 a rdf:Statement ;
up:attribution _:109540 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008094 .
_:109565 a rdf:Statement ;
up:attribution _:109541 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0003697 .
_:109566 a rdf:Statement ;
up:attribution _:109542 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006310 .
_:109567 a rdf:Statement ;
up:attribution _:109543 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006281 .
_:109568 a rdf:Statement ;
up:attribution _:109544 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006974 .
_:109569 a rdf:Statement ;
up:attribution _:109545 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0009432 .
_:109570 a rdf:Statement ;
up:attribution _:109546 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:109571 a rdf:Statement ;
up:source unirule:MF_00268 ;
rdf:subject ?pfs7 ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:109572 a rdf:Statement ;
up:attribution _:109547 ;
rdf:subject ?pfs7 ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00268
#Rule MF_00268 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00268 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00268a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00268a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00268a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00268a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00268a6')) AS ?annotation6) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch18 faldo:location ?templateMotifSequenceMatchRegionP0A7G619 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A7G621 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A7G6MF_0026814 .
?templateMotifSequenceMatchRegionP0A7G619 faldo:begin ?templateMotifSequenceMatchBeginP0A7G620 .
?templateMotifSequenceMatchBeginP0A7G620 faldo:position ?templateMotifSequenceMatchBeginPositionP0A7G615 ;
faldo:reference isoform:P0A7G6-1 .
?templateMotifSequenceProfileAlignmentOperationP0A7G621 edam:has_input signature:MF_00268 ;
rdf:type edam:operation_0300 .
?targetMotifMatch22 faldo:location ?targetMotifMatchRegionMatch23 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0026825 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A7G6MF_0026816 .
?targetMotifMatchRegionMatch23 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0026824 .
?targetMotifMatchRegionMatchBeginMF_0026824 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0026817 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0026825 edam:has_input signature:MF_00268 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A7G6MF_0026814, 1, (STRLEN(?templateMotifCigarP0A7G6MF_0026814) - STRLEN(REPLACE(?templateMotifCigarP0A7G6MF_0026814, CONCAT('^(?:-*[^-]){', STR(((67 - ?templateMotifSequenceMatchBeginPositionP0A7G615) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A7G6MF_0026816, 1, (STRLEN(?targetMotifMatchCigarP0A7G6MF_0026816) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7G6MF_0026816, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A7G6MF_0026816, 1, (STRLEN(?targetMotifMatchCigarP0A7G6MF_0026816) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7G6MF_0026816, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) .
BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0026817) - 1) AS ?thisPositionOn12) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A7G6MF_0026814, 1, (STRLEN(?templateMotifCigarP0A7G6MF_0026814) - STRLEN(REPLACE(?templateMotifCigarP0A7G6MF_0026814, CONCAT('^(?:-*[^-]){', STR(((74 - ?templateMotifSequenceMatchBeginPositionP0A7G615) + 1)), '}'), '')))), '[a-z]', '')) AS ?step128) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A7G6MF_0026816, 1, (STRLEN(?targetMotifMatchCigarP0A7G6MF_0026816) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7G6MF_0026816, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step128), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A7G6MF_0026816, 1, (STRLEN(?targetMotifMatchCigarP0A7G6MF_0026816) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7G6MF_0026816, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step128), '}'), '')))), '[^-]', ''))) AS ?step229) .
BIND(((?step229 + ?targetMotifMatchRegionMatchBeginPositionMF_0026817) - 1) AS ?thisPositionOn13) .
BIND(?this AS ?pfs1t30) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb9) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse10) .
FILTER (REGEX('G[ARNDCQEGHILKMFPSTWYVBZJUOX]ES[GS]GKT', SUBSTR(?thisSequenceValue, ?thisPositionOn12, (?thisPositionOn13 - ?thisPositionOn12)))) .
BIND(URI(CONCAT(STR(?this), '#MF_00268a8')) AS ?annotation8) .
BIND(?this AS ?pfs7) .
}
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_00268 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00268#construct |
