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http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-77
http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-78
http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-55
http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-86
http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-47
http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-66
http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-43
http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-58
http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-67
http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-41
http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-63
http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-84
http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-69
http://purl.uniprot.org/unirules/MF_00395#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00395#construct-template-65
http://purl.uniprot.org/unirules/MF_00395#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_00395#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_00395#construct-where-list-0
http://purl.uniprot.org/unirules/MF_00395#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00395#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00395#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:155664 up:source unirule:MF_00395 . _:155665 up:source unirule:MF_00395 . _:155666 up:source unirule:MF_00395 . _:155667 up:source unirule:MF_00395 . _:155668 up:source unirule:MF_00395 . _:155669 up:source unirule:MF_00395 . _:155670 up:source unirule:MF_00395 . _:155671 up:source unirule:MF_00395 . _:155672 up:source unirule:MF_00395 . _:155673 up:source unirule:MF_00395 . _:155674 up:source unirule:MF_00395 . _:155675 up:source unirule:MF_00395 . _:155676 up:source unirule:MF_00395 . _:155677 up:source unirule:MF_00395 . _:155678 up:source unirule:MF_00395 . _:155679 up:source unirule:MF_00395 . _:155680 up:source unirule:MF_00395 . _:155681 up:source unirule:MF_00395 . _:155682 up:source unirule:MF_00395 . _:155683 up:source unirule:MF_00395 . _:155684 up:source unirule:MF_00395 . _:155685 up:source unirule:MF_00395 . ?this up:alternativeName ?name1 , ?name2 ; up:annotation ?annotation4 , ?annotation5 , ?annotation6 ; up:classifiedWith GO:0009055 , GO:0017004 , keyword:1133 , keyword:249 , keyword:472 , keyword:602 , keyword:812 , keyword:813 ; up:recommendedName ?name0 . ?name0 up:fullName 'Cytochrome b6-f complex subunit 8' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Cytochrome b6-f complex subunit VIII' ; rdf:type up:Structured_Name . ?name2 up:fullName 'Cytochrome b6-f complex subunit PetN' ; rdf:type up:Structured_Name . ?gene3 skos:prefLabel 'petN' . ?annotation4 a up:Function_Annotation ; rdfs:comment 'Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.' . ?annotation5 a up:Subunit_Annotation ; rdfs:comment 'The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.' . ?annotation6 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the PetN family.' . ?case7 up:classifiedWith GO:0009535 . ?case8 up:classifiedWith keyword:1003 , keyword:997 . ?case9 up:classifiedWith keyword:793 . ?case10 up:classifiedWith GO:0005886 . ?case11 up:classifiedWith GO:0042651 . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . _:155686 a rdf:Statement ; up:attribution _:155664 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:155687 a rdf:Statement ; up:attribution _:155665 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:155688 a rdf:Statement ; up:attribution _:155666 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name2 . _:155689 a rdf:Statement ; up:attribution _:155667 ; rdf:subject ?gene3 ; rdf:predicate up:encodedBy ; rdf:object ?gene3 . _:155690 a rdf:Statement ; up:attribution _:155668 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:155691 a rdf:Statement ; up:attribution _:155669 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:155692 a rdf:Statement ; up:attribution _:155670 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:155693 a rdf:Statement ; up:attribution _:155671 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:813 . _:155694 a rdf:Statement ; up:attribution _:155672 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:249 . _:155695 a rdf:Statement ; up:attribution _:155673 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:602 . _:155696 a rdf:Statement ; up:attribution _:155674 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:155697 a rdf:Statement ; up:attribution _:155675 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:155698 a rdf:Statement ; up:attribution _:155676 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . _:155699 a rdf:Statement ; up:attribution _:155677 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009055 . _:155700 a rdf:Statement ; up:attribution _:155678 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0017004 . _:155701 a rdf:Statement ; up:attribution _:155679 ; rdf:subject ?case7 ; rdf:predicate up:classifiedWith ; rdf:object GO:0009535 . _:155702 a rdf:Statement ; up:attribution _:155680 ; rdf:subject ?case8 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1003 . _:155703 a rdf:Statement ; up:attribution _:155681 ; rdf:subject ?case8 ; rdf:predicate up:classifiedWith ; rdf:object keyword:997 . _:155704 a rdf:Statement ; up:attribution _:155682 ; rdf:subject ?case9 ; rdf:predicate up:classifiedWith ; rdf:object keyword:793 . _:155705 a rdf:Statement ; up:attribution _:155683 ; rdf:subject ?case10 ; rdf:predicate up:classifiedWith ; rdf:object GO:0005886 . _:155706 a rdf:Statement ; up:attribution _:155684 ; rdf:subject ?case11 ; rdf:predicate up:classifiedWith ; rdf:object GO:0042651 . _:155707 a rdf:Statement ; up:source unirule:MF_00395 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:155708 a rdf:Statement ; up:attribution _:155685 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00395 #Rule MF_00395 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-02-17 { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00395 . ?thisOrganism rdfs:subClassOf+ taxon:1117 . } UNION { ?this rdfs:seeAlso signature:MF_00395 . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } UNION { ?this up:encodedIn up:Cyanelle . } UNION { ?this up:encodedIn up:Apicoplast . } UNION { ?this up:encodedIn up:Organellar_chromatophore . } UNION { ?this up:encodedIn up:Non-photosynthetic_plastid . } } BIND(URI(CONCAT(STR(?this), '#MF_00395a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00395a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_00395a2')) AS ?name2) . BIND(URI(CONCAT(STR(?this), '#MF_00395a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_00395a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_00395a6')) AS ?annotation6) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch22 faldo:location ?templateMotifSequenceMatchRegionP7271723 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP7271725 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP72717MF_0039518 . ?templateMotifSequenceMatchRegionP7271723 faldo:begin ?templateMotifSequenceMatchBeginP7271724 . ?templateMotifSequenceMatchBeginP7271724 faldo:position ?templateMotifSequenceMatchBeginPositionP7271719 ; faldo:reference isoform:P72717-1 . ?templateMotifSequenceProfileAlignmentOperationP7271725 edam:has_input signature:MF_00395 ; rdf:type edam:operation_0300 . ?targetMotifMatch26 faldo:location ?targetMotifMatchRegionMatch27 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0039529 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP72717MF_0039520 . ?targetMotifMatchRegionMatch27 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0039528 . ?targetMotifMatchRegionMatchBeginMF_0039528 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0039521 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0039529 edam:has_input signature:MF_00395 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP72717MF_0039518, 1, (STRLEN(?templateMotifCigarP72717MF_0039518) - STRLEN(REPLACE(?templateMotifCigarP72717MF_0039518, CONCAT('^(?:-*[^-]){', STR(((3 - ?templateMotifSequenceMatchBeginPositionP7271719) + 1)), '}'), '')))), '[a-z]', '')) AS ?step130) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP72717MF_0039520, 1, (STRLEN(?targetMotifMatchCigarP72717MF_0039520) - STRLEN(REPLACE(?targetMotifMatchCigarP72717MF_0039520, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step130), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP72717MF_0039520, 1, (STRLEN(?targetMotifMatchCigarP72717MF_0039520) - STRLEN(REPLACE(?targetMotifMatchCigarP72717MF_0039520, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step130), '}'), '')))), '[^-]', ''))) AS ?step231) . BIND(((?step231 + ?targetMotifMatchRegionMatchBeginPositionMF_0039521) - 1) AS ?thisPositionOn16) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP72717MF_0039518, 1, (STRLEN(?templateMotifCigarP72717MF_0039518) - STRLEN(REPLACE(?templateMotifCigarP72717MF_0039518, CONCAT('^(?:-*[^-]){', STR(((23 - ?templateMotifSequenceMatchBeginPositionP7271719) + 1)), '}'), '')))), '[a-z]', '')) AS ?step132) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP72717MF_0039520, 1, (STRLEN(?targetMotifMatchCigarP72717MF_0039520) - STRLEN(REPLACE(?targetMotifMatchCigarP72717MF_0039520, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step132), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP72717MF_0039520, 1, (STRLEN(?targetMotifMatchCigarP72717MF_0039520) - STRLEN(REPLACE(?targetMotifMatchCigarP72717MF_0039520, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step132), '}'), '')))), '[^-]', ''))) AS ?step233) . BIND(((?step233 + ?targetMotifMatchRegionMatchBeginPositionMF_0039521) - 1) AS ?thisPositionOn17) . BIND(?this AS ?pfs1t34) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse15) . FILTER ((BOUND(?thisPositionOn16) && BOUND(?thisPositionOn17))) . BIND(URI(CONCAT(STR(?this), '#MF_00395a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this a up:Protein . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } BIND(?this AS ?case7) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:33071 . BIND(?this AS ?case8) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:33071 . })) . BIND(?this AS ?case9) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:33071 . FILTER (! (EXISTS { { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } })) . BIND(?this AS ?case10) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } })) . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:33071 . })) . BIND(?this AS ?case11) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_00395http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00395#construct
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