| http://purl.uniprot.org/unirules/MF_00376#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:149165 up:source unirule:MF_00376 .
_:149166 up:source unirule:MF_00376 .
_:149167 up:source unirule:MF_00376 .
_:149168 up:source unirule:MF_00376 .
_:149169 up:source unirule:MF_00376 .
_:149170 up:source unirule:MF_00376 .
_:149171 up:source unirule:MF_00376 .
_:149172 up:source unirule:MF_00376 .
_:149173 up:source unirule:MF_00376 .
_:149174 up:source unirule:MF_00376 .
_:149175 up:source unirule:MF_00376 .
_:149176 up:source unirule:MF_00376 .
_:149177 up:source unirule:MF_00376 .
_:149178 up:source unirule:MF_00376 .
_:149179 up:source unirule:MF_00376 .
_:149180 up:source unirule:MF_00376 .
_:149181 up:source unirule:MF_00376 .
_:149182 up:source unirule:MF_00376 .
_:149183 up:source unirule:MF_00376 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation7 ,
?annotation9 ;
up:classifiedWith GO:0004140 ,
GO:0005524 ,
GO:0005737 ,
GO:0015937 ,
keyword:173 ,
keyword:418 ,
keyword:547 ,
keyword:67 ,
keyword:808 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.7.1.24' ;
up:fullName 'Dephospho-CoA kinase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Dephosphocoenzyme A kinase' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'coaE' .
?annotation3 a up:Function_Annotation ;
rdfs:comment "Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A." .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 a up:Pathway_Annotation ;
rdfs:comment 'Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 5/5.' .
?annotation7 a up:Subcellular_Location_Annotation .
?annotation7li8 up:cellularComponent .
?annotation9 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the CoaE family.' .
?pfs10 up:annotation ?annotation11 .
?annotation11 faldo:begin ?pfsb12 ;
faldo:end ?pfse13 ;
up:ligand ?ligand14 ;
rdf:type up:Binding_Site_Annotation .
?pfsb12 faldo:position ?thisPositionOn15 ;
rdf:type faldo:ExactPosition .
?pfse13 faldo:position ?thisPositionOn16 ;
rdf:type faldo:ExactPosition .
?ligand14 rdfs:subClassOf chebi:30616 .
_:149184 a rdf:Statement ;
up:attribution _:149165 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:149185 a rdf:Statement ;
up:attribution _:149166 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:149186 a rdf:Statement ;
up:attribution _:149167 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:149187 a rdf:Statement ;
up:attribution _:149168 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:149188 a rdf:Statement ;
up:attribution _:149169 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:149189 a rdf:Statement ;
up:attribution _:149170 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:149190 a rdf:Statement ;
up:attribution _:149171 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:149191 a rdf:Statement ;
up:attribution _:149172 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:149192 a rdf:Statement ;
up:attribution _:149173 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:149193 a rdf:Statement ;
up:attribution _:149174 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:149194 a rdf:Statement ;
up:attribution _:149175 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:418 .
_:149195 a rdf:Statement ;
up:attribution _:149176 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:67 .
_:149196 a rdf:Statement ;
up:attribution _:149177 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:547 .
_:149197 a rdf:Statement ;
up:attribution _:149178 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:173 .
_:149198 a rdf:Statement ;
up:attribution _:149179 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005524 .
_:149199 a rdf:Statement ;
up:attribution _:149180 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0004140 .
_:149200 a rdf:Statement ;
up:attribution _:149181 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0015937 .
_:149201 a rdf:Statement ;
up:attribution _:149182 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:149202 a rdf:Statement ;
up:source unirule:MF_00376 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:149203 a rdf:Statement ;
up:attribution _:149183 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00376
#Rule MF_00376 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00376 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00376a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00376a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00376a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00376a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00376a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_00376a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_00376a9')) AS ?annotation9) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch21 faldo:location ?templateMotifSequenceMatchRegionP0A6I922 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6I924 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6I9MF_0037617 .
?templateMotifSequenceMatchRegionP0A6I922 faldo:begin ?templateMotifSequenceMatchBeginP0A6I923 .
?templateMotifSequenceMatchBeginP0A6I923 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6I918 ;
faldo:reference isoform:P0A6I9-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6I924 edam:has_input signature:MF_00376 ;
rdf:type edam:operation_0300 .
?targetMotifMatch25 faldo:location ?targetMotifMatchRegionMatch26 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0037628 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6I9MF_0037619 .
?targetMotifMatchRegionMatch26 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0037627 .
?targetMotifMatchRegionMatchBeginMF_0037627 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0037620 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0037628 edam:has_input signature:MF_00376 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6I9MF_0037617, 1, (STRLEN(?templateMotifCigarP0A6I9MF_0037617) - STRLEN(REPLACE(?templateMotifCigarP0A6I9MF_0037617, CONCAT('^(?:-*[^-]){', STR(((12 - ?templateMotifSequenceMatchBeginPositionP0A6I918) + 1)), '}'), '')))), '[a-z]', '')) AS ?step129) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6I9MF_0037619, 1, (STRLEN(?targetMotifMatchCigarP0A6I9MF_0037619) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6I9MF_0037619, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step129), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6I9MF_0037619, 1, (STRLEN(?targetMotifMatchCigarP0A6I9MF_0037619) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6I9MF_0037619, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step129), '}'), '')))), '[^-]', ''))) AS ?step230) .
BIND(((?step230 + ?targetMotifMatchRegionMatchBeginPositionMF_0037620) - 1) AS ?thisPositionOn15) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6I9MF_0037617, 1, (STRLEN(?templateMotifCigarP0A6I9MF_0037617) - STRLEN(REPLACE(?templateMotifCigarP0A6I9MF_0037617, CONCAT('^(?:-*[^-]){', STR(((17 - ?templateMotifSequenceMatchBeginPositionP0A6I918) + 1)), '}'), '')))), '[a-z]', '')) AS ?step131) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6I9MF_0037619, 1, (STRLEN(?targetMotifMatchCigarP0A6I9MF_0037619) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6I9MF_0037619, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step131), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6I9MF_0037619, 1, (STRLEN(?targetMotifMatchCigarP0A6I9MF_0037619) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6I9MF_0037619, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step131), '}'), '')))), '[^-]', ''))) AS ?step232) .
BIND(((?step232 + ?targetMotifMatchRegionMatchBeginPositionMF_0037620) - 1) AS ?thisPositionOn16) .
BIND(?this AS ?pfs1t33) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) .
FILTER (REGEX('[GASC][ARNDCQEGHILKMFPSTWYVBZJUOX]GK[STDN][ARNDCQEGHILKMFPSTWYVBZJUOX]', SUBSTR(?thisSequenceValue, ?thisPositionOn15, (?thisPositionOn16 - ?thisPositionOn15)))) .
BIND(URI(CONCAT(STR(?this), '#MF_00376a11')) AS ?annotation11) .
BIND(?this AS ?pfs10) .
}
}
"xsd:string |
