| http://purl.uniprot.org/unirules/MF_00484#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:194019 up:source unirule:MF_00484 .
_:194020 up:source unirule:MF_00484 .
_:194021 up:source unirule:MF_00484 .
_:194022 up:source unirule:MF_00484 .
_:194023 up:source unirule:MF_00484 .
_:194024 up:source unirule:MF_00484 .
_:194025 up:source unirule:MF_00484 .
_:194026 up:source unirule:MF_00484 .
_:194027 up:source unirule:MF_00484 .
_:194028 up:source unirule:MF_00484 .
_:194029 up:source unirule:MF_00484 .
_:194030 up:source unirule:MF_00484 .
_:194031 up:source unirule:MF_00484 .
_:194032 up:source unirule:MF_00484 .
_:194033 up:source unirule:MF_00484 .
?this up:annotation ?annotation1 ,
?annotation2 ,
?annotation4 ,
?annotation5 ;
up:classifiedWith GO:0005978 ,
GO:0009011 ,
keyword:320 ,
keyword:328 ,
keyword:808 .
?gene0 skos:prefLabel 'glgA' .
?annotation1 a up:Function_Annotation ;
rdfs:comment 'Synthesizes alpha-1,4-glucan chains using ADP-glucose.' .
?annotation2 up:activity ?activity3 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity3 up:catalyticActivity ;
up:enzymeClass .
?annotation4 a up:Pathway_Annotation ;
rdfs:comment 'Glycan biosynthesis; glycogen biosynthesis.' .
?annotation5 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.' .
?case6 up:alternativeName ?name8 ;
up:recommendedName ?name7 .
?name7 up:ecName '2.4.1.21' ;
up:fullName 'Probable glycogen synthase' ;
rdf:type up:Structured_Name .
?name8 up:fullName 'Starch [bacterial glycogen] synthase' ;
rdf:type up:Structured_Name .
?case9 up:alternativeName ?name11 ;
up:recommendedName ?name10 .
?name10 up:ecName '2.4.1.21' ;
up:fullName 'Glycogen synthase' ;
rdf:type up:Structured_Name .
?name11 up:fullName 'Starch [bacterial glycogen] synthase' ;
rdf:type up:Structured_Name .
?pfs12 up:annotation ?annotation13 .
?annotation13 faldo:begin ?pfsb14 ;
faldo:end ?pfse15 ;
up:ligand ?ligand16 ;
rdf:type up:Binding_Site_Annotation .
?pfsb14 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?pfse15 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?ligand16 rdfs:subClassOf chebi:57498 .
_:194034 a rdf:Statement ;
up:attribution _:194019 ;
rdf:subject ?gene0 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene0 .
_:194035 a rdf:Statement ;
up:attribution _:194020 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation1 .
_:194036 a rdf:Statement ;
up:attribution _:194021 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:194037 a rdf:Statement ;
up:attribution _:194022 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:194038 a rdf:Statement ;
up:attribution _:194023 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:194039 a rdf:Statement ;
up:attribution _:194024 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:320 .
_:194040 a rdf:Statement ;
up:attribution _:194025 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:194041 a rdf:Statement ;
up:attribution _:194026 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:328 .
_:194042 a rdf:Statement ;
up:attribution _:194027 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0009011 .
_:194043 a rdf:Statement ;
up:attribution _:194028 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005978 .
_:194044 a rdf:Statement ;
up:attribution _:194029 ;
rdf:subject ?case6 ;
rdf:predicate up:recommendedName ;
rdf:object ?name7 .
_:194045 a rdf:Statement ;
up:attribution _:194030 ;
rdf:subject ?case6 ;
rdf:predicate up:alternativeName ;
rdf:object ?name8 .
_:194046 a rdf:Statement ;
up:attribution _:194031 ;
rdf:subject ?case9 ;
rdf:predicate up:recommendedName ;
rdf:object ?name10 .
_:194047 a rdf:Statement ;
up:attribution _:194032 ;
rdf:subject ?case9 ;
rdf:predicate up:alternativeName ;
rdf:object ?name11 .
_:194048 a rdf:Statement ;
up:source unirule:MF_00484 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:194049 a rdf:Statement ;
up:attribution _:194033 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00484
#Rule MF_00484 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-03
VALUES ?supertaxon19 {taxon:2 taxon:2157}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00484 .
?thisOrganism rdfs:subClassOf+ ?supertaxon19 .
BIND(URI(CONCAT(STR(?this), '#MF_00484a1')) AS ?annotation1) .
BIND(URI(CONCAT(STR(?this), '#MF_00484a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_00484a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00484a5')) AS ?annotation5) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch24 faldo:location ?templateMotifSequenceMatchRegionP0A6U825 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6U827 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6U8MF_0048420 .
?templateMotifSequenceMatchRegionP0A6U825 faldo:begin ?templateMotifSequenceMatchBeginP0A6U826 .
?templateMotifSequenceMatchBeginP0A6U826 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6U821 ;
faldo:reference isoform:P0A6U8-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6U827 edam:has_input signature:MF_00484 ;
rdf:type edam:operation_0300 .
?targetMotifMatch28 faldo:location ?targetMotifMatchRegionMatch29 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0048431 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6U8MF_0048422 .
?targetMotifMatchRegionMatch29 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0048430 .
?targetMotifMatchRegionMatchBeginMF_0048430 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0048423 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0048431 edam:has_input signature:MF_00484 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6U8MF_0048420, 1, (STRLEN(?templateMotifCigarP0A6U8MF_0048420) - STRLEN(REPLACE(?templateMotifCigarP0A6U8MF_0048420, CONCAT('^(?:-*[^-]){', STR(((15 - ?templateMotifSequenceMatchBeginPositionP0A6U821) + 1)), '}'), '')))), '[a-z]', '')) AS ?step132) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6U8MF_0048422, 1, (STRLEN(?targetMotifMatchCigarP0A6U8MF_0048422) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6U8MF_0048422, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step132), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6U8MF_0048422, 1, (STRLEN(?targetMotifMatchCigarP0A6U8MF_0048422) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6U8MF_0048422, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step132), '}'), '')))), '[^-]', ''))) AS ?step233) .
BIND(((?step233 + ?targetMotifMatchRegionMatchBeginPositionMF_0048423) - 1) AS ?thisPositionOn17) .
BIND(?thisPositionOn17 AS ?thisPositionOn18) .
BIND(?this AS ?pfs1t34) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) .
FILTER (REGEX('[KR]', SUBSTR(?thisSequenceValue, ?thisPositionOn17, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_00484a13')) AS ?annotation13) .
BIND(?this AS ?pfs12) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:2157 .
BIND(?this AS ?case6) .
BIND(URI(CONCAT(STR(?this), '#MF_00484a7')) AS ?name7) .
BIND(URI(CONCAT(STR(?this), '#MF_00484a8')) AS ?name8) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(?this AS ?case9) .
BIND(URI(CONCAT(STR(?this), '#MF_00484a10')) AS ?name10) .
BIND(URI(CONCAT(STR(?this), '#MF_00484a11')) AS ?name11) .
}
}
"xsd:string |
