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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00657#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00657#construct-template-60 |
| http://purl.uniprot.org/unirules/MF_00657#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00657#construct-template-84 |
| http://purl.uniprot.org/unirules/MF_00657#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00657#construct-template-83 |
| http://purl.uniprot.org/unirules/MF_00657#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00657#construct-template-82 |
| http://purl.uniprot.org/unirules/MF_00657#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00657#construct-template-81 |
| http://purl.uniprot.org/unirules/MF_00657#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00657#construct-template-80 |
| http://purl.uniprot.org/unirules/MF_00657#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00657#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_00657#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00657#construct-template-58 |
| http://purl.uniprot.org/unirules/MF_00657#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00657#construct-template-57 |
| http://purl.uniprot.org/unirules/MF_00657#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00657#construct-template-56 |
| http://purl.uniprot.org/unirules/MF_00657#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00657#construct-template-79 |
| http://purl.uniprot.org/unirules/MF_00657#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00657#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_00657#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00657#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00657#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00657#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00657#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00657#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:249888 up:source unirule:MF_00657 . _:249889 up:source unirule:MF_00657 . _:249890 up:source unirule:MF_00657 . _:249891 up:source unirule:MF_00657 . _:249892 up:source unirule:MF_00657 . _:249893 up:source unirule:MF_00657 . _:249894 up:source unirule:MF_00657 . _:249895 up:source unirule:MF_00657 . _:249896 up:source unirule:MF_00657 . _:249897 up:source unirule:MF_00657 . _:249898 up:source unirule:MF_00657 . _:249899 up:source unirule:MF_00657 . _:249900 up:source unirule:MF_00657 . ?this up:classifiedWith GO:0016706 , keyword:223 , keyword:560 . ?case0 up:classifiedWith GO:0005506 , keyword:408 , keyword:479 , keyword:847 . ?case1 up:recommendedName ?name2 . ?name2 up:ecName '1.14.11.-' ; up:fullName 'PKHD-type hydroxylase YbiX' ; rdf:type up:Structured_Name . ?case3 up:recommendedName ?name4 . ?name4 up:ecName '1.14.11.-' ; up:fullName ?nameValue5 ; rdf:type up:Structured_Name . ?pfs6 up:annotation ?annotation7 , ?annotation13 , ?annotation19 . ?annotation7 faldo:begin ?pfsb8 ; faldo:end ?pfse9 ; up:ligand ?ligand10 ; rdf:type up:Binding_Site_Annotation . ?pfsb8 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?pfse9 faldo:position ?thisPositionOn12 ; rdf:type faldo:ExactPosition . ?ligand10 rdfs:subClassOf chebi:24875 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; up:ligand ?ligand16 ; rdf:type up:Binding_Site_Annotation . ?pfsb14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?ligand16 rdfs:subClassOf chebi:24875 . ?annotation19 faldo:begin ?pfsb20 ; faldo:end ?pfse21 ; up:ligand ?ligand22 ; rdf:type up:Binding_Site_Annotation . ?pfsb20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?pfse21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?ligand22 rdfs:subClassOf chebi:24875 . ?pfs25 up:annotation ?annotation26 . ?annotation26 faldo:begin ?pfsb27 ; faldo:end ?pfse28 ; up:ligand ?ligand29 ; rdf:type up:Binding_Site_Annotation . ?pfsb27 faldo:position ?thisPositionOn30 ; rdf:type faldo:ExactPosition . ?pfse28 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?ligand29 rdfs:subClassOf chebi:16810 . _:249901 a rdf:Statement ; up:attribution _:249888 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:560 . _:249902 a rdf:Statement ; up:attribution _:249889 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:223 . _:249903 a rdf:Statement ; up:attribution _:249890 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016706 . _:249904 a rdf:Statement ; up:attribution _:249891 ; rdf:subject ?case0 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:249905 a rdf:Statement ; up:attribution _:249892 ; rdf:subject ?case0 ; rdf:predicate up:classifiedWith ; rdf:object keyword:408 . _:249906 a rdf:Statement ; up:attribution _:249893 ; rdf:subject ?case0 ; rdf:predicate up:classifiedWith ; rdf:object keyword:847 . _:249907 a rdf:Statement ; up:attribution _:249894 ; rdf:subject ?case0 ; rdf:predicate up:classifiedWith ; rdf:object GO:0005506 . _:249908 a rdf:Statement ; up:attribution _:249895 ; rdf:subject ?case1 ; rdf:predicate up:recommendedName ; rdf:object ?name2 . _:249909 a rdf:Statement ; up:attribution _:249896 ; rdf:subject ?case3 ; rdf:predicate up:recommendedName ; rdf:object ?name4 . _:249910 a rdf:Statement ; up:source unirule:MF_00657 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:249911 a rdf:Statement ; up:attribution _:249897 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:249912 a rdf:Statement ; up:source unirule:MF_00657 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:249913 a rdf:Statement ; up:attribution _:249898 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:249914 a rdf:Statement ; up:source unirule:MF_00657 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:249915 a rdf:Statement ; up:attribution _:249899 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:249916 a rdf:Statement ; up:source unirule:MF_00657 ; rdf:subject ?pfs25 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:249917 a rdf:Statement ; up:attribution _:249900 ; rdf:subject ?pfs25 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00657 #Rule MF_00657 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-02-17 VALUES ?supertaxon32 {taxon:1117 taxon:1224} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00657 . ?thisOrganism rdfs:subClassOf+ ?supertaxon32 . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch37 faldo:location ?templateMotifSequenceMatchRegionP7577938 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP7577940 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP75779MF_0065733 . ?templateMotifSequenceMatchRegionP7577938 faldo:begin ?templateMotifSequenceMatchBeginP7577939 . ?templateMotifSequenceMatchBeginP7577939 faldo:position ?templateMotifSequenceMatchBeginPositionP7577934 ; faldo:reference isoform:P75779-1 . ?templateMotifSequenceProfileAlignmentOperationP7577940 edam:has_input signature:MF_00657 ; rdf:type edam:operation_0300 . ?targetMotifMatch41 faldo:location ?targetMotifMatchRegionMatch42 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0065744 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP75779MF_0065735 . ?targetMotifMatchRegionMatch42 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0065743 . ?targetMotifMatchRegionMatchBeginMF_0065743 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0065736 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0065744 edam:has_input signature:MF_00657 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP75779MF_0065733, 1, (STRLEN(?templateMotifCigarP75779MF_0065733) - STRLEN(REPLACE(?templateMotifCigarP75779MF_0065733, CONCAT('^(?:-*[^-]){', STR(((96 - ?templateMotifSequenceMatchBeginPositionP7577934) + 1)), '}'), '')))), '[a-z]', '')) AS ?step145) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP75779MF_0065735, 1, (STRLEN(?targetMotifMatchCigarP75779MF_0065735) - STRLEN(REPLACE(?targetMotifMatchCigarP75779MF_0065735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP75779MF_0065735, 1, (STRLEN(?targetMotifMatchCigarP75779MF_0065735) - STRLEN(REPLACE(?targetMotifMatchCigarP75779MF_0065735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), '')))), '[^-]', ''))) AS ?step246) . BIND(((?step246 + ?targetMotifMatchRegionMatchBeginPositionMF_0065736) - 1) AS ?thisPositionOn11) . BIND(?thisPositionOn11 AS ?thisPositionOn12) . BIND(?this AS ?pfs1t47) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfsb8) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfse9) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn11, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP75779MF_0065733, 1, (STRLEN(?templateMotifCigarP75779MF_0065733) - STRLEN(REPLACE(?templateMotifCigarP75779MF_0065733, CONCAT('^(?:-*[^-]){', STR(((98 - ?templateMotifSequenceMatchBeginPositionP7577934) + 1)), '}'), '')))), '[a-z]', '')) AS ?step148) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP75779MF_0065735, 1, (STRLEN(?targetMotifMatchCigarP75779MF_0065735) - STRLEN(REPLACE(?targetMotifMatchCigarP75779MF_0065735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP75779MF_0065735, 1, (STRLEN(?targetMotifMatchCigarP75779MF_0065735) - STRLEN(REPLACE(?targetMotifMatchCigarP75779MF_0065735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), '')))), '[^-]', ''))) AS ?step249) . BIND(((?step249 + ?targetMotifMatchRegionMatchBeginPositionMF_0065736) - 1) AS ?thisPositionOn17) . BIND(?thisPositionOn17 AS ?thisPositionOn18) . BIND(?this AS ?pfs1t50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn17, 1) = 'D')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP75779MF_0065733, 1, (STRLEN(?templateMotifCigarP75779MF_0065733) - STRLEN(REPLACE(?templateMotifCigarP75779MF_0065733, CONCAT('^(?:-*[^-]){', STR(((158 - ?templateMotifSequenceMatchBeginPositionP7577934) + 1)), '}'), '')))), '[a-z]', '')) AS ?step151) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP75779MF_0065735, 1, (STRLEN(?targetMotifMatchCigarP75779MF_0065735) - STRLEN(REPLACE(?targetMotifMatchCigarP75779MF_0065735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP75779MF_0065735, 1, (STRLEN(?targetMotifMatchCigarP75779MF_0065735) - STRLEN(REPLACE(?targetMotifMatchCigarP75779MF_0065735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), '')))), '[^-]', ''))) AS ?step252) . BIND(((?step252 + ?targetMotifMatchRegionMatchBeginPositionMF_0065736) - 1) AS ?thisPositionOn23) . BIND(?thisPositionOn23 AS ?thisPositionOn24) . BIND(?this AS ?pfs1t53) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfsb20) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfse21) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn23, 1) = 'H')) . BIND(?this AS ?pfs6) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch58 faldo:location ?templateMotifSequenceMatchRegionP7577959 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP7577961 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP75779MF_0065754 . ?templateMotifSequenceMatchRegionP7577959 faldo:begin ?templateMotifSequenceMatchBeginP7577960 . ?templateMotifSequenceMatchBeginP7577960 faldo:position ?templateMotifSequenceMatchBeginPositionP7577955 ; faldo:reference isoform:P75779-1 . ?templateMotifSequenceProfileAlignmentOperationP7577961 edam:has_input signature:MF_00657 ; rdf:type edam:operation_0300 . ?targetMotifMatch62 faldo:location ?targetMotifMatchRegionMatch63 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0065765 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP75779MF_0065756 . ?targetMotifMatchRegionMatch63 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0065764 . ?targetMotifMatchRegionMatchBeginMF_0065764 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0065757 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0065765 edam:has_input signature:MF_00657 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP75779MF_0065754, 1, (STRLEN(?templateMotifCigarP75779MF_0065754) - STRLEN(REPLACE(?templateMotifCigarP75779MF_0065754, CONCAT('^(?:-*[^-]){', STR(((168 - ?templateMotifSequenceMatchBeginPositionP7577955) + 1)), '}'), '')))), '[a-z]', '')) AS ?step166) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP75779MF_0065756, 1, (STRLEN(?targetMotifMatchCigarP75779MF_0065756) - STRLEN(REPLACE(?targetMotifMatchCigarP75779MF_0065756, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP75779MF_0065756, 1, (STRLEN(?targetMotifMatchCigarP75779MF_0065756) - STRLEN(REPLACE(?targetMotifMatchCigarP75779MF_0065756, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), '')))), '[^-]', ''))) AS ?step267) . BIND(((?step267 + ?targetMotifMatchRegionMatchBeginPositionMF_0065757) - 1) AS ?thisPositionOn30) . BIND(?thisPositionOn30 AS ?thisPositionOn31) . BIND(?this AS ?pfs2t68) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfsb27) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfse28) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn30, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00657a26')) AS ?annotation26) . BIND(?this AS ?pfs25) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag69) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag69, ?UNBOUND_VARIABLE) AS ?case0) . OPTIONAL { ?this a up:Protein . VALUES ?supertaxon70 {taxon:561 taxon:620 taxon:590} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon70 . BIND(?this AS ?case1) . BIND(URI(CONCAT(STR(?this), '#MF_00657a2')) AS ?name2) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon71 {taxon:561 taxon:620 taxon:590} ?thisOrganism rdfs:subClassOf+ ?supertaxon71 . })) . BIND(?this AS ?case3) . BIND(URI(CONCAT(STR(?this), '#MF_00657a4')) AS ?name4) . OPTIONAL { ?this up:encodedBy ?gene75 . ?gene75 up:locusName ?geneLocus73 . } OPTIONAL { ?this up:encodedBy ?gene75 . ?gene75 up:orfName ?geneOrf74 . } BIND(IF(BOUND(?geneLocus73), ?geneLocus73, ?geneOrf74) AS ?part72) . BIND(CONCAT('PKHD-type hydroxylase ', ?part72) AS ?nameValue5) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_00657 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00657#construct |