| http://purl.uniprot.org/unirules/MF_01110#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:386497 up:source unirule:MF_01110 .
_:386498 up:source unirule:MF_01110 .
_:386499 up:source unirule:MF_01110 .
_:386500 up:source unirule:MF_01110 .
_:386501 up:source unirule:MF_01110 .
_:386502 up:source unirule:MF_01110 .
_:386503 up:source unirule:MF_01110 .
_:386504 up:source unirule:MF_01110 .
_:386505 up:source unirule:MF_01110 .
_:386506 up:source unirule:MF_01110 .
_:386507 up:source unirule:MF_01110 .
_:386508 up:source unirule:MF_01110 .
_:386509 up:source unirule:MF_01110 .
_:386510 up:source unirule:MF_01110 .
_:386511 up:source unirule:MF_01110 .
_:386512 up:source unirule:MF_01110 .
_:386513 up:source unirule:MF_01110 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation7 ,
?annotation9 ;
up:classifiedWith GO:0003942 ,
GO:0005737 ,
GO:0006526 ,
keyword:28 ,
keyword:521 ,
keyword:55 ,
keyword:560 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '1.2.1.38' ;
up:fullName 'N-acetyl-gamma-glutamyl-phosphate reductase' ;
up:shortName 'AGPR' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'N-acetyl-glutamate semialdehyde dehydrogenase' ;
up:shortName 'NAGSA dehydrogenase' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'argC' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde.' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 a up:Pathway_Annotation ;
rdfs:comment 'Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 3/4.' .
?annotation7 a up:Subcellular_Location_Annotation .
?annotation7li8 up:cellularComponent .
?annotation9 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.' .
?pfs10 up:annotation ?annotation11 .
?annotation11 faldo:begin ?pfsb12 ;
faldo:end ?pfse13 ;
rdf:type up:Active_Site_Annotation .
?pfsb12 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
?pfse13 faldo:position ?thisPositionOn15 ;
rdf:type faldo:ExactPosition .
_:386514 a rdf:Statement ;
up:attribution _:386497 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:386515 a rdf:Statement ;
up:attribution _:386498 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:386516 a rdf:Statement ;
up:attribution _:386499 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:386517 a rdf:Statement ;
up:attribution _:386500 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:386518 a rdf:Statement ;
up:attribution _:386501 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:386519 a rdf:Statement ;
up:attribution _:386502 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:386520 a rdf:Statement ;
up:attribution _:386503 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:386521 a rdf:Statement ;
up:attribution _:386504 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:386522 a rdf:Statement ;
up:attribution _:386505 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:386523 a rdf:Statement ;
up:attribution _:386506 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:28 .
_:386524 a rdf:Statement ;
up:attribution _:386507 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:55 .
_:386525 a rdf:Statement ;
up:attribution _:386508 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:560 .
_:386526 a rdf:Statement ;
up:attribution _:386509 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:521 .
_:386527 a rdf:Statement ;
up:attribution _:386510 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0003942 .
_:386528 a rdf:Statement ;
up:attribution _:386511 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006526 .
_:386529 a rdf:Statement ;
up:attribution _:386512 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:386530 a rdf:Statement ;
up:source unirule:MF_01110 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:386531 a rdf:Statement ;
up:attribution _:386513 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01110
#Rule MF_01110 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2024-11-05
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01110 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_01110a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01110a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01110a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01110a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01110a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01110a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_01110a9')) AS ?annotation9) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch20 faldo:location ?templateMotifSequenceMatchRegionQ9RY7221 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9RY7223 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9RY72MF_0111016 .
?templateMotifSequenceMatchRegionQ9RY7221 faldo:begin ?templateMotifSequenceMatchBeginQ9RY7222 .
?templateMotifSequenceMatchBeginQ9RY7222 faldo:position ?templateMotifSequenceMatchBeginPositionQ9RY7217 ;
faldo:reference isoform:Q9RY72-1 .
?templateMotifSequenceProfileAlignmentOperationQ9RY7223 edam:has_input signature:MF_01110 ;
rdf:type edam:operation_0300 .
?targetMotifMatch24 faldo:location ?targetMotifMatchRegionMatch25 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0111027 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9RY72MF_0111018 .
?targetMotifMatchRegionMatch25 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0111026 .
?targetMotifMatchRegionMatchBeginMF_0111026 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0111019 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0111027 edam:has_input signature:MF_01110 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9RY72MF_0111016, 1, (STRLEN(?templateMotifCigarQ9RY72MF_0111016) - STRLEN(REPLACE(?templateMotifCigarQ9RY72MF_0111016, CONCAT('^(?:-*[^-]){', STR(((117 - ?templateMotifSequenceMatchBeginPositionQ9RY7217) + 1)), '}'), '')))), '[a-z]', '')) AS ?step128) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9RY72MF_0111018, 1, (STRLEN(?targetMotifMatchCigarQ9RY72MF_0111018) - STRLEN(REPLACE(?targetMotifMatchCigarQ9RY72MF_0111018, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step128), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9RY72MF_0111018, 1, (STRLEN(?targetMotifMatchCigarQ9RY72MF_0111018) - STRLEN(REPLACE(?targetMotifMatchCigarQ9RY72MF_0111018, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step128), '}'), '')))), '[^-]', ''))) AS ?step229) .
BIND(((?step229 + ?targetMotifMatchRegionMatchBeginPositionMF_0111019) - 1) AS ?thisPositionOn14) .
BIND(?thisPositionOn14 AS ?thisPositionOn15) .
BIND(?this AS ?pfs1t30) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfsb12) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfse13) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn14, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_01110a11')) AS ?annotation11) .
BIND(?this AS ?pfs10) .
}
}
"xsd:string |
