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http://purl.uniprot.org/unirules/MF_00396#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00396#construct-template-15
http://purl.uniprot.org/unirules/MF_00396#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00396#construct-template-77
http://purl.uniprot.org/unirules/MF_00396#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00396#construct-template-14
http://purl.uniprot.org/unirules/MF_00396#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00396#construct-template-81
http://purl.uniprot.org/unirules/MF_00396#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00396#construct-template-82
http://purl.uniprot.org/unirules/MF_00396#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00396#construct-template-80
http://purl.uniprot.org/unirules/MF_00396#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00396#construct-template-0
http://purl.uniprot.org/unirules/MF_00396#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00396#construct-template-73
http://purl.uniprot.org/unirules/MF_00396#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00396#construct-template-32
http://purl.uniprot.org/unirules/MF_00396#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00396#construct-template-71
http://purl.uniprot.org/unirules/MF_00396#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00396#construct-template-78
http://purl.uniprot.org/unirules/MF_00396#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_00396#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_00396#construct-where-list-0
http://purl.uniprot.org/unirules/MF_00396#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00396#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00396#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:156071 up:source unirule:MF_00396 . _:156072 up:source unirule:MF_00396 . _:156073 up:source unirule:MF_00396 . _:156074 up:source unirule:MF_00396 . _:156075 up:source unirule:MF_00396 . _:156076 up:source unirule:MF_00396 . _:156077 up:source unirule:MF_00396 . _:156078 up:source unirule:MF_00396 . _:156079 up:source unirule:MF_00396 . _:156080 up:source unirule:MF_00396 . _:156081 up:source unirule:MF_00396 . _:156082 up:source unirule:MF_00396 . _:156083 up:source unirule:MF_00396 . _:156084 up:source unirule:MF_00396 . _:156085 up:source unirule:MF_00396 . _:156086 up:source unirule:MF_00396 . _:156087 up:source unirule:MF_00396 . _:156088 up:source unirule:MF_00396 . _:156089 up:source unirule:MF_00396 . _:156090 up:source unirule:MF_00396 . _:156091 up:source unirule:MF_00396 . ?this up:alternativeName ?name1 , ?name2 ; up:annotation ?annotation4 , ?annotation5 , ?annotation6 ; up:classifiedWith GO:0009055 , keyword:1133 , keyword:249 , keyword:472 , keyword:602 , keyword:812 , keyword:813 ; up:recommendedName ?name0 . ?name0 up:fullName 'Cytochrome b6-f complex subunit 7' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Cytochrome b6-f complex subunit VII' ; rdf:type up:Structured_Name . ?name2 up:fullName 'Cytochrome b6-f complex subunit PetM' ; rdf:type up:Structured_Name . ?gene3 skos:prefLabel 'petM' . ?annotation4 a up:Function_Annotation ; rdfs:comment 'Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.' . ?annotation5 a up:Subunit_Annotation ; rdfs:comment 'The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.' . ?annotation6 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the PetM family.' . ?case7 up:classifiedWith GO:0009535 . ?case8 up:classifiedWith keyword:1003 , keyword:997 . ?case9 up:classifiedWith keyword:793 . ?case10 up:classifiedWith GO:0005886 . ?case11 up:classifiedWith GO:0042651 . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . _:156092 a rdf:Statement ; up:attribution _:156071 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:156093 a rdf:Statement ; up:attribution _:156072 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:156094 a rdf:Statement ; up:attribution _:156073 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name2 . _:156095 a rdf:Statement ; up:attribution _:156074 ; rdf:subject ?gene3 ; rdf:predicate up:encodedBy ; rdf:object ?gene3 . _:156096 a rdf:Statement ; up:attribution _:156075 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:156097 a rdf:Statement ; up:attribution _:156076 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:156098 a rdf:Statement ; up:attribution _:156077 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:156099 a rdf:Statement ; up:attribution _:156078 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:813 . _:156100 a rdf:Statement ; up:attribution _:156079 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:249 . _:156101 a rdf:Statement ; up:attribution _:156080 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:602 . _:156102 a rdf:Statement ; up:attribution _:156081 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:156103 a rdf:Statement ; up:attribution _:156082 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:156104 a rdf:Statement ; up:attribution _:156083 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . _:156105 a rdf:Statement ; up:attribution _:156084 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009055 . _:156106 a rdf:Statement ; up:attribution _:156085 ; rdf:subject ?case7 ; rdf:predicate up:classifiedWith ; rdf:object GO:0009535 . _:156107 a rdf:Statement ; up:attribution _:156086 ; rdf:subject ?case8 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1003 . _:156108 a rdf:Statement ; up:attribution _:156087 ; rdf:subject ?case8 ; rdf:predicate up:classifiedWith ; rdf:object keyword:997 . _:156109 a rdf:Statement ; up:attribution _:156088 ; rdf:subject ?case9 ; rdf:predicate up:classifiedWith ; rdf:object keyword:793 . _:156110 a rdf:Statement ; up:attribution _:156089 ; rdf:subject ?case10 ; rdf:predicate up:classifiedWith ; rdf:object GO:0005886 . _:156111 a rdf:Statement ; up:attribution _:156090 ; rdf:subject ?case11 ; rdf:predicate up:classifiedWith ; rdf:object GO:0042651 . _:156112 a rdf:Statement ; up:source unirule:MF_00396 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:156113 a rdf:Statement ; up:attribution _:156091 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00396 #Rule MF_00396 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-02-17 { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00396 . ?thisOrganism rdfs:subClassOf+ taxon:1117 . } UNION { ?this rdfs:seeAlso signature:MF_00396 . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } UNION { ?this up:encodedIn up:Cyanelle . } UNION { ?this up:encodedIn up:Apicoplast . } UNION { ?this up:encodedIn up:Organellar_chromatophore . } UNION { ?this up:encodedIn up:Non-photosynthetic_plastid . } } BIND(URI(CONCAT(STR(?this), '#MF_00396a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00396a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_00396a2')) AS ?name2) . BIND(URI(CONCAT(STR(?this), '#MF_00396a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_00396a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_00396a6')) AS ?annotation6) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch22 faldo:location ?templateMotifSequenceMatchRegionP7481023 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP7481025 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP74810MF_0039618 . ?templateMotifSequenceMatchRegionP7481023 faldo:begin ?templateMotifSequenceMatchBeginP7481024 . ?templateMotifSequenceMatchBeginP7481024 faldo:position ?templateMotifSequenceMatchBeginPositionP7481019 ; faldo:reference isoform:P74810-1 . ?templateMotifSequenceProfileAlignmentOperationP7481025 edam:has_input signature:MF_00396 ; rdf:type edam:operation_0300 . ?targetMotifMatch26 faldo:location ?targetMotifMatchRegionMatch27 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0039629 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP74810MF_0039620 . ?targetMotifMatchRegionMatch27 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0039628 . ?targetMotifMatchRegionMatchBeginMF_0039628 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0039621 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0039629 edam:has_input signature:MF_00396 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP74810MF_0039618, 1, (STRLEN(?templateMotifCigarP74810MF_0039618) - STRLEN(REPLACE(?templateMotifCigarP74810MF_0039618, CONCAT('^(?:-*[^-]){', STR(((11 - ?templateMotifSequenceMatchBeginPositionP7481019) + 1)), '}'), '')))), '[a-z]', '')) AS ?step130) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP74810MF_0039620, 1, (STRLEN(?targetMotifMatchCigarP74810MF_0039620) - STRLEN(REPLACE(?targetMotifMatchCigarP74810MF_0039620, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step130), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP74810MF_0039620, 1, (STRLEN(?targetMotifMatchCigarP74810MF_0039620) - STRLEN(REPLACE(?targetMotifMatchCigarP74810MF_0039620, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step130), '}'), '')))), '[^-]', ''))) AS ?step231) . BIND(((?step231 + ?targetMotifMatchRegionMatchBeginPositionMF_0039621) - 1) AS ?thisPositionOn16) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP74810MF_0039618, 1, (STRLEN(?templateMotifCigarP74810MF_0039618) - STRLEN(REPLACE(?templateMotifCigarP74810MF_0039618, CONCAT('^(?:-*[^-]){', STR(((29 - ?templateMotifSequenceMatchBeginPositionP7481019) + 1)), '}'), '')))), '[a-z]', '')) AS ?step132) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP74810MF_0039620, 1, (STRLEN(?targetMotifMatchCigarP74810MF_0039620) - STRLEN(REPLACE(?targetMotifMatchCigarP74810MF_0039620, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step132), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP74810MF_0039620, 1, (STRLEN(?targetMotifMatchCigarP74810MF_0039620) - STRLEN(REPLACE(?targetMotifMatchCigarP74810MF_0039620, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step132), '}'), '')))), '[^-]', ''))) AS ?step233) . BIND(((?step233 + ?targetMotifMatchRegionMatchBeginPositionMF_0039621) - 1) AS ?thisPositionOn17) . BIND(?this AS ?pfs1t34) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse15) . FILTER ((BOUND(?thisPositionOn16) && BOUND(?thisPositionOn17))) . BIND(URI(CONCAT(STR(?this), '#MF_00396a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this a up:Protein . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } BIND(?this AS ?case7) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:33071 . BIND(?this AS ?case8) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:33071 . })) . BIND(?this AS ?case9) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:33071 . FILTER (! (EXISTS { { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } })) . BIND(?this AS ?case10) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } })) . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:33071 . })) . BIND(?this AS ?case11) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_00396http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00396#construct
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