Home | Contact

Results

RDF/XMLNTriplesTurtleShow queryShare ◀ ▶
SubjectPredicateObject
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-64
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-84
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-15
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-14
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-23
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-49
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-10
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-44
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-66
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-47
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-86
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-40
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-12
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-85
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-83
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-61
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-88
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-42
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-19
http://purl.uniprot.org/unirules/MF_00717#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00717#construct-template-81
http://purl.uniprot.org/unirules/MF_00717#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_00717#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_00717#construct-where-list-0
http://purl.uniprot.org/unirules/MF_00717#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00717#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00717#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:265002 up:source unirule:MF_00717 . _:265003 up:source unirule:MF_00717 . _:265004 up:source unirule:MF_00717 . _:265005 up:source unirule:MF_00717 . _:265006 up:source unirule:MF_00717 . _:265007 up:source unirule:MF_00717 . _:265008 up:source unirule:MF_00717 . _:265009 up:source unirule:MF_00717 . _:265010 up:source unirule:MF_00717 . _:265011 up:source unirule:MF_00717 . _:265012 up:source unirule:MF_00717 . _:265013 up:source unirule:MF_00717 . _:265014 up:source unirule:MF_00717 . _:265015 up:source unirule:MF_00717 . _:265016 up:source unirule:MF_00717 . _:265017 up:source unirule:MF_00717 . _:265018 up:source unirule:MF_00717 . ?this up:annotation ?annotation2 , ?annotation3 ; up:classifiedWith GO:0015979 , keyword:1133 , keyword:472 , keyword:602 , keyword:604 , keyword:793 , keyword:812 ; up:recommendedName ?name0 . ?name0 up:fullName 'Photosystem II reaction center protein Y' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'psbY' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Loosely associated component of the core of photosystem II (PSII). PSII is a light-driven water plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating a proton gradient subsequently used for ATP formation.' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the PsbY family.' . ?case4 up:classifiedWith GO:0009535 . ?case5 up:classifiedWith GO:0042651 . ?pfs8 up:annotation ?annotation9 . ?annotation9 faldo:begin ?pfsb10 ; faldo:end ?pfse11 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Lumenal' . ?pfsb10 faldo:position ?thisPositionOn12 ; rdf:type faldo:ExactPosition . ?pfse11 faldo:position ?thisPositionOn13 ; rdf:type faldo:ExactPosition . ?pfs14 up:annotation ?annotation15 . ?annotation15 faldo:begin ?pfsb16 ; faldo:end ?pfse17 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb16 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?pfse17 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?pfs20 up:annotation ?annotation21 . ?annotation21 faldo:begin ?pfsb22 ; faldo:end ?pfse23 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Lumenal' . ?pfsb22 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse23 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?pfs26 up:annotation ?annotation27 . ?annotation27 faldo:begin ?pfsb28 ; faldo:end ?pfse29 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Stromal' . ?pfsb28 faldo:position ?thisPositionOn30 ; rdf:type faldo:ExactPosition . ?pfse29 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . _:265019 a rdf:Statement ; up:attribution _:265002 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:265020 a rdf:Statement ; up:attribution _:265003 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:265021 a rdf:Statement ; up:attribution _:265004 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:265022 a rdf:Statement ; up:attribution _:265005 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:265023 a rdf:Statement ; up:attribution _:265006 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:602 . _:265024 a rdf:Statement ; up:attribution _:265007 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:604 . _:265025 a rdf:Statement ; up:attribution _:265008 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:265026 a rdf:Statement ; up:attribution _:265009 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:265027 a rdf:Statement ; up:attribution _:265010 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:793 . _:265028 a rdf:Statement ; up:attribution _:265011 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . _:265029 a rdf:Statement ; up:attribution _:265012 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0015979 . _:265030 a rdf:Statement ; up:attribution _:265013 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object GO:0009535 . _:265031 a rdf:Statement ; up:attribution _:265014 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object GO:0042651 . _:265032 a rdf:Statement ; up:source unirule:MF_00717 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:265033 a rdf:Statement ; up:attribution _:265015 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:265034 a rdf:Statement ; up:source unirule:MF_00717 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:265035 a rdf:Statement ; up:attribution _:265016 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:265036 a rdf:Statement ; up:source unirule:MF_00717 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:265037 a rdf:Statement ; up:attribution _:265017 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:265038 a rdf:Statement ; up:source unirule:MF_00717 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:265039 a rdf:Statement ; up:attribution _:265018 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00717 #Rule MF_00717 Created by:? on:2005-02-28 Modified by:Andrea Auchincloss on:2023-07-27 { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00717 . ?thisOrganism rdfs:subClassOf+ taxon:1117 . } UNION { ?this rdfs:seeAlso signature:MF_00717 . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } UNION { ?this up:encodedIn up:Cyanelle . } UNION { ?this up:encodedIn up:Apicoplast . } UNION { ?this up:encodedIn up:Organellar_chromatophore . } UNION { ?this up:encodedIn up:Non-photosynthetic_plastid . } } BIND(URI(CONCAT(STR(?this), '#MF_00717a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00717a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00717a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch36 faldo:location ?templateMotifSequenceMatchRegionP7367637 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP7367639 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP73676MF_0071732 . ?templateMotifSequenceMatchRegionP7367637 faldo:begin ?templateMotifSequenceMatchBeginP7367638 . ?templateMotifSequenceMatchBeginP7367638 faldo:position ?templateMotifSequenceMatchBeginPositionP7367633 ; faldo:reference isoform:P73676-1 . ?templateMotifSequenceProfileAlignmentOperationP7367639 edam:has_input signature:MF_00717 ; rdf:type edam:operation_0300 . ?targetMotifMatch40 faldo:location ?targetMotifMatchRegionMatch41 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0071743 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP73676MF_0071734 . ?targetMotifMatchRegionMatch41 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0071742 . ?targetMotifMatchRegionMatchBeginMF_0071742 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0071735 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0071743 edam:has_input signature:MF_00717 ; rdf:type edam:operation_0300 . BIND(1 AS ?thisPositionOn12) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP73676MF_0071732, 1, (STRLEN(?templateMotifCigarP73676MF_0071732) - STRLEN(REPLACE(?templateMotifCigarP73676MF_0071732, CONCAT('^(?:-*[^-]){', STR(((4 - ?templateMotifSequenceMatchBeginPositionP7367633) + 1)), '}'), '')))), '[a-z]', '')) AS ?step144) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP73676MF_0071734, 1, (STRLEN(?targetMotifMatchCigarP73676MF_0071734) - STRLEN(REPLACE(?targetMotifMatchCigarP73676MF_0071734, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step144), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP73676MF_0071734, 1, (STRLEN(?targetMotifMatchCigarP73676MF_0071734) - STRLEN(REPLACE(?targetMotifMatchCigarP73676MF_0071734, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step144), '}'), '')))), '[^-]', ''))) AS ?step245) . BIND(((?step245 + ?targetMotifMatchRegionMatchBeginPositionMF_0071735) - 1) AS ?thisPositionOn13) . BIND(?this AS ?pfs1t46) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb10) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse11) . FILTER ((BOUND(?thisPositionOn12) && BOUND(?thisPositionOn13))) . BIND(URI(CONCAT(STR(?this), '#MF_00717a9')) AS ?annotation9) . BIND(?this AS ?pfs8) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch51 faldo:location ?templateMotifSequenceMatchRegionP7367652 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP7367654 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP73676MF_0071747 . ?templateMotifSequenceMatchRegionP7367652 faldo:begin ?templateMotifSequenceMatchBeginP7367653 . ?templateMotifSequenceMatchBeginP7367653 faldo:position ?templateMotifSequenceMatchBeginPositionP7367648 ; faldo:reference isoform:P73676-1 . ?templateMotifSequenceProfileAlignmentOperationP7367654 edam:has_input signature:MF_00717 ; rdf:type edam:operation_0300 . ?targetMotifMatch55 faldo:location ?targetMotifMatchRegionMatch56 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0071758 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP73676MF_0071749 . ?targetMotifMatchRegionMatch56 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0071757 . ?targetMotifMatchRegionMatchBeginMF_0071757 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0071750 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0071758 edam:has_input signature:MF_00717 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP73676MF_0071747, 1, (STRLEN(?templateMotifCigarP73676MF_0071747) - STRLEN(REPLACE(?templateMotifCigarP73676MF_0071747, CONCAT('^(?:-*[^-]){', STR(((5 - ?templateMotifSequenceMatchBeginPositionP7367648) + 1)), '}'), '')))), '[a-z]', '')) AS ?step159) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP73676MF_0071749, 1, (STRLEN(?targetMotifMatchCigarP73676MF_0071749) - STRLEN(REPLACE(?targetMotifMatchCigarP73676MF_0071749, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step159), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP73676MF_0071749, 1, (STRLEN(?targetMotifMatchCigarP73676MF_0071749) - STRLEN(REPLACE(?targetMotifMatchCigarP73676MF_0071749, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step159), '}'), '')))), '[^-]', ''))) AS ?step260) . BIND(((?step260 + ?targetMotifMatchRegionMatchBeginPositionMF_0071750) - 1) AS ?thisPositionOn18) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP73676MF_0071747, 1, (STRLEN(?templateMotifCigarP73676MF_0071747) - STRLEN(REPLACE(?templateMotifCigarP73676MF_0071747, CONCAT('^(?:-*[^-]){', STR(((23 - ?templateMotifSequenceMatchBeginPositionP7367648) + 1)), '}'), '')))), '[a-z]', '')) AS ?step161) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP73676MF_0071749, 1, (STRLEN(?targetMotifMatchCigarP73676MF_0071749) - STRLEN(REPLACE(?targetMotifMatchCigarP73676MF_0071749, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step161), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP73676MF_0071749, 1, (STRLEN(?targetMotifMatchCigarP73676MF_0071749) - STRLEN(REPLACE(?targetMotifMatchCigarP73676MF_0071749, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step161), '}'), '')))), '[^-]', ''))) AS ?step262) . BIND(((?step262 + ?targetMotifMatchRegionMatchBeginPositionMF_0071750) - 1) AS ?thisPositionOn19) . BIND(?this AS ?pfs1t63) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb16) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse17) . FILTER ((BOUND(?thisPositionOn18) && BOUND(?thisPositionOn19))) . BIND(URI(CONCAT(STR(?this), '#MF_00717a15')) AS ?annotation15) . BIND(?this AS ?pfs14) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch68 faldo:location ?templateMotifSequenceMatchRegionP7367669 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP7367671 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP73676MF_0071764 . ?templateMotifSequenceMatchRegionP7367669 faldo:begin ?templateMotifSequenceMatchBeginP7367670 . ?templateMotifSequenceMatchBeginP7367670 faldo:position ?templateMotifSequenceMatchBeginPositionP7367665 ; faldo:reference isoform:P73676-1 . ?templateMotifSequenceProfileAlignmentOperationP7367671 edam:has_input signature:MF_00717 ; rdf:type edam:operation_0300 . ?targetMotifMatch72 faldo:location ?targetMotifMatchRegionMatch73 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0071775 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP73676MF_0071766 . ?targetMotifMatchRegionMatch73 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0071774 . ?targetMotifMatchRegionMatchBeginMF_0071774 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0071767 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0071775 edam:has_input signature:MF_00717 ; rdf:type edam:operation_0300 . FILTER (! (EXISTS { { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } })) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP73676MF_0071764, 1, (STRLEN(?templateMotifCigarP73676MF_0071764) - STRLEN(REPLACE(?templateMotifCigarP73676MF_0071764, CONCAT('^(?:-*[^-]){', STR(((24 - ?templateMotifSequenceMatchBeginPositionP7367665) + 1)), '}'), '')))), '[a-z]', '')) AS ?step176) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP73676MF_0071766, 1, (STRLEN(?targetMotifMatchCigarP73676MF_0071766) - STRLEN(REPLACE(?targetMotifMatchCigarP73676MF_0071766, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step176), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP73676MF_0071766, 1, (STRLEN(?targetMotifMatchCigarP73676MF_0071766) - STRLEN(REPLACE(?targetMotifMatchCigarP73676MF_0071766, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step176), '}'), '')))), '[^-]', ''))) AS ?step277) . BIND(((?step277 + ?targetMotifMatchRegionMatchBeginPositionMF_0071767) - 1) AS ?thisPositionOn24) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn25) . BIND(?this AS ?pfs2t78) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb22) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse23) . FILTER ((BOUND(?thisPositionOn24) && BOUND(?thisPositionOn25))) . BIND(URI(CONCAT(STR(?this), '#MF_00717a21')) AS ?annotation21) . BIND(?this AS ?pfs20) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch83 faldo:location ?templateMotifSequenceMatchRegionP7367684 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP7367686 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP73676MF_0071779 . ?templateMotifSequenceMatchRegionP7367684 faldo:begin ?templateMotifSequenceMatchBeginP7367685 . ?templateMotifSequenceMatchBeginP7367685 faldo:position ?templateMotifSequenceMatchBeginPositionP7367680 ; faldo:reference isoform:P73676-1 . ?templateMotifSequenceProfileAlignmentOperationP7367686 edam:has_input signature:MF_00717 ; rdf:type edam:operation_0300 . ?targetMotifMatch87 faldo:location ?targetMotifMatchRegionMatch88 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0071790 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP73676MF_0071781 . ?targetMotifMatchRegionMatch88 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0071789 . ?targetMotifMatchRegionMatchBeginMF_0071789 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0071782 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0071790 edam:has_input signature:MF_00717 ; rdf:type edam:operation_0300 . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP73676MF_0071779, 1, (STRLEN(?templateMotifCigarP73676MF_0071779) - STRLEN(REPLACE(?templateMotifCigarP73676MF_0071779, CONCAT('^(?:-*[^-]){', STR(((24 - ?templateMotifSequenceMatchBeginPositionP7367680) + 1)), '}'), '')))), '[a-z]', '')) AS ?step191) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP73676MF_0071781, 1, (STRLEN(?targetMotifMatchCigarP73676MF_0071781) - STRLEN(REPLACE(?targetMotifMatchCigarP73676MF_0071781, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step191), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP73676MF_0071781, 1, (STRLEN(?targetMotifMatchCigarP73676MF_0071781) - STRLEN(REPLACE(?targetMotifMatchCigarP73676MF_0071781, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step191), '}'), '')))), '[^-]', ''))) AS ?step292) . BIND(((?step292 + ?targetMotifMatchRegionMatchBeginPositionMF_0071782) - 1) AS ?thisPositionOn30) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn31) . BIND(?this AS ?pfs3t93) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfsb28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfse29) . FILTER ((BOUND(?thisPositionOn30) && BOUND(?thisPositionOn31))) . BIND(URI(CONCAT(STR(?this), '#MF_00717a27')) AS ?annotation27) . BIND(?this AS ?pfs26) . } OPTIONAL { ?this a up:Protein . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } BIND(?this AS ?case4) . } OPTIONAL { ?this a up:Protein . FILTER (! (EXISTS { { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } })) . BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1117 . BIND(?this AS ?case6) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1117 . })) . BIND(?this AS ?case7) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_00717http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00717#construct
◀ ▶